RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 VPS13DQ5THJ4 4388 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 IGHV3OR16-9A0A0B4J2B5 98 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 DLEU1O43261 78 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 IGHV3-30P01768 117 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 IGHV3-33P01772 117 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 IGHV3-30-3P0DP02 117 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 IGHV3-30-5P0DP03 117 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 COX8AP10176 69 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 COX6A2Q02221 97 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 UBE2DNLQ8IWF7 75 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 LINC01561Q8N1V8 128 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 Q8N3U1 123 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 C10orf126Q8N4M7 172 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 MUC7Q8TAX7 377 aa5.84□□□□□ -1.47
TRAF3-209ENST00000560463 DNAH1Q9P2D7 4330 aa5.84□□□□□ -1.48
TRAF3-209ENST00000560463 STARD9Q9P2P6 4700 aa5.84□□□□□ -1.48
TRAF3-209ENST00000560463 A0A087WZ39 114 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 LEPROTO15243 131 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 NMUP48645 174 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 SLC25A34Q6PIV7 304 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 CD164L2Q6UWJ8 174 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 ENHOQ6UWT2 76 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 BOD1L2Q8IYS8 172 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 PLEKHB2Q96CS7 222 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 PRO1933Q9H354 126 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 Q9H8V8 135 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 UQCR10Q9UDW1 63 aa5.83□□□□□ -1.48
TRAF3-209ENST00000560463 IGKV2D-26A0A0A0MRZ7 120 aa5.82□□□□□ -1.48
TRAF3-209ENST00000560463 IGLV5-39A0A0G2JS06 123 aa5.82□□□□□ -1.48
TRAF3-209ENST00000560463 CLPSL2Q6UWE3 100 aa5.82□□□□□ -1.48
TRAF3-209ENST00000560463 CHCHD10Q8WYQ3 142 aaPredicted RBP5.82□□□□□ -1.48
TRAF3-209ENST00000560463 UBE2WQ96B02 151 aa5.82□□□□□ -1.48
TRAF3-209ENST00000560463 C14orf144Q96I85 54 aa5.82□□□□□ -1.48
TRAF3-209ENST00000560463 MIEN1Q9BRT3 115 aa5.82□□□□□ -1.48
TRAF3-209ENST00000560463 TRAV8-3A0A0A6YYJ7 113 aa5.81□□□□□ -1.48
TRAF3-209ENST00000560463 IBA57-AS1B1ANH7 110 aa5.81□□□□□ -1.48
TRAF3-209ENST00000560463 SMIM1B2RUZ4 78 aa5.81□□□□□ -1.48
TRAF3-209ENST00000560463 J3QQQ9 107 aa5.81□□□□□ -1.48
TRAF3-209ENST00000560463 XCL1P47992 114 aa5.81□□□□□ -1.48
TRAF3-209ENST00000560463 DNAH6Q9C0G6 4158 aa5.8□□□□□ -1.48
TRAF3-209ENST00000560463 IGLV10-54A0A075B6I4 117 aa5.8□□□□□ -1.48
TRAF3-209ENST00000560463 COX7A2LO14548 114 aa5.8□□□□□ -1.48
TRAF3-209ENST00000560463 SPINK8P0C7L1 97 aa5.8□□□□□ -1.48
TRAF3-209ENST00000560463 LGALS3P17931 250 aaKnown RBP5.8□□□□□ -1.48
TRAF3-209ENST00000560463 DDTP30046 118 aa5.8□□□□□ -1.48
TRAF3-209ENST00000560463 ZFAND6Q6FIF0 208 aa5.8□□□□□ -1.48
TRAF3-209ENST00000560463 PCP2Q8IVA1 136 aa5.8□□□□□ -1.48
TRAF3-209ENST00000560463 RMI2Q96E14 147 aa5.8□□□□□ -1.48
TRAF3-209ENST00000560463 C1orf43Q9BWL3 253 aa5.8□□□□□ -1.48
TRAF3-209ENST00000560463 MYMXA0A1B0GTQ4 84 aa5.79□□□□□ -1.48
TRAF3-209ENST00000560463 C3orf84H3BNL1 204 aa5.79□□□□□ -1.48
TRAF3-209ENST00000560463 APOMO95445 188 aa5.79□□□□□ -1.48
TRAF3-209ENST00000560463 FOXI1Q12951 378 aa5.79□□□□□ -1.48
TRAF3-209ENST00000560463 SFTA2Q6UW10 78 aa5.79□□□□□ -1.48
TRAF3-209ENST00000560463 C5orf38Q86SI9 138 aa5.79□□□□□ -1.48
TRAF3-209ENST00000560463 HIGD1BQ9P298 99 aa5.79□□□□□ -1.48
TRAF3-209ENST00000560463 COX11Q9Y6N1 276 aa5.79□□□□□ -1.48
TRAF3-209ENST00000560463 IGHV3-64A0A075B6Q5 118 aa5.78□□□□□ -1.48
TRAF3-209ENST00000560463 GAGE12HA6NDE8 117 aa5.78□□□□□ -1.48
TRAF3-209ENST00000560463 PCP4L1A6NKN8 68 aa5.78□□□□□ -1.48
TRAF3-209ENST00000560463 ZNF815PA8K554 130 aa5.78□□□□□ -1.48
TRAF3-209ENST00000560463 MALP21145 153 aa5.78□□□□□ -1.48
TRAF3-209ENST00000560463 TTC32Q5I0X7 151 aa5.78□□□□□ -1.48
TRAF3-209ENST00000560463 Q8IZM0 81 aa5.78□□□□□ -1.48
TRAF3-209ENST00000560463 COX7B2Q8TF08 81 aa5.78□□□□□ -1.48
TRAF3-209ENST00000560463 NDUFA1O15239 70 aa5.77□□□□□ -1.49
TRAF3-209ENST00000560463 HNRNPA3P51991 378 aaKnown RBP5.77□□□□□ -1.49
TRAF3-209ENST00000560463 TSPEAR-AS2P59090 65 aa5.77□□□□□ -1.49
TRAF3-209ENST00000560463 CASC10Q5T4H9 136 aa5.77□□□□□ -1.49
TRAF3-209ENST00000560463 KRTAP26-1Q6PEX3 210 aa5.77□□□□□ -1.49
TRAF3-209ENST00000560463 MAPKAPK5-AS1Q8N8E1 139 aa5.77□□□□□ -1.49
TRAF3-209ENST00000560463 NDUFA12Q9UI09 145 aa5.77□□□□□ -1.49
TRAF3-209ENST00000560463 ALMS1Q8TCU4 4167 aa5.77□□□□□ -1.49
TRAF3-209ENST00000560463 IGKV2D-24A0A075B6R9 120 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 PRSS2P07478 247 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 CXCL5P42830 114 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 HERV-K104P63124 156 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 C6orf226Q5I0X4 101 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 SCGB1D4Q6XE38 83 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 C2orf91Q6ZV80 131 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 TM2D2Q9BX73 214 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 TTTY13Q9BZ97 58 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 Q9HAA7 133 aa5.76□□□□□ -1.49
TRAF3-209ENST00000560463 NBDYA0A0U1RRE5 68 aa5.75□□□□□ -1.49
TRAF3-209ENST00000560463 CFAP161Q6P656 301 aa5.75□□□□□ -1.49
TRAF3-209ENST00000560463 ORAOV1Q8WV07 137 aa5.75□□□□□ -1.49
TRAF3-209ENST00000560463 TOMM7Q9P0U1 55 aa5.75□□□□□ -1.49
TRAF3-209ENST00000560463 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
TRAF3-209ENST00000560463 LINC00587B1AMM8 73 aa5.74□□□□□ -1.49
TRAF3-209ENST00000560463 TMEM238C9JI98 176 aa5.74□□□□□ -1.49
TRAF3-209ENST00000560463 F8WDY8 70 aa5.74□□□□□ -1.49
TRAF3-209ENST00000560463 CIRBPQ14011 172 aaKnown RBP5.74□□□□□ -1.49
TRAF3-209ENST00000560463 TAL2Q16559 108 aa5.74□□□□□ -1.49
TRAF3-209ENST00000560463 ZNF625Q96I27 306 aaPredicted RBP5.74□□□□□ -1.49
TRAF3-209ENST00000560463 SPANXB1Q9NS25 103 aaPredicted RBP5.74□□□□□ -1.49
TRAF3-209ENST00000560463 TIMM17BO60830 172 aa5.73□□□□□ -1.49
TRAF3-209ENST00000560463 CKS1BP61024 79 aa5.73□□□□□ -1.49
TRAF3-209ENST00000560463 CTAG1AP78358 180 aa5.73□□□□□ -1.49
TRAF3-209ENST00000560463 KIAA0087Q14695 138 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms