RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 AMN1Q8IY45 258 aa10.95□□□□□ -0.66
TPM1-226ENST00000560959 PPP1R2P9O14990 202 aa10.94□□□□□ -0.66
TPM1-226ENST00000560959 NRACQ8N912 160 aa10.94□□□□□ -0.66
TPM1-226ENST00000560959 HIGD1CA8MV81 97 aa10.93□□□□□ -0.66
TPM1-226ENST00000560959 RGS21Q2M5E4 152 aa10.93□□□□□ -0.66
TPM1-226ENST00000560959 TRBV30A0A0K0K1B3 111 aa10.92□□□□□ -0.66
TPM1-226ENST00000560959 TMEM250H0YL14 139 aa10.92□□□□□ -0.66
TPM1-226ENST00000560959 TCAPO15273 167 aa10.92□□□□□ -0.66
TPM1-226ENST00000560959 NUPR1O60356 82 aa10.92□□□□□ -0.66
TPM1-226ENST00000560959 BATF3Q9NR55 127 aa10.92□□□□□ -0.66
TPM1-226ENST00000560959 MUC17Q685J3 4493 aa10.92□□□□□ -0.66
TPM1-226ENST00000560959 NDUFC2-KCTD14E9PQ53 114 aa10.91□□□□□ -0.66
TPM1-226ENST00000560959 MRPS36P82909 103 aaKnown RBP10.91□□□□□ -0.66
TPM1-226ENST00000560959 KIAA0087Q14695 138 aa10.91□□□□□ -0.66
TPM1-226ENST00000560959 FAM104AQ969W3 186 aa10.91□□□□□ -0.66
TPM1-226ENST00000560959 SMKR1H3BMG3 65 aa10.9□□□□□ -0.66
TPM1-226ENST00000560959 C9orf129Q5T035 196 aaKnown RBP10.9□□□□□ -0.66
TPM1-226ENST00000560959 SPANXA1Q9NS26 97 aa10.9□□□□□ -0.66
TPM1-226ENST00000560959 RPL32P62910 135 aaKnown RBP10.89□□□□□ -0.67
TPM1-226ENST00000560959 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
TPM1-226ENST00000560959 CRYGAP11844 174 aa10.88□□□□□ -0.67
TPM1-226ENST00000560959 RIGQ13278 110 aa10.88□□□□□ -0.67
TPM1-226ENST00000560959 TYMSOSQ8TAI1 123 aa10.88□□□□□ -0.67
TPM1-226ENST00000560959 TRBV24-1A0A075B6N3 115 aa10.87□□□□□ -0.67
TPM1-226ENST00000560959 A0A087X002 238 aa10.87□□□□□ -0.67
TPM1-226ENST00000560959 LINC00862A6NCI5 91 aa10.87□□□□□ -0.67
TPM1-226ENST00000560959 HBBP68871 147 aa10.87□□□□□ -0.67
TPM1-226ENST00000560959 TGIF2-C20orf24A0A0A6YYL0 155 aa10.86□□□□□ -0.67
TPM1-226ENST00000560959 RPL39P62891 51 aaKnown RBP10.86□□□□□ -0.67
TPM1-226ENST00000560959 PACRGQ96M98 296 aaPredicted RBP10.86□□□□□ -0.67
TPM1-226ENST00000560959 IFITM10A6NMD0 228 aa10.85□□□□□ -0.67
TPM1-226ENST00000560959 TPRXLQ17RH7 258 aa10.85□□□□□ -0.67
TPM1-226ENST00000560959 LBHQ53QV2 105 aaPredicted RBP10.85□□□□□ -0.67
TPM1-226ENST00000560959 OSTCQ9NRP0 149 aa10.85□□□□□ -0.67
TPM1-226ENST00000560959 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
TPM1-226ENST00000560959 FAM104BQ5XKR9 115 aa10.84□□□□□ -0.67
TPM1-226ENST00000560959 CTDSP1Q9GZU7 261 aa10.84□□□□□ -0.67
TPM1-226ENST00000560959 C22orf24Q9Y442 160 aa10.84□□□□□ -0.67
TPM1-226ENST00000560959 CTAG1AP78358 180 aa10.83□□□□□ -0.68
TPM1-226ENST00000560959 MRPL51Q4U2R6 128 aaKnown RBP10.83□□□□□ -0.68
TPM1-226ENST00000560959 LINC01551Q86U37 167 aa10.83□□□□□ -0.68
TPM1-226ENST00000560959 LINC01561Q8N1V8 128 aa10.83□□□□□ -0.68
TPM1-226ENST00000560959 CDIP1Q9H305 208 aa10.83□□□□□ -0.68
TPM1-226ENST00000560959 C2orf82Q6UX34 121 aa10.82□□□□□ -0.68
TPM1-226ENST00000560959 SLC51BQ86UW2 128 aa10.82□□□□□ -0.68
TPM1-226ENST00000560959 TP73-AS1Q9UF72 201 aa10.81□□□□□ -0.68
TPM1-226ENST00000560959 ZNF727A8MUV8 499 aa10.8□□□□□ -0.68
TPM1-226ENST00000560959 BCE1O60756 84 aa10.8□□□□□ -0.68
TPM1-226ENST00000560959 LINC00242Q5T6M2 205 aa10.8□□□□□ -0.68
TPM1-226ENST00000560959 SMIM2Q9BVW6 85 aa10.79□□□□□ -0.68
TPM1-226ENST00000560959 PYGO1Q9Y3Y4 419 aa10.79□□□□□ -0.68
TPM1-226ENST00000560959 V9GYV3 84 aa10.79□□□□□ -0.68
TPM1-226ENST00000560959 TNFRSF6BO95407 300 aa10.78□□□□□ -0.68
TPM1-226ENST00000560959 CKS2P33552 79 aa10.78□□□□□ -0.68
TPM1-226ENST00000560959 LCE2DQ5TA82 110 aaPredicted RBP10.78□□□□□ -0.68
TPM1-226ENST00000560959 SMIM7Q9BQ49 75 aa10.78□□□□□ -0.68
TPM1-226ENST00000560959 NAT8BQ9UHF3 227 aa10.78□□□□□ -0.68
TPM1-226ENST00000560959 IFI27P40305 119 aaPredicted RBP10.77□□□□□ -0.69
TPM1-226ENST00000560959 CEBPGP53567 150 aa10.77□□□□□ -0.69
TPM1-226ENST00000560959 IGLV7-46A0A075B6I9 117 aa10.76□□□□□ -0.69
TPM1-226ENST00000560959 A0A1B0GW15 77 aa10.76□□□□□ -0.69
TPM1-226ENST00000560959 BLOC1S1P78537 153 aa10.76□□□□□ -0.69
TPM1-226ENST00000560959 MRPL55Q7Z7F7 128 aaKnown RBP10.76□□□□□ -0.69
TPM1-226ENST00000560959 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
TPM1-226ENST00000560959 FAM229BQ4G0N7 80 aa10.75□□□□□ -0.69
TPM1-226ENST00000560959 KRTAP13-2Q52LG2 175 aa10.75□□□□□ -0.69
TPM1-226ENST00000560959 LINC00304Q8N9R0 145 aa10.75□□□□□ -0.69
TPM1-226ENST00000560959 CKS1BP61024 79 aa10.74□□□□□ -0.69
TPM1-226ENST00000560959 LINC00173Q6ZV60 143 aa10.74□□□□□ -0.69
TPM1-226ENST00000560959 IGLV4-3A0A075B6K6 122 aa10.73□□□□□ -0.69
TPM1-226ENST00000560959 PRSS2P07478 247 aa10.73□□□□□ -0.69
TPM1-226ENST00000560959 FAM74A3Q4VXF1 159 aa10.73□□□□□ -0.69
TPM1-226ENST00000560959 C6orf226Q5I0X4 101 aa10.73□□□□□ -0.69
TPM1-226ENST00000560959 Q6ZN92 141 aa10.73□□□□□ -0.69
TPM1-226ENST00000560959 LINC00469Q8N7U9 141 aa10.73□□□□□ -0.69
TPM1-226ENST00000560959 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
TPM1-226ENST00000560959 XAGE1AQ9HD64 81 aa10.73□□□□□ -0.69
TPM1-226ENST00000560959 Q8IZM0 81 aa10.72□□□□□ -0.69
TPM1-226ENST00000560959 ANAPC11Q9NYG5 84 aa10.72□□□□□ -0.69
TPM1-226ENST00000560959 PPBPP02775 128 aa10.71□□□□□ -0.69
TPM1-226ENST00000560959 RAB5AP20339 215 aa10.71□□□□□ -0.69
TPM1-226ENST00000560959 TEX43Q6ZNM6 134 aa10.71□□□□□ -0.69
TPM1-226ENST00000560959 FSIP2Q5CZC0 6907 aa10.7□□□□□ -0.7
TPM1-226ENST00000560959 SMIM27A0A1W2PRY6 76 aa10.7□□□□□ -0.7
TPM1-226ENST00000560959 D6R8Y8 96 aa10.7□□□□□ -0.7
TPM1-226ENST00000560959 EIF5A2Q9GZV4 153 aaKnown RBP10.7□□□□□ -0.7
TPM1-226ENST00000560959 F8W036 122 aa10.69□□□□□ -0.7
TPM1-226ENST00000560959 NPYP01303 97 aa10.69□□□□□ -0.7
TPM1-226ENST00000560959 KRTAP13-1Q8IUC0 172 aa10.69□□□□□ -0.7
TPM1-226ENST00000560959 TCTE3Q8IZS6 198 aa10.69□□□□□ -0.7
TPM1-226ENST00000560959 LINC00167Q96N53 147 aa10.69□□□□□ -0.7
TPM1-226ENST00000560959 C2orf88Q9BSF0 95 aa10.69□□□□□ -0.7
TPM1-226ENST00000560959 CRCT1Q9UGL9 99 aa10.69□□□□□ -0.7
TPM1-226ENST00000560959 S100A8P05109 93 aa10.68□□□□□ -0.7
TPM1-226ENST00000560959 TOMM7Q9P0U1 55 aa10.68□□□□□ -0.7
TPM1-226ENST00000560959 FAM19A3Q7Z5A8 133 aa10.67□□□□□ -0.7
TPM1-226ENST00000560959 ALKBH7Q9BT30 221 aaPredicted RBP10.67□□□□□ -0.7
TPM1-226ENST00000560959 PPDPFQ9H3Y8 114 aa10.67□□□□□ -0.7
TPM1-226ENST00000560959 IGKV2D-26A0A0A0MRZ7 120 aa10.66□□□□□ -0.7
TPM1-226ENST00000560959 F8VRH5 84 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms