RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 C2orf88Q9BSF0 95 aa10.09□□□□□ -0.79
LYSMD2-204ENST00000560491 LINC00242Q5T6M2 205 aa10.08□□□□□ -0.8
LYSMD2-204ENST00000560491 HSPG2P98160 4391 aa10.07□□□□□ -0.8
LYSMD2-204ENST00000560491 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
LYSMD2-204ENST00000560491 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
LYSMD2-204ENST00000560491 HBDP02042 147 aa10.07□□□□□ -0.8
LYSMD2-204ENST00000560491 SLPIP03973 132 aa10.07□□□□□ -0.8
LYSMD2-204ENST00000560491 MALP21145 153 aa10.07□□□□□ -0.8
LYSMD2-204ENST00000560491 COX6A2Q02221 97 aa10.07□□□□□ -0.8
LYSMD2-204ENST00000560491 RYR1P21817 5038 aa10.07□□□□□ -0.8
LYSMD2-204ENST00000560491 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
LYSMD2-204ENST00000560491 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
LYSMD2-204ENST00000560491 PAPPA-AS1Q5QFB9 102 aa10.06□□□□□ -0.8
LYSMD2-204ENST00000560491 BAGE3Q86Y29 109 aa10.06□□□□□ -0.8
LYSMD2-204ENST00000560491 CHCHD1Q96BP2 118 aaKnown RBP10.06□□□□□ -0.8
LYSMD2-204ENST00000560491 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
LYSMD2-204ENST00000560491 S100A1P23297 94 aa10.05□□□□□ -0.8
LYSMD2-204ENST00000560491 CNBPP62633 177 aaKnown RBP10.05□□□□□ -0.8
LYSMD2-204ENST00000560491 PDZD11Q5EBL8 140 aa10.04□□□□□ -0.8
LYSMD2-204ENST00000560491 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.03□□□□□ -0.8
LYSMD2-204ENST00000560491 CDK2AP2O75956 126 aa10.03□□□□□ -0.8
LYSMD2-204ENST00000560491 LINC00310P59036 64 aa10.03□□□□□ -0.8
LYSMD2-204ENST00000560491 HAMPP81172 84 aa10.03□□□□□ -0.8
LYSMD2-204ENST00000560491 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
LYSMD2-204ENST00000560491 HERC2O95714 4834 aa10.03□□□□□ -0.8
LYSMD2-204ENST00000560491 A0A0J9YXV3 536 aa10.02□□□□□ -0.81
LYSMD2-204ENST00000560491 HSBP1O75506 76 aa10.02□□□□□ -0.81
LYSMD2-204ENST00000560491 SERF1AO75920 110 aa10.02□□□□□ -0.81
LYSMD2-204ENST00000560491 PMVKQ15126 192 aa10.02□□□□□ -0.81
LYSMD2-204ENST00000560491 FAM19A3Q7Z5A8 133 aa10.02□□□□□ -0.81
LYSMD2-204ENST00000560491 FAM19A2Q8N3H0 131 aa10.02□□□□□ -0.81
LYSMD2-204ENST00000560491 C9orf163Q8N9P6 203 aa10.02□□□□□ -0.81
LYSMD2-204ENST00000560491 CST9LQ9H4G1 147 aa10.02□□□□□ -0.81
LYSMD2-204ENST00000560491 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
LYSMD2-204ENST00000560491 A0A087WZ39 114 aa10.01□□□□□ -0.81
LYSMD2-204ENST00000560491 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.01□□□□□ -0.81
LYSMD2-204ENST00000560491 ZNF561-AS1K7EIQ3 104 aa10.01□□□□□ -0.81
LYSMD2-204ENST00000560491 APOMO95445 188 aa10.01□□□□□ -0.81
LYSMD2-204ENST00000560491 ORAOV1Q8WV07 137 aa10.01□□□□□ -0.81
LYSMD2-204ENST00000560491 IGHV3-64A0A075B6Q5 118 aa10□□□□□ -0.81
LYSMD2-204ENST00000560491 NUPR1O60356 82 aa10□□□□□ -0.81
LYSMD2-204ENST00000560491 ATP5LO75964 103 aa10□□□□□ -0.81
LYSMD2-204ENST00000560491 XGP55808 180 aa10□□□□□ -0.81
LYSMD2-204ENST00000560491 NDUFA6P56556 154 aa10□□□□□ -0.81
LYSMD2-204ENST00000560491 SPAG11BQ08648 103 aa10□□□□□ -0.81
LYSMD2-204ENST00000560491 LCE2AQ5TA79 106 aaPredicted RBP10□□□□□ -0.81
LYSMD2-204ENST00000560491 GEMIN7Q9H840 131 aaKnown RBP10□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST1H2BKO60814 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST1H2BJP06899 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST1H2BOP23527 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST1H2BBP33778 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST1H2BDP58876 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST1H2BCP62807 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HERVK_113P63121 156 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST2H2BEQ16778 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST1H2BHQ93079 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST1H2BNQ99877 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 HIST1H2BMQ99879 126 aa9.99□□□□□ -0.81
LYSMD2-204ENST00000560491 SEC11AP67812 179 aa9.98□□□□□ -0.81
LYSMD2-204ENST00000560491 Q6ZSA8 131 aa9.98□□□□□ -0.81
LYSMD2-204ENST00000560491 OR10D4PQ8NGN7 298 aa9.98□□□□□ -0.81
LYSMD2-204ENST00000560491 CARD19Q96LW7 228 aa9.98□□□□□ -0.81
LYSMD2-204ENST00000560491 CDKN2A-AS1Q9UH64 79 aa9.98□□□□□ -0.81
LYSMD2-204ENST00000560491 TINCRA0A1B0GVN0 87 aa9.97□□□□□ -0.81
LYSMD2-204ENST00000560491 SYCNQ0VAF6 134 aa9.97□□□□□ -0.81
LYSMD2-204ENST00000560491 SDIM1Q6ZPB5 146 aa9.97□□□□□ -0.81
LYSMD2-204ENST00000560491 LINC00469Q8N7U9 141 aa9.97□□□□□ -0.81
LYSMD2-204ENST00000560491 Q6ZRU5 148 aa9.96□□□□□ -0.82
LYSMD2-204ENST00000560491 CAMK2N2Q96S95 79 aa9.96□□□□□ -0.82
LYSMD2-204ENST00000560491 PANO1I0J062 215 aa9.95□□□□□ -0.82
LYSMD2-204ENST00000560491 LINC01561Q8N1V8 128 aa9.95□□□□□ -0.82
LYSMD2-204ENST00000560491 IFI27L1Q96BM0 104 aa9.95□□□□□ -0.82
LYSMD2-204ENST00000560491 C2orf48Q96LS8 159 aa9.95□□□□□ -0.82
LYSMD2-204ENST00000560491 CHAC1Q9BUX1 264 aa9.95□□□□□ -0.82
LYSMD2-204ENST00000560491 KRTAP17-1Q9BYP8 105 aa9.95□□□□□ -0.82
LYSMD2-204ENST00000560491 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.95□□□□□ -0.82
LYSMD2-204ENST00000560491 IGLV5-45A0A087WSX0 123 aa9.94□□□□□ -0.82
LYSMD2-204ENST00000560491 CHTF8P0CG12 524 aa9.94□□□□□ -0.82
LYSMD2-204ENST00000560491 IGLC3P0DOY3 106 aa9.94□□□□□ -0.82
LYSMD2-204ENST00000560491 KIAA0087Q14695 138 aa9.94□□□□□ -0.82
LYSMD2-204ENST00000560491 SCXQ7RTU7 201 aa9.94□□□□□ -0.82
LYSMD2-204ENST00000560491 PACRGQ96M98 296 aaPredicted RBP9.94□□□□□ -0.82
LYSMD2-204ENST00000560491 LEPROTL1O95214 131 aa9.93□□□□□ -0.82
LYSMD2-204ENST00000560491 TOMM7Q9P0U1 55 aa9.93□□□□□ -0.82
LYSMD2-204ENST00000560491 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
LYSMD2-204ENST00000560491 SPINK8P0C7L1 97 aa9.92□□□□□ -0.82
LYSMD2-204ENST00000560491 C10orf25Q5T742 122 aa9.92□□□□□ -0.82
LYSMD2-204ENST00000560491 CHTOPQ9Y3Y2 248 aaKnown RBP9.92□□□□□ -0.82
LYSMD2-204ENST00000560491 FAT1Q14517 4588 aa9.92□□□□□ -0.82
LYSMD2-204ENST00000560491 C11orf86A6NJI1 115 aa9.91□□□□□ -0.82
LYSMD2-204ENST00000560491 H0Y8G0 127 aa9.91□□□□□ -0.82
LYSMD2-204ENST00000560491 NDUFA1O15239 70 aa9.91□□□□□ -0.82
LYSMD2-204ENST00000560491 SMR3BP02814 79 aaPredicted RBP9.91□□□□□ -0.82
LYSMD2-204ENST00000560491 FABP4P15090 132 aa9.91□□□□□ -0.82
LYSMD2-204ENST00000560491 ZNF22P17026 224 aaPredicted RBP9.91□□□□□ -0.82
LYSMD2-204ENST00000560491 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
LYSMD2-204ENST00000560491 UNQ6190/PRO20217Q6UXQ8 127 aa9.91□□□□□ -0.82
LYSMD2-204ENST00000560491 A0A096LNI7 61 aa9.9□□□□□ -0.82
LYSMD2-204ENST00000560491 TRAV12-1A0A0B4J245 112 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms