RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 FAT2Q9NYQ8 4349 aa-0.18□□□□□ -2.44
SPG11-222ENST00000560435 HMGXB3Q12766 1538 aa-0.18□□□□□ -2.44
SPG11-222ENST00000560435 ACANP16112 2415 aa-0.18□□□□□ -2.44
SPG11-222ENST00000560435 PHLPP1O60346 1717 aa-0.18□□□□□ -2.44
SPG11-222ENST00000560435 MYH8P13535 1937 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 SHROOM2Q13796 1616 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 DOCK2Q92608 1830 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 UBE2L5PA0A1B0GUS4 154 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 EFCAB10A6NFE3 127 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 MIF4GDA9UHW6 222 aaKnown RBP-0.19□□□□□ -2.44
SPG11-222ENST00000560435 F6UZH7 168 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 CHKB-CPT1BH3BT56 60 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 K7EQZ3 153 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 DLEU1O43261 78 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 MGPP08493 103 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 IGLC1P0CG04 106 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 AKAIN1P0CW23 69 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 UBE2L3P68036 154 aaKnown RBP-0.19□□□□□ -2.44
SPG11-222ENST00000560435 WHAMMP3Q1A5X7 153 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 NXT2Q9NPJ8 142 aaKnown RBP-0.19□□□□□ -2.44
SPG11-222ENST00000560435 IER3IP1Q9Y5U9 82 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 WDR7Q9Y4E6 1490 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 HECTD4Q9Y4D8 3996 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 ARHGEF5Q12774 1597 aa-0.19□□□□□ -2.44
SPG11-222ENST00000560435 ROCK2O75116 1388 aaKnown RBP-0.19□□□□□ -2.44
SPG11-222ENST00000560435 PSME4Q14997 1843 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 TET3O43151 1660 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 ROBO1Q9Y6N7 1651 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 MYH7P12883 1935 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 GAPVD1Q14C86 1478 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 MAGI1Q96QZ7 1491 aaPredicted RBP-0.2□□□□□ -2.44
SPG11-222ENST00000560435 FXYD6-FXYD2A0A087WZ82 144 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 TRBV7-4A0A0J9YYF1 115 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 LINC00959A0A1B0GUT2 108 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 CORTO00230 105 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 C10orf113Q5VZT2 155 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 RPL13AP3Q6NVV1 102 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 FAM107BQ9H098 131 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 LINC00846Q9NV44 126 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 ZFHX3Q15911 3703 aa-0.2□□□□□ -2.44
SPG11-222ENST00000560435 KTN1Q86UP2 1357 aaKnown RBP-0.2□□□□□ -2.44
SPG11-222ENST00000560435 SCAPERQ9BY12 1400 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 URB1O60287 2271 aaKnown RBP-0.21□□□□□ -2.44
SPG11-222ENST00000560435 POLA1P09884 1462 aaPredicted RBP-0.21□□□□□ -2.44
SPG11-222ENST00000560435 MRC2Q9UBG0 1479 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 A0A1B0GV90 55 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 FAM24AA6NFZ4 105 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 H3BQ15 152 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 SPINK4O60575 86 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 ATP5EP56381 51 aaPredicted RBP-0.21□□□□□ -2.44
SPG11-222ENST00000560435 UBE2D3P61077 147 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 UBE2D2P62837 147 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 Q0VG73 95 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 KRTAP19-7Q3SYF9 63 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 C9orf153Q5TBE3 101 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 FAM223AQ8IWN6 122 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 UQCR10Q9UDW1 63 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 ARL2-SNX15V9GYD0 113 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 ALMS1Q8TCU4 4167 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 NALCNQ8IZF0 1738 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 BSNQ9UPA5 3926 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 LRP1BQ9NZR2 4599 aa-0.21□□□□□ -2.44
SPG11-222ENST00000560435 ADGRL2O95490 1459 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 MYOM2P54296 1465 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 REV3LO60673 3130 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 EHBP1L1Q8N3D4 1523 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 ARHGEF12Q9NZN5 1544 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 SETD2Q9BYW2 2564 aaPredicted RBP-0.22□□□□□ -2.44
SPG11-222ENST00000560435 DIP2CQ9Y2E4 1556 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 COX6CP09669 75 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 GNG4P50150 75 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 GNG11P61952 73 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 UBA52P62987 128 aaKnown RBP-0.22□□□□□ -2.44
SPG11-222ENST00000560435 PPP3R1P63098 170 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 DEFB105AQ8NG35 78 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 LINC01600Q96MT4 127 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 C2orf88Q9BSF0 95 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 FAIMQ9NVQ4 179 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 PRO1854Q9UHT4 67 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 COL4A6Q14031 1691 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 AKAP13Q12802 2813 aa-0.22□□□□□ -2.44
SPG11-222ENST00000560435 BTAF1O14981 1849 aa-0.22□□□□□ -2.45
SPG11-222ENST00000560435 TSC2P49815 1807 aa-0.22□□□□□ -2.45
SPG11-222ENST00000560435 SVEP1Q4LDE5 3571 aa-0.22□□□□□ -2.45
SPG11-222ENST00000560435 C1orf167Q5SNV9 1468 aa-0.22□□□□□ -2.45
SPG11-222ENST00000560435 CNOT1A5YKK6 2376 aaKnown RBP-0.23□□□□□ -2.45
SPG11-222ENST00000560435 PRKDCP78527 4128 aaKnown RBP-0.23□□□□□ -2.45
SPG11-222ENST00000560435 MXRA5Q9NR99 2828 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 MAPKBP1O60336 1514 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 PRRC2CQ9Y520 2896 aaKnown RBP-0.23□□□□□ -2.45
SPG11-222ENST00000560435 SETBP1Q9Y6X0 1596 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 MUC12Q9UKN1 5478 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 KDM5AP29375 1690 aaKnown RBP-0.23□□□□□ -2.45
SPG11-222ENST00000560435 DNAJC13O75165 2243 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 A0A1B0GWA3 101 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 NAP1L6A6NFF2 107 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 FAM223BA6NKX1 122 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 TMEM262E9PQX1 116 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 M0R2T5 61 aa-0.23□□□□□ -2.45
SPG11-222ENST00000560435 SNAPC5O75971 98 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms