RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 SCGB3A1Q96QR1 104 aa5.54□□□□□ -1.52
USP3-217ENST00000560070 KRTAP4-5Q9BYR2 181 aa5.54□□□□□ -1.52
USP3-217ENST00000560070 VCX2Q9H322 139 aa5.54□□□□□ -1.52
USP3-217ENST00000560070 PYGO1Q9Y3Y4 419 aa5.54□□□□□ -1.52
USP3-217ENST00000560070 IGHV1-58A0A0C4DH39 117 aa5.53□□□□□ -1.52
USP3-217ENST00000560070 COX6A2Q02221 97 aa5.53□□□□□ -1.52
USP3-217ENST00000560070 Q6ZN92 141 aa5.53□□□□□ -1.52
USP3-217ENST00000560070 TEX43Q6ZNM6 134 aa5.53□□□□□ -1.52
USP3-217ENST00000560070 C9orf163Q8N9P6 203 aa5.53□□□□□ -1.52
USP3-217ENST00000560070 TOMM6Q96B49 74 aa5.53□□□□□ -1.52
USP3-217ENST00000560070 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
USP3-217ENST00000560070 PKHD1P08F94 4074 aa5.53□□□□□ -1.52
USP3-217ENST00000560070 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.52□□□□□ -1.53
USP3-217ENST00000560070 IGIPA6NJ69 53 aa5.52□□□□□ -1.53
USP3-217ENST00000560070 ZNF561-AS1K7EIQ3 104 aa5.52□□□□□ -1.53
USP3-217ENST00000560070 SCO1O75880 301 aa5.52□□□□□ -1.53
USP3-217ENST00000560070 LINC00614P0C842 121 aa5.52□□□□□ -1.53
USP3-217ENST00000560070 PMCHL1Q16048 86 aa5.52□□□□□ -1.53
USP3-217ENST00000560070 SDIM1Q6ZPB5 146 aa5.52□□□□□ -1.53
USP3-217ENST00000560070 IGLV4-69A0A075B6H9 119 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 K7EMI3 77 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 G0S2P27469 103 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 LINC00242Q5T6M2 205 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 Q8N1X5 172 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 C18orf32Q8TCD1 76 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 URB1-AS1Q96HZ7 61 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 C2orf88Q9BSF0 95 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 KRTAP4-2Q9BYR5 136 aa5.51□□□□□ -1.53
USP3-217ENST00000560070 LRP1BQ9NZR2 4599 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 GVQW2A0A096LPI5 108 aaPredicted RBP5.5□□□□□ -1.53
USP3-217ENST00000560070 A0A0J9YXV3 536 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 PANO1I0J062 215 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 APOMO95445 188 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 TRGC2P03986 189 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 CHTF8P0CG12 524 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 UBE2D1P51668 147 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 NDUFA6P56556 154 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 CNBPP62633 177 aaKnown RBP5.5□□□□□ -1.53
USP3-217ENST00000560070 SYCNQ0VAF6 134 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 ERASQ7Z444 233 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 CIRBP-AS1Q8TBR5 109 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 ORAOV1Q8WV07 137 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 AMELXQ99217 191 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 KIAA1109Q2LD37 5005 aa5.5□□□□□ -1.53
USP3-217ENST00000560070 IGHV3OR16-9A0A0B4J2B5 98 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 IGKV2-24A0A0C4DH68 120 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 LINC01546A6NGU7 62 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 EPM2AB3EWF7 344 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 SPAG11BQ08648 103 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 LINC00173Q6ZV60 143 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 SCXQ7RTU7 201 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 CAMK2N2Q96S95 79 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 CHAC1Q9BUX1 264 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.49□□□□□ -1.53
USP3-217ENST00000560070 DNAH5Q8TE73 4624 aa5.49□□□□□ -1.53
USP3-217ENST00000560070 HERC2O95714 4834 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 COLCA2A8K830 154 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 RAB5BP61020 215 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 PAPPA-AS1Q5QFB9 102 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 Q6ZRU5 148 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 Q6ZSA8 131 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 BAGE3Q86Y29 109 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 CARD19Q96LW7 228 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 TIMM17AQ99595 171 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 GEMIN7Q9H840 131 aaKnown RBP5.48□□□□□ -1.53
USP3-217ENST00000560070 TOMM7Q9P0U1 55 aa5.48□□□□□ -1.53
USP3-217ENST00000560070 A0A087WZ39 114 aa5.47□□□□□ -1.53
USP3-217ENST00000560070 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.47□□□□□ -1.53
USP3-217ENST00000560070 GAGE2BQ13066 116 aa5.47□□□□□ -1.53
USP3-217ENST00000560070 MAJINQ3KP22 176 aa5.47□□□□□ -1.53
USP3-217ENST00000560070 Q5VSD8 79 aa5.47□□□□□ -1.53
USP3-217ENST00000560070 UNQ6190/PRO20217Q6UXQ8 127 aa5.47□□□□□ -1.53
USP3-217ENST00000560070 CST9LQ9H4G1 147 aa5.47□□□□□ -1.53
USP3-217ENST00000560070 RYR1P21817 5038 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 A0A096LNJ9 63 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 NPSP0C0P6 89 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 PMVKQ15126 192 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 C6orf226Q5I0X4 101 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 C10orf25Q5T742 122 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 FAM19A2Q8N3H0 131 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 LINC00469Q8N7U9 141 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 OR10D4PQ8NGN7 298 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
USP3-217ENST00000560070 A0A087WYN8 130 aa5.45□□□□□ -1.54
USP3-217ENST00000560070 A0A096LNI7 61 aa5.45□□□□□ -1.54
USP3-217ENST00000560070 LINC01549A6NIU2 74 aa5.45□□□□□ -1.54
USP3-217ENST00000560070 HBDP02042 147 aa5.45□□□□□ -1.54
USP3-217ENST00000560070 PRSS2P07478 247 aa5.45□□□□□ -1.54
USP3-217ENST00000560070 PDZD11Q5EBL8 140 aa5.45□□□□□ -1.54
USP3-217ENST00000560070 C2orf82Q6UX34 121 aa5.45□□□□□ -1.54
USP3-217ENST00000560070 STPG4Q8N801 248 aa5.45□□□□□ -1.54
USP3-217ENST00000560070 C2orf48Q96LS8 159 aa5.45□□□□□ -1.54
USP3-217ENST00000560070 LOC107984640A0A0U1RRK4 108 aa5.44□□□□□ -1.54
USP3-217ENST00000560070 TINCRA0A1B0GVN0 87 aa5.44□□□□□ -1.54
USP3-217ENST00000560070 SPINK8P0C7L1 97 aa5.44□□□□□ -1.54
USP3-217ENST00000560070 INAFM2P0DMQ5 153 aa5.44□□□□□ -1.54
USP3-217ENST00000560070 HERVK_113P63121 156 aa5.44□□□□□ -1.54
USP3-217ENST00000560070 SEC11AP67812 179 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms