RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 IFITM10A6NMD0 228 aa9.77□□□□□ -0.85
SNRPA1-213ENST00000560856 CIRBPQ14011 172 aaKnown RBP9.77□□□□□ -0.85
SNRPA1-213ENST00000560856 ZC2HC1BQ5TFG8 222 aa9.77□□□□□ -0.85
SNRPA1-213ENST00000560856 TMEM141Q96I45 108 aa9.77□□□□□ -0.85
SNRPA1-213ENST00000560856 AMELXQ99217 191 aa9.77□□□□□ -0.85
SNRPA1-213ENST00000560856 IGHV3-64A0A075B6Q5 118 aa9.76□□□□□ -0.85
SNRPA1-213ENST00000560856 NPSP0C0P6 89 aa9.76□□□□□ -0.85
SNRPA1-213ENST00000560856 PRSS3P2Q8NHM4 247 aa9.76□□□□□ -0.85
SNRPA1-213ENST00000560856 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
SNRPA1-213ENST00000560856 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
SNRPA1-213ENST00000560856 UBE2D1P51668 147 aa9.75□□□□□ -0.85
SNRPA1-213ENST00000560856 LINC00242Q5T6M2 205 aa9.75□□□□□ -0.85
SNRPA1-213ENST00000560856 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
SNRPA1-213ENST00000560856 COX6A2Q02221 97 aa9.74□□□□□ -0.85
SNRPA1-213ENST00000560856 URB1-AS1Q96HZ7 61 aa9.74□□□□□ -0.85
SNRPA1-213ENST00000560856 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
SNRPA1-213ENST00000560856 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
SNRPA1-213ENST00000560856 MALP21145 153 aa9.73□□□□□ -0.85
SNRPA1-213ENST00000560856 G0S2P27469 103 aa9.73□□□□□ -0.85
SNRPA1-213ENST00000560856 TEX43Q6ZNM6 134 aa9.73□□□□□ -0.85
SNRPA1-213ENST00000560856 LINC00528Q8N1L1 170 aa9.73□□□□□ -0.85
SNRPA1-213ENST00000560856 C18orf32Q8TCD1 76 aa9.73□□□□□ -0.85
SNRPA1-213ENST00000560856 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
SNRPA1-213ENST00000560856 ZNF561-AS1K7EIQ3 104 aa9.72□□□□□ -0.85
SNRPA1-213ENST00000560856 CHTF8P0CG12 524 aa9.72□□□□□ -0.85
SNRPA1-213ENST00000560856 SYCNQ0VAF6 134 aa9.72□□□□□ -0.85
SNRPA1-213ENST00000560856 VCX2Q9H322 139 aa9.72□□□□□ -0.85
SNRPA1-213ENST00000560856 A0A087WZ39 114 aa9.71□□□□□ -0.86
SNRPA1-213ENST00000560856 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
SNRPA1-213ENST00000560856 ERASQ7Z444 233 aa9.71□□□□□ -0.86
SNRPA1-213ENST00000560856 FAM19A3Q7Z5A8 133 aa9.71□□□□□ -0.86
SNRPA1-213ENST00000560856 CBLN2Q8IUK8 224 aa9.71□□□□□ -0.86
SNRPA1-213ENST00000560856 SPACA4Q8TDM5 124 aa9.71□□□□□ -0.86
SNRPA1-213ENST00000560856 C2orf48Q96LS8 159 aa9.71□□□□□ -0.86
SNRPA1-213ENST00000560856 CARD19Q96LW7 228 aa9.71□□□□□ -0.86
SNRPA1-213ENST00000560856 FLG2Q5D862 2391 aaPredicted RBP9.7□□□□□ -0.86
SNRPA1-213ENST00000560856 A0A096LNJ9 63 aa9.7□□□□□ -0.86
SNRPA1-213ENST00000560856 APOMO95445 188 aa9.7□□□□□ -0.86
SNRPA1-213ENST00000560856 Q6ZN92 141 aa9.7□□□□□ -0.86
SNRPA1-213ENST00000560856 Q6ZRU5 148 aa9.7□□□□□ -0.86
SNRPA1-213ENST00000560856 FA2HQ7L5A8 372 aa9.7□□□□□ -0.86
SNRPA1-213ENST00000560856 OR10D4PQ8NGN7 298 aa9.7□□□□□ -0.86
SNRPA1-213ENST00000560856 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
SNRPA1-213ENST00000560856 ORAOV1Q8WV07 137 aa9.69□□□□□ -0.86
SNRPA1-213ENST00000560856 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
SNRPA1-213ENST00000560856 C2orf88Q9BSF0 95 aa9.69□□□□□ -0.86
SNRPA1-213ENST00000560856 SMCO4Q9NRQ5 59 aa9.69□□□□□ -0.86
SNRPA1-213ENST00000560856 A0A087WYN8 130 aa9.68□□□□□ -0.86
SNRPA1-213ENST00000560856 A0A096LNI7 61 aa9.68□□□□□ -0.86
SNRPA1-213ENST00000560856 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
SNRPA1-213ENST00000560856 KIAA0087Q14695 138 aa9.68□□□□□ -0.86
SNRPA1-213ENST00000560856 PAPPA-AS1Q5QFB9 102 aa9.68□□□□□ -0.86
SNRPA1-213ENST00000560856 LINC01561Q8N1V8 128 aa9.68□□□□□ -0.86
SNRPA1-213ENST00000560856 LINC00614P0C842 121 aa9.67□□□□□ -0.86
SNRPA1-213ENST00000560856 INAFM2P0DMQ5 153 aa9.67□□□□□ -0.86
SNRPA1-213ENST00000560856 CAMK2N2Q96S95 79 aa9.67□□□□□ -0.86
SNRPA1-213ENST00000560856 PLAC8Q9NZF1 115 aa9.67□□□□□ -0.86
SNRPA1-213ENST00000560856 IGKV2-24A0A0C4DH68 120 aa9.65□□□□□ -0.86
SNRPA1-213ENST00000560856 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
SNRPA1-213ENST00000560856 F8WDY8 70 aa9.65□□□□□ -0.86
SNRPA1-213ENST00000560856 PLA2G1BP04054 148 aaKnown RBP9.65□□□□□ -0.86
SNRPA1-213ENST00000560856 RNF151Q2KHN1 245 aa9.65□□□□□ -0.86
SNRPA1-213ENST00000560856 C10orf25Q5T742 122 aa9.65□□□□□ -0.86
SNRPA1-213ENST00000560856 MYCBP2O75592 4640 aa9.65□□□□□ -0.87
SNRPA1-213ENST00000560856 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
SNRPA1-213ENST00000560856 MAJINQ3KP22 176 aa9.64□□□□□ -0.87
SNRPA1-213ENST00000560856 CST9LQ9H4G1 147 aa9.64□□□□□ -0.87
SNRPA1-213ENST00000560856 MRPL35Q9NZE8 188 aaKnown RBP9.64□□□□□ -0.87
SNRPA1-213ENST00000560856 CDKN2A-AS1Q9UH64 79 aa9.64□□□□□ -0.87
SNRPA1-213ENST00000560856 HERVK_113P63121 156 aa9.63□□□□□ -0.87
SNRPA1-213ENST00000560856 PDZD11Q5EBL8 140 aa9.63□□□□□ -0.87
SNRPA1-213ENST00000560856 UNQ6190/PRO20217Q6UXQ8 127 aa9.63□□□□□ -0.87
SNRPA1-213ENST00000560856 DPH3Q96FX2 82 aa9.63□□□□□ -0.87
SNRPA1-213ENST00000560856 PKHD1L1Q86WI1 4243 aa9.62□□□□□ -0.87
SNRPA1-213ENST00000560856 LOC107984640A0A0U1RRK4 108 aa9.62□□□□□ -0.87
SNRPA1-213ENST00000560856 PTTG1IPP53801 180 aa9.62□□□□□ -0.87
SNRPA1-213ENST00000560856 SEC11AP67812 179 aa9.62□□□□□ -0.87
SNRPA1-213ENST00000560856 PMVKQ15126 192 aa9.62□□□□□ -0.87
SNRPA1-213ENST00000560856 PMCHL1Q16048 86 aa9.62□□□□□ -0.87
SNRPA1-213ENST00000560856 PKIGQ9Y2B9 76 aa9.62□□□□□ -0.87
SNRPA1-213ENST00000560856 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
SNRPA1-213ENST00000560856 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
SNRPA1-213ENST00000560856 COLCA2A8K830 154 aa9.61□□□□□ -0.87
SNRPA1-213ENST00000560856 NDUFA1O15239 70 aa9.61□□□□□ -0.87
SNRPA1-213ENST00000560856 HBDP02042 147 aa9.61□□□□□ -0.87
SNRPA1-213ENST00000560856 RAB5BP61020 215 aa9.61□□□□□ -0.87
SNRPA1-213ENST00000560856 STPG4Q8N801 248 aa9.61□□□□□ -0.87
SNRPA1-213ENST00000560856 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
SNRPA1-213ENST00000560856 C6orf48Q9UBA6 75 aa9.61□□□□□ -0.87
SNRPA1-213ENST00000560856 TRGC2P03986 189 aa9.6□□□□□ -0.87
SNRPA1-213ENST00000560856 GAGE2BQ13066 116 aa9.6□□□□□ -0.87
SNRPA1-213ENST00000560856 C2orf82Q6UX34 121 aa9.6□□□□□ -0.87
SNRPA1-213ENST00000560856 GEMIN7Q9H840 131 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-213ENST00000560856 TLX1NBP0CAT3 122 aa9.59□□□□□ -0.87
SNRPA1-213ENST00000560856 RPL37AP61513 92 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-213ENST00000560856 Q8IZM0 81 aa9.58□□□□□ -0.88
SNRPA1-213ENST00000560856 CHCHD1Q96BP2 118 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-213ENST00000560856 A0A1W2PNN7 141 aa9.57□□□□□ -0.88
SNRPA1-213ENST00000560856 SMIM1B2RUZ4 78 aa9.57□□□□□ -0.88
SNRPA1-213ENST00000560856 LINC00469Q8N7U9 141 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms