RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PCP2Q8IVA1 136 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 BOD1L2Q8IYS8 172 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 C14orf144Q96I85 54 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 TP73-AS1Q9UF72 201 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 VPS13DQ5THJ4 4388 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 TSTD3H0UI37 97 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 DLEU1O43261 78 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 IGHV3-30P01768 117 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 IGHV3-33P01772 117 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 IGHV3-30-3P0DP02 117 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 IGHV3-30-5P0DP03 117 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 TSPEAR-AS2P59090 65 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 C4orf48Q5BLP8 95 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 CLPSL2Q6UWE3 100 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 LINC00469Q8N7U9 141 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 MIEN1Q9BRT3 115 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 GEMIN7Q9H840 131 aaKnown RBP7.62□□□□□ -1.19
SNX1-212ENST00000560861 UQCR10Q9UDW1 63 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 KLK12Q9UKR0 248 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 KLK5Q9Y337 293 aaPredicted RBP7.62□□□□□ -1.19
SNX1-212ENST00000560861 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
SNX1-212ENST00000560861 IGKV3OR2-268A0A0C4DH90 116 aa7.61□□□□□ -1.19
SNX1-212ENST00000560861 SMIM1B2RUZ4 78 aa7.61□□□□□ -1.19
SNX1-212ENST00000560861 LEPROTO15243 131 aa7.61□□□□□ -1.19
SNX1-212ENST00000560861 HERVK_113P61574 105 aa7.61□□□□□ -1.19
SNX1-212ENST00000560861 KRTAP26-1Q6PEX3 210 aa7.61□□□□□ -1.19
SNX1-212ENST00000560861 TTTY13Q9BZ97 58 aa7.61□□□□□ -1.19
SNX1-212ENST00000560861 A0A087WZ39 114 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 TRAV8-3A0A0A6YYJ7 113 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 IGHV1-58A0A0C4DH39 117 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 SIVA1O15304 175 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 SPINK8P0C7L1 97 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 DDTP30046 118 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 NMUP48645 174 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 SS18Q15532 418 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 SLC25A34Q6PIV7 304 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 C2orf91Q6ZV80 131 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 MAPKAPK5-AS1Q8N8E1 139 aa7.6□□□□□ -1.19
SNX1-212ENST00000560861 DNAH1Q9P2D7 4330 aa7.59□□□□□ -1.19
SNX1-212ENST00000560861 H3BRM9 83 aa7.59□□□□□ -1.19
SNX1-212ENST00000560861 LINC01561Q8N1V8 128 aa7.59□□□□□ -1.19
SNX1-212ENST00000560861 CHCHD10Q8WYQ3 142 aaPredicted RBP7.59□□□□□ -1.19
SNX1-212ENST00000560861 PLEKHB2Q96CS7 222 aa7.59□□□□□ -1.19
SNX1-212ENST00000560861 WWC2-AS2Q96NR7 200 aa7.59□□□□□ -1.19
SNX1-212ENST00000560861 J3QQQ9 107 aa7.58□□□□□ -1.2
SNX1-212ENST00000560861 FOXI1Q12951 378 aa7.58□□□□□ -1.2
SNX1-212ENST00000560861 MIAQ16674 131 aa7.58□□□□□ -1.2
SNX1-212ENST00000560861 CD164L2Q6UWJ8 174 aa7.58□□□□□ -1.2
SNX1-212ENST00000560861 MUC7Q8TAX7 377 aa7.58□□□□□ -1.2
SNX1-212ENST00000560861 UBE2WQ96B02 151 aa7.58□□□□□ -1.2
SNX1-212ENST00000560861 RYR2Q92736 4967 aa7.57□□□□□ -1.2
SNX1-212ENST00000560861 TRAV8-4A0A0B4J246 113 aa7.57□□□□□ -1.2
SNX1-212ENST00000560861 PCP4L1A6NKN8 68 aa7.57□□□□□ -1.2
SNX1-212ENST00000560861 IBA57-AS1B1ANH7 110 aa7.57□□□□□ -1.2
SNX1-212ENST00000560861 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
SNX1-212ENST00000560861 XCL1P47992 114 aa7.57□□□□□ -1.2
SNX1-212ENST00000560861 ZFAND6Q6FIF0 208 aa7.57□□□□□ -1.2
SNX1-212ENST00000560861 LINC00528Q8N1L1 170 aa7.57□□□□□ -1.2
SNX1-212ENST00000560861 LYSTQ99698 3801 aa7.57□□□□□ -1.2
SNX1-212ENST00000560861 IGLV10-54A0A075B6I4 117 aa7.56□□□□□ -1.2
SNX1-212ENST00000560861 IGHV3-64A0A075B6Q5 118 aa7.56□□□□□ -1.2
SNX1-212ENST00000560861 MYMXA0A1B0GTQ4 84 aa7.56□□□□□ -1.2
SNX1-212ENST00000560861 LINC00587B1AMM8 73 aa7.56□□□□□ -1.2
SNX1-212ENST00000560861 C5orf38Q86SI9 138 aa7.56□□□□□ -1.2
SNX1-212ENST00000560861 Q9H8V8 135 aa7.56□□□□□ -1.2
SNX1-212ENST00000560861 GAGE12HA6NDE8 117 aa7.55□□□□□ -1.2
SNX1-212ENST00000560861 CRPP02741 224 aa7.55□□□□□ -1.2
SNX1-212ENST00000560861 KRTAP1-5Q9BYS1 174 aa7.55□□□□□ -1.2
SNX1-212ENST00000560861 HIGD1BQ9P298 99 aa7.55□□□□□ -1.2
SNX1-212ENST00000560861 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
SNX1-212ENST00000560861 K7EP13 123 aa7.54□□□□□ -1.2
SNX1-212ENST00000560861 COX7A2LO14548 114 aa7.54□□□□□ -1.2
SNX1-212ENST00000560861 LGALS3P17931 250 aaKnown RBP7.54□□□□□ -1.2
SNX1-212ENST00000560861 HNRNPA3P51991 378 aaKnown RBP7.54□□□□□ -1.2
SNX1-212ENST00000560861 C10orf126Q8N4M7 172 aa7.54□□□□□ -1.2
SNX1-212ENST00000560861 ALMS1Q8TCU4 4167 aa7.54□□□□□ -1.2
SNX1-212ENST00000560861 C3orf84H3BNL1 204 aa7.53□□□□□ -1.2
SNX1-212ENST00000560861 NDUFA1O15239 70 aa7.53□□□□□ -1.2
SNX1-212ENST00000560861 KIAA0087Q14695 138 aa7.53□□□□□ -1.2
SNX1-212ENST00000560861 UBE2DNLQ8IWF7 75 aa7.53□□□□□ -1.2
SNX1-212ENST00000560861 ZNF625Q96I27 306 aaPredicted RBP7.53□□□□□ -1.2
SNX1-212ENST00000560861 DNAH6Q9C0G6 4158 aa7.53□□□□□ -1.2
SNX1-212ENST00000560861 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
SNX1-212ENST00000560861 COX7B2Q8TF08 81 aa7.52□□□□□ -1.21
SNX1-212ENST00000560861 NDUFA12Q9UI09 145 aa7.52□□□□□ -1.21
SNX1-212ENST00000560861 CTAG1AP78358 180 aa7.51□□□□□ -1.21
SNX1-212ENST00000560861 Q8IZM0 81 aa7.51□□□□□ -1.21
SNX1-212ENST00000560861 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
SNX1-212ENST00000560861 LITAFQ99732 161 aa7.5□□□□□ -1.21
SNX1-212ENST00000560861 C1orf43Q9BWL3 253 aa7.5□□□□□ -1.21
SNX1-212ENST00000560861 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
SNX1-212ENST00000560861 NBDYA0A0U1RRE5 68 aa7.49□□□□□ -1.21
SNX1-212ENST00000560861 CASC10Q5T4H9 136 aa7.49□□□□□ -1.21
SNX1-212ENST00000560861 C15orf56Q8N910 161 aa7.49□□□□□ -1.21
SNX1-212ENST00000560861 ORAOV1Q8WV07 137 aa7.49□□□□□ -1.21
SNX1-212ENST00000560861 Q9HAA7 133 aa7.49□□□□□ -1.21
SNX1-212ENST00000560861 SPANXB1Q9NS25 103 aaPredicted RBP7.49□□□□□ -1.21
SNX1-212ENST00000560861 IGKV2D-24A0A075B6R9 120 aa7.48□□□□□ -1.21
SNX1-212ENST00000560861 TIMM17BO60830 172 aa7.48□□□□□ -1.21
SNX1-212ENST00000560861 HSD52Q0P140 79 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms