RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 AMELXQ99217 191 aa7.06□□□□□ -1.28
TPM1-229ENST00000561242 CHTOPQ9Y3Y2 248 aaKnown RBP7.06□□□□□ -1.28
TPM1-229ENST00000561242 STARD9Q9P2P6 4700 aa7.06□□□□□ -1.28
TPM1-229ENST00000561242 IGLV4-69A0A075B6H9 119 aa7.05□□□□□ -1.28
TPM1-229ENST00000561242 A0A1B0GVY2 172 aa7.05□□□□□ -1.28
TPM1-229ENST00000561242 SERF1AO75920 110 aa7.05□□□□□ -1.28
TPM1-229ENST00000561242 S100A2P29034 98 aa7.05□□□□□ -1.28
TPM1-229ENST00000561242 LINC01561Q8N1V8 128 aa7.05□□□□□ -1.28
TPM1-229ENST00000561242 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
TPM1-229ENST00000561242 MAPKAPK5-AS1Q8N8E1 139 aa7.05□□□□□ -1.28
TPM1-229ENST00000561242 CARD19Q96LW7 228 aa7.05□□□□□ -1.28
TPM1-229ENST00000561242 A0A087WZ39 114 aa7.04□□□□□ -1.28
TPM1-229ENST00000561242 A0A0J9YXV3 536 aa7.04□□□□□ -1.28
TPM1-229ENST00000561242 KRTAP10-2P60368 255 aa7.04□□□□□ -1.28
TPM1-229ENST00000561242 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
TPM1-229ENST00000561242 LINC00474Q9P2X8 69 aa7.04□□□□□ -1.28
TPM1-229ENST00000561242 ALMS1Q8TCU4 4167 aa7.03□□□□□ -1.28
TPM1-229ENST00000561242 CSMD3Q7Z407 3707 aa7.03□□□□□ -1.28
TPM1-229ENST00000561242 GVQW2A0A096LPI5 108 aaPredicted RBP7.03□□□□□ -1.28
TPM1-229ENST00000561242 C20orf202A1L168 122 aa7.03□□□□□ -1.28
TPM1-229ENST00000561242 HERVK_113P61574 105 aa7.03□□□□□ -1.28
TPM1-229ENST00000561242 ZC2HC1BQ5TFG8 222 aa7.03□□□□□ -1.28
TPM1-229ENST00000561242 C2orf48Q96LS8 159 aa7.03□□□□□ -1.28
TPM1-229ENST00000561242 IGHV3OR16-9A0A0B4J2B5 98 aa7.02□□□□□ -1.29
TPM1-229ENST00000561242 CXCL5P42830 114 aa7.02□□□□□ -1.29
TPM1-229ENST00000561242 AKR1D1P51857 326 aa7.02□□□□□ -1.29
TPM1-229ENST00000561242 CNBPP62633 177 aaKnown RBP7.02□□□□□ -1.29
TPM1-229ENST00000561242 WFDC2Q14508 124 aa7.02□□□□□ -1.29
TPM1-229ENST00000561242 PDZD11Q5EBL8 140 aa7.02□□□□□ -1.29
TPM1-229ENST00000561242 C9orf163Q8N9P6 203 aa7.02□□□□□ -1.29
TPM1-229ENST00000561242 CHAC1Q9BUX1 264 aa7.02□□□□□ -1.29
TPM1-229ENST00000561242 TRAV12-1A0A0B4J245 112 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 LOC107984640A0A0U1RRK4 108 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST1H2BKO60814 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST1H2BJP06899 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST1H2BOP23527 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST1H2BBP33778 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST1H2BDP58876 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST1H2BCP62807 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST2H2BEQ16778 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.01□□□□□ -1.29
TPM1-229ENST00000561242 KRTAP26-1Q6PEX3 210 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 SFTA2Q6UW10 78 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST1H2BHQ93079 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST1H2BNQ99877 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 HIST1H2BMQ99879 126 aa7.01□□□□□ -1.29
TPM1-229ENST00000561242 KMT2CQ8NEZ4 4911 aaKnown RBP7□□□□□ -1.29
TPM1-229ENST00000561242 PLNP26678 52 aa7□□□□□ -1.29
TPM1-229ENST00000561242 COX6A2Q02221 97 aa7□□□□□ -1.29
TPM1-229ENST00000561242 RPL18AQ02543 176 aaKnown RBP7□□□□□ -1.29
TPM1-229ENST00000561242 C15orf56Q8N910 161 aa7□□□□□ -1.29
TPM1-229ENST00000561242 CDKN2A-AS1Q9UH64 79 aa7□□□□□ -1.29
TPM1-229ENST00000561242 F8VRH5 84 aa6.99□□□□□ -1.29
TPM1-229ENST00000561242 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
TPM1-229ENST00000561242 GAGE2BQ13066 116 aa6.99□□□□□ -1.29
TPM1-229ENST00000561242 FAM19A3Q7Z5A8 133 aa6.99□□□□□ -1.29
TPM1-229ENST00000561242 Q8IZM0 81 aa6.99□□□□□ -1.29
TPM1-229ENST00000561242 COX7B2Q8TF08 81 aa6.99□□□□□ -1.29
TPM1-229ENST00000561242 LINC00526Q96FQ7 95 aa6.99□□□□□ -1.29
TPM1-229ENST00000561242 URB1-AS1Q96HZ7 61 aa6.99□□□□□ -1.29
TPM1-229ENST00000561242 RYR3Q15413 4870 aa6.98□□□□□ -1.29
TPM1-229ENST00000561242 IGKV2-24A0A0C4DH68 120 aa6.98□□□□□ -1.29
TPM1-229ENST00000561242 CDK2AP2O75956 126 aa6.98□□□□□ -1.29
TPM1-229ENST00000561242 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
TPM1-229ENST00000561242 IGLC3P0DOY3 106 aa6.98□□□□□ -1.29
TPM1-229ENST00000561242 RNF151Q2KHN1 245 aa6.98□□□□□ -1.29
TPM1-229ENST00000561242 MAJINQ3KP22 176 aa6.98□□□□□ -1.29
TPM1-229ENST00000561242 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
TPM1-229ENST00000561242 LINC00587B1AMM8 73 aa6.97□□□□□ -1.29
TPM1-229ENST00000561242 DPM2O94777 84 aa6.97□□□□□ -1.29
TPM1-229ENST00000561242 KRTDAPP60985 99 aa6.97□□□□□ -1.29
TPM1-229ENST00000561242 LINC01620Q4KN68 170 aa6.97□□□□□ -1.29
TPM1-229ENST00000561242 LINC00173Q6ZV60 143 aa6.97□□□□□ -1.29
TPM1-229ENST00000561242 MRPL35Q9NZE8 188 aaKnown RBP6.97□□□□□ -1.29
TPM1-229ENST00000561242 DYNC2H1Q8NCM8 4307 aaKnown RBP6.96□□□□□ -1.3
TPM1-229ENST00000561242 IGKCP01834 107 aa6.96□□□□□ -1.3
TPM1-229ENST00000561242 KRTAP10-1P60331 282 aa6.96□□□□□ -1.3
TPM1-229ENST00000561242 Q6ZRU5 148 aa6.96□□□□□ -1.3
TPM1-229ENST00000561242 C7orf33Q8WU49 177 aa6.96□□□□□ -1.3
TPM1-229ENST00000561242 A0A096LNJ9 63 aa6.95□□□□□ -1.3
TPM1-229ENST00000561242 UNQ6190/PRO20217Q6UXQ8 127 aa6.95□□□□□ -1.3
TPM1-229ENST00000561242 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
TPM1-229ENST00000561242 GAGE2EQ4V326 116 aa6.94□□□□□ -1.3
TPM1-229ENST00000561242 PET117Q6UWS5 81 aa6.94□□□□□ -1.3
TPM1-229ENST00000561242 FAM104AQ969W3 186 aa6.94□□□□□ -1.3
TPM1-229ENST00000561242 PLEKHB2Q96CS7 222 aa6.94□□□□□ -1.3
TPM1-229ENST00000561242 GAGE2DQ9UEU5 116 aa6.94□□□□□ -1.3
TPM1-229ENST00000561242 PLECQ15149 4684 aaKnown RBP6.94□□□□□ -1.3
TPM1-229ENST00000561242 IGLV5-45A0A087WSX0 123 aa6.93□□□□□ -1.3
TPM1-229ENST00000561242 MYMXA0A1B0GTQ4 84 aa6.93□□□□□ -1.3
TPM1-229ENST00000561242 C11orf86A6NJI1 115 aa6.93□□□□□ -1.3
TPM1-229ENST00000561242 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
TPM1-229ENST00000561242 HSBP1L1C9JCN9 74 aa6.93□□□□□ -1.3
TPM1-229ENST00000561242 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
TPM1-229ENST00000561242 ZNF22P17026 224 aaPredicted RBP6.93□□□□□ -1.3
TPM1-229ENST00000561242 CIRBPQ14011 172 aaKnown RBP6.93□□□□□ -1.3
TPM1-229ENST00000561242 MEIG1Q5JSS6 88 aa6.93□□□□□ -1.3
TPM1-229ENST00000561242 SDIM1Q6ZPB5 146 aa6.93□□□□□ -1.3
TPM1-229ENST00000561242 STPG4Q8N801 248 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms