RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 MT1AP04731 61 aa-1.41□□□□□ -2.64
PSMA4-221ENST00000560842 TTC9CQ8N5M4 171 aa-1.41□□□□□ -2.64
PSMA4-221ENST00000560842 LAMA3Q16787 3333 aa-1.41□□□□□ -2.64
PSMA4-221ENST00000560842 DNAH11Q96DT5 4516 aa-1.41□□□□□ -2.64
PSMA4-221ENST00000560842 DNAH1Q9P2D7 4330 aa-1.41□□□□□ -2.64
PSMA4-221ENST00000560842 NSD3Q9BZ95 1437 aa-1.41□□□□□ -2.64
PSMA4-221ENST00000560842 SHANK2Q9UPX8 1470 aa-1.42□□□□□ -2.64
PSMA4-221ENST00000560842 SBF2Q86WG5 1849 aa-1.42□□□□□ -2.64
PSMA4-221ENST00000560842 CEP152O94986 1710 aa-1.42□□□□□ -2.64
PSMA4-221ENST00000560842 DEFB135Q30KP9 77 aa-1.42□□□□□ -2.64
PSMA4-221ENST00000560842 USP9XQ93008 2570 aaPredicted RBP-1.43□□□□□ -2.64
PSMA4-221ENST00000560842 APOBP04114 4563 aaKnown RBP-1.43□□□□□ -2.64
PSMA4-221ENST00000560842 WDR87Q6ZQQ6 2873 aa-1.43□□□□□ -2.64
PSMA4-221ENST00000560842 K7ERU9 68 aa-1.43□□□□□ -2.64
PSMA4-221ENST00000560842 ARPC5O15511 151 aa-1.43□□□□□ -2.64
PSMA4-221ENST00000560842 DEFB112Q30KQ8 113 aa-1.43□□□□□ -2.64
PSMA4-221ENST00000560842 LINC01558Q9Y6Z2 57 aa-1.43□□□□□ -2.64
PSMA4-221ENST00000560842 DNHD1Q96M86 4753 aa-1.43□□□□□ -2.64
PSMA4-221ENST00000560842 SPEF2Q9C093 1822 aa-1.44□□□□□ -2.64
PSMA4-221ENST00000560842 DSPP15924 2871 aaKnown RBP-1.44□□□□□ -2.64
PSMA4-221ENST00000560842 MYOM3Q5VTT5 1437 aa-1.45□□□□□ -2.64
PSMA4-221ENST00000560842 PPIP5K1Q6PFW1 1433 aa-1.45□□□□□ -2.64
PSMA4-221ENST00000560842 TRBV7-4A0A0J9YYF1 115 aa-1.45□□□□□ -2.64
PSMA4-221ENST00000560842 IGLC7A0M8Q6 106 aa-1.45□□□□□ -2.64
PSMA4-221ENST00000560842 COX8AP10176 69 aa-1.45□□□□□ -2.64
PSMA4-221ENST00000560842 PATJQ8NI35 1801 aa-1.45□□□□□ -2.64
PSMA4-221ENST00000560842 SACSQ9NZJ4 4579 aa-1.46□□□□□ -2.64
PSMA4-221ENST00000560842 RIF1Q5UIP0 2472 aaKnown RBP-1.46□□□□□ -2.64
PSMA4-221ENST00000560842 ZFHX3Q15911 3703 aa-1.46□□□□□ -2.64
PSMA4-221ENST00000560842 SYS1-DBNDD2H3BUS1 97 aa-1.46□□□□□ -2.64
PSMA4-221ENST00000560842 NDUFA4L2Q9NRX3 87 aa-1.46□□□□□ -2.64
PSMA4-221ENST00000560842 CMYA5Q8N3K9 4069 aa-1.47□□□□□ -2.64
PSMA4-221ENST00000560842 NBEAQ8NFP9 2946 aa-1.47□□□□□ -2.64
PSMA4-221ENST00000560842 KIF21AQ7Z4S6 1674 aa-1.47□□□□□ -2.64
PSMA4-221ENST00000560842 IFNGP01579 166 aa-1.47□□□□□ -2.64
PSMA4-221ENST00000560842 AKAP14Q86UN6 197 aa-1.47□□□□□ -2.64
PSMA4-221ENST00000560842 TMEM263Q8WUH6 116 aaKnown RBP-1.47□□□□□ -2.64
PSMA4-221ENST00000560842 TCEAL4Q96EI5 215 aa-1.47□□□□□ -2.64
PSMA4-221ENST00000560842 MGST2Q99735 147 aa-1.47□□□□□ -2.64
PSMA4-221ENST00000560842 DYNLRB1Q9NP97 96 aa-1.47□□□□□ -2.64
PSMA4-221ENST00000560842 KDM5AP29375 1690 aaKnown RBP-1.48□□□□□ -2.65
PSMA4-221ENST00000560842 C12orf73Q69YU5 71 aa-1.48□□□□□ -2.65
PSMA4-221ENST00000560842 USMG5Q96IX5 58 aa-1.48□□□□□ -2.65
PSMA4-221ENST00000560842 TMEM191AQ9H0A3 160 aa-1.48□□□□□ -2.65
PSMA4-221ENST00000560842 MGAM2Q2M2H8 2515 aa-1.48□□□□□ -2.65
PSMA4-221ENST00000560842 TULP4Q9NRJ4 1543 aa-1.49□□□□□ -2.65
PSMA4-221ENST00000560842 PKD1L2Q7Z442 2459 aa-1.49□□□□□ -2.65
PSMA4-221ENST00000560842 LOC285095A0A1B0GVY8 99 aa-1.49□□□□□ -2.65
PSMA4-221ENST00000560842 COPZ1P61923 177 aa-1.49□□□□□ -2.65
PSMA4-221ENST00000560842 RPS25P62851 125 aaKnown RBP-1.49□□□□□ -2.65
PSMA4-221ENST00000560842 SMCO1Q147U7 214 aa-1.49□□□□□ -2.65
PSMA4-221ENST00000560842 DPH3Q96FX2 82 aa-1.49□□□□□ -2.65
PSMA4-221ENST00000560842 APLNQ9ULZ1 77 aa-1.49□□□□□ -2.65
PSMA4-221ENST00000560842 ARAP2Q8WZ64 1704 aa-1.49□□□□□ -2.65
PSMA4-221ENST00000560842 CCDC168Q8NDH2 2452 aa-1.5□□□□□ -2.65
PSMA4-221ENST00000560842 TRBV7-3A0A075B6L6 115 aa-1.5□□□□□ -2.65
PSMA4-221ENST00000560842 SFT2D2O95562 160 aa-1.5□□□□□ -2.65
PSMA4-221ENST00000560842 MGPP08493 103 aa-1.5□□□□□ -2.65
PSMA4-221ENST00000560842 CCDC167Q9P0B6 97 aa-1.5□□□□□ -2.65
PSMA4-221ENST00000560842 DOCK2Q92608 1830 aa-1.5□□□□□ -2.65
PSMA4-221ENST00000560842 RELNP78509 3460 aa-1.5□□□□□ -2.65
PSMA4-221ENST00000560842 ARHGEF12Q9NZN5 1544 aa-1.5□□□□□ -2.65
PSMA4-221ENST00000560842 REV3LO60673 3130 aa-1.51□□□□□ -2.65
PSMA4-221ENST00000560842 RAPGEF6Q8TEU7 1601 aa-1.51□□□□□ -2.65
PSMA4-221ENST00000560842 LINC00959A0A1B0GUT2 108 aa-1.51□□□□□ -2.65
PSMA4-221ENST00000560842 DR1Q01658 176 aa-1.51□□□□□ -2.65
PSMA4-221ENST00000560842 Q8N8P6 123 aa-1.51□□□□□ -2.65
PSMA4-221ENST00000560842 TSTD1Q8NFU3 115 aa-1.51□□□□□ -2.65
PSMA4-221ENST00000560842 COPS9Q8WXC6 57 aa-1.51□□□□□ -2.65
PSMA4-221ENST00000560842 TPT1P8Q9HAU6 139 aa-1.51□□□□□ -2.65
PSMA4-221ENST00000560842 SETBP1Q9Y6X0 1596 aa-1.51□□□□□ -2.65
PSMA4-221ENST00000560842 CPSF4LA6NMK7 179 aaKnown RBP-1.52□□□□□ -2.65
PSMA4-221ENST00000560842 HMGN4O00479 90 aa-1.52□□□□□ -2.65
PSMA4-221ENST00000560842 HIST1H1DP16402 221 aaKnown RBP-1.52□□□□□ -2.65
PSMA4-221ENST00000560842 C10orf113Q5VZT2 155 aa-1.52□□□□□ -2.65
PSMA4-221ENST00000560842 COPZ2Q9P299 210 aa-1.52□□□□□ -2.65
PSMA4-221ENST00000560842 RIMS1Q86UR5 1692 aaKnown RBP-1.52□□□□□ -2.65
PSMA4-221ENST00000560842 DYNC1H1Q14204 4646 aaKnown RBP-1.52□□□□□ -2.65
PSMA4-221ENST00000560842 TRANK1O15050 2925 aa-1.53□□□□□ -2.65
PSMA4-221ENST00000560842 GRIN2AQ12879 1464 aa-1.53□□□□□ -2.65
PSMA4-221ENST00000560842 MRPL54Q6P161 138 aaKnown RBP-1.53□□□□□ -2.65
PSMA4-221ENST00000560842 LZICQ8WZA0 190 aa-1.53□□□□□ -2.65
PSMA4-221ENST00000560842 SPRR4Q96PI1 79 aa-1.53□□□□□ -2.65
PSMA4-221ENST00000560842 UTP20O75691 2785 aaKnown RBP-1.54□□□□□ -2.66
PSMA4-221ENST00000560842 DNAH7Q8WXX0 4024 aa-1.54□□□□□ -2.66
PSMA4-221ENST00000560842 ANP32BQ92688 251 aaKnown RBP-1.54□□□□□ -2.66
PSMA4-221ENST00000560842 FAIMQ9NVQ4 179 aa-1.54□□□□□ -2.66
PSMA4-221ENST00000560842 COL12A1Q99715 3063 aa-1.54□□□□□ -2.66
PSMA4-221ENST00000560842 UBA52P62987 128 aaKnown RBP-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 DEFA5Q01523 94 aa-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 WHAMMP3Q1A5X7 153 aa-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 SMIM21Q3B7S5 101 aa-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 C9orf62Q8N4C0 152 aa-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 PDCD10Q9BUL8 212 aa-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 LRRK2Q5S007 2527 aa-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 CELSR3Q9NYQ7 3312 aa-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 KIAA0556O60303 1618 aa-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 GCN1Q92616 2671 aaKnown RBP-1.55□□□□□ -2.66
PSMA4-221ENST00000560842 TSLPQ969D9 159 aa-1.56□□□□□ -2.66
PSMA4-221ENST00000560842 NAA60Q9H7X0 242 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms