RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 GATCO43716 136 aaKnown RBP3.5□□□□□ -1.85
HERC1-208ENST00000560462 S100A4P26447 101 aaKnown RBP3.5□□□□□ -1.85
HERC1-208ENST00000560462 PCOTHQ58A44 107 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 C9orf116Q5BN46 136 aaPredicted RBP3.5□□□□□ -1.85
HERC1-208ENST00000560462 SAPCD1Q5SSQ6 148 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 EIF5AL1Q6IS14 154 aaKnown RBP3.5□□□□□ -1.85
HERC1-208ENST00000560462 TEX43Q6ZNM6 134 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 KRTAP7-1Q8IUC3 87 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 OR2T35Q8NGX2 323 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 PTH2Q96A98 100 aa3.5□□□□□ -1.85
HERC1-208ENST00000560462 TRAV8-4A0A0B4J246 113 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 IGKV3D-20A0A0C4DH25 116 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 MAP1LC3B2A6NCE7 125 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 A8MWV9 139 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 B4DEV8 164 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 G3V3Q6 166 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 M0R036 132 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 ARPC5O15511 151 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 P01737 135 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 MT3P25713 68 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 RAB5CP51148 216 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 PKIAP61925 76 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 UBE2G1P62253 170 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 LGALSLQ3ZCW2 172 aaPredicted RBP3.49□□□□□ -1.85
HERC1-208ENST00000560462 AKR1C8PQ5T2L2 129 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 FAM74A4Q5TZK3 123 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 ZFP2Q6ZN57 461 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 KRTAP11-1Q8IUC1 163 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 C14orf178Q8N769 122 aaPredicted RBP3.49□□□□□ -1.85
HERC1-208ENST00000560462 LINC00469Q8N7U9 141 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 HIST1H2BAQ96A08 127 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 MAP1LC3BQ9GZQ8 125 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 IL36BQ9NZH7 164 aa3.49□□□□□ -1.85
HERC1-208ENST00000560462 TMSB15BA0A087X1C1 80 aa3.48□□□□□ -1.85
HERC1-208ENST00000560462 GRIFINA4D1Z8 144 aa3.48□□□□□ -1.85
HERC1-208ENST00000560462 FABP5P3A8MUU1 101 aa3.48□□□□□ -1.85
HERC1-208ENST00000560462 SH2D1AO60880 128 aa3.48□□□□□ -1.85
HERC1-208ENST00000560462 MT2AP02795 61 aa3.48□□□□□ -1.85
HERC1-208ENST00000560462 ARMS2P0C7Q2 107 aa3.48□□□□□ -1.85
HERC1-208ENST00000560462 AKR1C3P42330 323 aa3.48□□□□□ -1.85
HERC1-208ENST00000560462 REG3AQ06141 175 aa3.48□□□□□ -1.85
HERC1-208ENST00000560462 FMC1Q96HJ9 113 aa3.48□□□□□ -1.85
HERC1-208ENST00000560462 NKX6-2Q9C056 277 aaPredicted RBP3.48□□□□□ -1.85
HERC1-208ENST00000560462 TRBV6-8A0A0A6YYG3 113 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 KRBOX1C9JBD0 128 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 M0R381 172 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 BCL2L11O43521 198 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 TPT1P13693 172 aaKnown RBP3.47□□□□□ -1.85
HERC1-208ENST00000560462 PFN2P35080 140 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 CRIP1P50238 77 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 RGS21Q2M5E4 152 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 KRTAP13-2Q52LG2 175 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 DNLZQ5SXM8 178 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 MRPL55Q7Z7F7 128 aaKnown RBP3.47□□□□□ -1.85
HERC1-208ENST00000560462 DAND5Q8N907 189 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 CYTL1Q9NRR1 136 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 ZFP30Q9Y2G7 519 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 PHLDA3Q9Y5J5 127 aa3.47□□□□□ -1.85
HERC1-208ENST00000560462 GVQW2A0A096LPI5 108 aaPredicted RBP3.46□□□□□ -1.86
HERC1-208ENST00000560462 TRBV6-1A0A0K0K1D8 114 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 A0A1B0GV50 99 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 A0A1B0GW15 77 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 FAM168BA1KXE4 195 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 SMLR1H3BR10 107 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 LTAP01374 205 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 LGALS3P17931 250 aaKnown RBP3.46□□□□□ -1.86
HERC1-208ENST00000560462 RBX1P62877 108 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 RPL18AQ02543 176 aaKnown RBP3.46□□□□□ -1.86
HERC1-208ENST00000560462 ZNF345Q14585 488 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 ZFP82Q8N141 532 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 STOML3Q8TAV4 291 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 FAM213BQ8TBF2 198 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 SFRP2Q96HF1 295 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 TMEM101Q96IK0 257 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 CARD19Q96LW7 228 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 TCEAL7Q9BRU2 100 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 UBE2D4Q9Y2X8 147 aa3.46□□□□□ -1.86
HERC1-208ENST00000560462 LOC107984640A0A0U1RRK4 108 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 ZNF861PO60384 105 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 PFDN1O60925 122 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 MT1FP04733 61 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 UBE2D3P61077 147 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 UBE2D2P62837 147 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 COTL1Q14019 142 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 ZNF56Q15929 161 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 TAL2Q16559 108 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 KCNRGQ8N5I3 272 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 OR10AG1Q8NH19 301 aa3.45□□□□□ -1.86
HERC1-208ENST00000560462 ZNF471Q9BX82 626 aaPredicted RBP3.45□□□□□ -1.86
HERC1-208ENST00000560462 TRBV7-3A0A075B6L6 115 aa3.44□□□□□ -1.86
HERC1-208ENST00000560462 IGHV3OR16-9A0A0B4J2B5 98 aa3.44□□□□□ -1.86
HERC1-208ENST00000560462 TRBV10-1A0A0K0K1A3 114 aa3.44□□□□□ -1.86
HERC1-208ENST00000560462 KANTRA0A1W2PQU2 76 aa3.44□□□□□ -1.86
HERC1-208ENST00000560462 SNAI2O43623 268 aa3.44□□□□□ -1.86
HERC1-208ENST00000560462 CXCL1P09341 107 aa3.44□□□□□ -1.86
HERC1-208ENST00000560462 FGF6P10767 208 aa3.44□□□□□ -1.86
HERC1-208ENST00000560462 SFT2D1Q8WV19 159 aa3.44□□□□□ -1.86
HERC1-208ENST00000560462 ANAPC11Q9NYG5 84 aa3.44□□□□□ -1.86
HERC1-208ENST00000560462 MUC21A0A140T8X8 626 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms