RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 C2orf88Q9BSF0 95 aa6.79□□□□□ -1.32
LRRC28-221ENST00000561276 DNAH6Q9C0G6 4158 aa6.79□□□□□ -1.32
LRRC28-221ENST00000561276 ATP5LO75964 103 aa6.78□□□□□ -1.32
LRRC28-221ENST00000561276 UBE2D1P51668 147 aa6.78□□□□□ -1.32
LRRC28-221ENST00000561276 FOXI1Q12951 378 aa6.78□□□□□ -1.32
LRRC28-221ENST00000561276 WFDC2Q14508 124 aa6.78□□□□□ -1.32
LRRC28-221ENST00000561276 LINC00242Q5T6M2 205 aa6.78□□□□□ -1.32
LRRC28-221ENST00000561276 CST9LQ9H4G1 147 aa6.78□□□□□ -1.32
LRRC28-221ENST00000561276 RYR3Q15413 4870 aa6.78□□□□□ -1.32
LRRC28-221ENST00000561276 A0A1B0GVY2 172 aa6.77□□□□□ -1.33
LRRC28-221ENST00000561276 PRSS1P07477 247 aa6.77□□□□□ -1.33
LRRC28-221ENST00000561276 COX6A2Q02221 97 aa6.77□□□□□ -1.33
LRRC28-221ENST00000561276 PMVKQ15126 192 aa6.77□□□□□ -1.33
LRRC28-221ENST00000561276 IFI27L1Q96BM0 104 aa6.77□□□□□ -1.33
LRRC28-221ENST00000561276 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
LRRC28-221ENST00000561276 IGHV3OR16-9A0A0B4J2B5 98 aa6.76□□□□□ -1.33
LRRC28-221ENST00000561276 USP17L23D6RBM5 183 aa6.76□□□□□ -1.33
LRRC28-221ENST00000561276 LEPROTL1O95214 131 aa6.76□□□□□ -1.33
LRRC28-221ENST00000561276 FABP4P15090 132 aa6.76□□□□□ -1.33
LRRC28-221ENST00000561276 COA6Q5JTJ3 125 aaKnown RBP6.76□□□□□ -1.33
LRRC28-221ENST00000561276 FAM19A3Q7Z5A8 133 aa6.76□□□□□ -1.33
LRRC28-221ENST00000561276 C5orf38Q86SI9 138 aa6.76□□□□□ -1.33
LRRC28-221ENST00000561276 A0A0J9YXV3 536 aa6.75□□□□□ -1.33
LRRC28-221ENST00000561276 COX7A2LO14548 114 aa6.75□□□□□ -1.33
LRRC28-221ENST00000561276 SEC11AP67812 179 aa6.75□□□□□ -1.33
LRRC28-221ENST00000561276 CFAP161Q6P656 301 aa6.75□□□□□ -1.33
LRRC28-221ENST00000561276 Q8N814 137 aa6.75□□□□□ -1.33
LRRC28-221ENST00000561276 MALP21145 153 aa6.74□□□□□ -1.33
LRRC28-221ENST00000561276 KRTAP10-2P60368 255 aa6.74□□□□□ -1.33
LRRC28-221ENST00000561276 C14orf177Q52M58 125 aa6.74□□□□□ -1.33
LRRC28-221ENST00000561276 CDPF1Q6NVV7 123 aa6.74□□□□□ -1.33
LRRC28-221ENST00000561276 SPATA12Q7Z6I5 190 aa6.74□□□□□ -1.33
LRRC28-221ENST00000561276 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-221ENST00000561276 TINCRA0A1B0GVN0 87 aa6.73□□□□□ -1.33
LRRC28-221ENST00000561276 hDV102S1A0JD36 115 aa6.73□□□□□ -1.33
LRRC28-221ENST00000561276 FUSP35637 526 aaKnown RBP eCLIP6.73□□□□□ -1.33
LRRC28-221ENST00000561276 HERVK_113P63121 156 aa6.73□□□□□ -1.33
LRRC28-221ENST00000561276 C15orf56Q8N910 161 aa6.73□□□□□ -1.33
LRRC28-221ENST00000561276 GEMIN7Q9H840 131 aaKnown RBP6.73□□□□□ -1.33
LRRC28-221ENST00000561276 HSPB8Q9UJY1 196 aa6.73□□□□□ -1.33
LRRC28-221ENST00000561276 DNAH10Q8IVF4 4471 aa6.72□□□□□ -1.33
LRRC28-221ENST00000561276 A0A087WZ39 114 aa6.72□□□□□ -1.33
LRRC28-221ENST00000561276 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
LRRC28-221ENST00000561276 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
LRRC28-221ENST00000561276 APOMO95445 188 aa6.72□□□□□ -1.33
LRRC28-221ENST00000561276 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
LRRC28-221ENST00000561276 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
LRRC28-221ENST00000561276 DNAH17Q9UFH2 4485 aa6.71□□□□□ -1.33
LRRC28-221ENST00000561276 TRAV12-1A0A0B4J245 112 aa6.71□□□□□ -1.34
LRRC28-221ENST00000561276 H0Y8G0 127 aa6.71□□□□□ -1.34
LRRC28-221ENST00000561276 S100A6P06703 90 aa6.71□□□□□ -1.34
LRRC28-221ENST00000561276 IGLC3P0DOY3 106 aa6.71□□□□□ -1.34
LRRC28-221ENST00000561276 MAP1LC3CQ9BXW4 147 aa6.71□□□□□ -1.34
LRRC28-221ENST00000561276 CHTOPQ9Y3Y2 248 aaKnown RBP6.71□□□□□ -1.34
LRRC28-221ENST00000561276 FRAS1Q86XX4 4008 aa6.71□□□□□ -1.34
LRRC28-221ENST00000561276 IGLV4-69A0A075B6H9 119 aa6.7□□□□□ -1.34
LRRC28-221ENST00000561276 IGHV3-64A0A075B6Q5 118 aa6.7□□□□□ -1.34
LRRC28-221ENST00000561276 GVQW2A0A096LPI5 108 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-221ENST00000561276 IGLV5-52A0A0A0MRZ9 124 aa6.7□□□□□ -1.34
LRRC28-221ENST00000561276 ZNF561-AS1K7EIQ3 104 aa6.7□□□□□ -1.34
LRRC28-221ENST00000561276 SLPIP03973 132 aa6.7□□□□□ -1.34
LRRC28-221ENST00000561276 LINC00469Q8N7U9 141 aa6.7□□□□□ -1.34
LRRC28-221ENST00000561276 NTN5Q8WTR8 489 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-221ENST00000561276 LINC00526Q96FQ7 95 aa6.7□□□□□ -1.34
LRRC28-221ENST00000561276 PKD1P98161 4303 aa6.7□□□□□ -1.34
LRRC28-221ENST00000561276 IGLV5-45A0A087WSX0 123 aa6.69□□□□□ -1.34
LRRC28-221ENST00000561276 SNRPEP62304 92 aaKnown RBP6.69□□□□□ -1.34
LRRC28-221ENST00000561276 LINC01561Q8N1V8 128 aa6.69□□□□□ -1.34
LRRC28-221ENST00000561276 OR10D4PQ8NGN7 298 aa6.69□□□□□ -1.34
LRRC28-221ENST00000561276 ORAOV1Q8WV07 137 aa6.69□□□□□ -1.34
LRRC28-221ENST00000561276 PACRGQ96M98 296 aaPredicted RBP6.69□□□□□ -1.34
LRRC28-221ENST00000561276 KRTAP4-12Q9BQ66 201 aa6.69□□□□□ -1.34
LRRC28-221ENST00000561276 CHAC1Q9BUX1 264 aa6.69□□□□□ -1.34
LRRC28-221ENST00000561276 MRPL35Q9NZE8 188 aaKnown RBP6.69□□□□□ -1.34
LRRC28-221ENST00000561276 C11orf86A6NJI1 115 aa6.68□□□□□ -1.34
LRRC28-221ENST00000561276 C16orf90A8MZG2 172 aa6.68□□□□□ -1.34
LRRC28-221ENST00000561276 F8VRH5 84 aa6.68□□□□□ -1.34
LRRC28-221ENST00000561276 ODF1Q14990 250 aa6.68□□□□□ -1.34
LRRC28-221ENST00000561276 HIST3H2BBQ8N257 126 aa6.68□□□□□ -1.34
LRRC28-221ENST00000561276 FAT2Q9NYQ8 4349 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-221ENST00000561276 H3BRM9 83 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 SYS1-DBNDD2H3BUS1 97 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 ZNF22P17026 224 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-221ENST00000561276 GCSHP23434 173 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 S100A2P29034 98 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 CNBPP62633 177 aaKnown RBP6.67□□□□□ -1.34
LRRC28-221ENST00000561276 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 KIAA0087Q14695 138 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 LINC01620Q4KN68 170 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 TMEM170BQ5T4T1 132 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 LCE3BQ5TA77 95 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 C9orf163Q8N9P6 203 aa6.67□□□□□ -1.34
LRRC28-221ENST00000561276 C5orf52A6NGY3 159 aa6.66□□□□□ -1.34
LRRC28-221ENST00000561276 SMIM1B2RUZ4 78 aa6.66□□□□□ -1.34
LRRC28-221ENST00000561276 SPINK8P0C7L1 97 aa6.66□□□□□ -1.34
LRRC28-221ENST00000561276 SYCNQ0VAF6 134 aa6.66□□□□□ -1.34
LRRC28-221ENST00000561276 C6orf226Q5I0X4 101 aa6.66□□□□□ -1.34
LRRC28-221ENST00000561276 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms