RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 RAB4AP20338 218 aa9.49□□□□□ -0.89
AC243562.3-201ENST00000559866 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
AC243562.3-201ENST00000559866 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
AC243562.3-201ENST00000559866 AMN1Q8IY45 258 aa9.49□□□□□ -0.89
AC243562.3-201ENST00000559866 TMEM18Q96B42 140 aa9.49□□□□□ -0.89
AC243562.3-201ENST00000559866 KIR2DL4Q99706 377 aa9.49□□□□□ -0.89
AC243562.3-201ENST00000559866 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
AC243562.3-201ENST00000559866 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
AC243562.3-201ENST00000559866 TRAV13-1A0A0B4J241 112 aa9.48□□□□□ -0.89
AC243562.3-201ENST00000559866 A0A1B0GXF2 115 aa9.48□□□□□ -0.89
AC243562.3-201ENST00000559866 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
AC243562.3-201ENST00000559866 NDUFA5Q16718 116 aa9.48□□□□□ -0.89
AC243562.3-201ENST00000559866 MRPL54Q6P161 138 aaKnown RBP9.48□□□□□ -0.89
AC243562.3-201ENST00000559866 UBE2D4Q9Y2X8 147 aa9.48□□□□□ -0.89
AC243562.3-201ENST00000559866 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.47□□□□□ -0.89
AC243562.3-201ENST00000559866 RHEBQ15382 184 aa9.47□□□□□ -0.89
AC243562.3-201ENST00000559866 RNASE13Q5GAN3 156 aaKnown RBP9.47□□□□□ -0.89
AC243562.3-201ENST00000559866 FAM104BQ5XKR9 115 aa9.47□□□□□ -0.89
AC243562.3-201ENST00000559866 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
AC243562.3-201ENST00000559866 SUMO2P61956 95 aaKnown RBP9.46□□□□□ -0.9
AC243562.3-201ENST00000559866 OR10D4PQ8NGN7 298 aa9.46□□□□□ -0.9
AC243562.3-201ENST00000559866 TRAV9-1A0A075B6T8 112 aa9.45□□□□□ -0.9
AC243562.3-201ENST00000559866 SMKR1H3BMG3 65 aa9.45□□□□□ -0.9
AC243562.3-201ENST00000559866 RNF151Q2KHN1 245 aa9.45□□□□□ -0.9
AC243562.3-201ENST00000559866 Q6ZUT4 128 aa9.45□□□□□ -0.9
AC243562.3-201ENST00000559866 PHF5AQ7RTV0 110 aaKnown RBP9.45□□□□□ -0.9
AC243562.3-201ENST00000559866 DIRC1Q969H9 104 aa9.45□□□□□ -0.9
AC243562.3-201ENST00000559866 PPBPP02775 128 aa9.44□□□□□ -0.9
AC243562.3-201ENST00000559866 S100PP25815 95 aa9.44□□□□□ -0.9
AC243562.3-201ENST00000559866 SVBPQ8N300 66 aa9.44□□□□□ -0.9
AC243562.3-201ENST00000559866 OPRPNQ99935 248 aaPredicted RBP9.44□□□□□ -0.9
AC243562.3-201ENST00000559866 F8WDY8 70 aa9.43□□□□□ -0.9
AC243562.3-201ENST00000559866 TCAPO15273 167 aa9.43□□□□□ -0.9
AC243562.3-201ENST00000559866 CKS2P33552 79 aa9.43□□□□□ -0.9
AC243562.3-201ENST00000559866 MRPL51Q4U2R6 128 aaKnown RBP9.43□□□□□ -0.9
AC243562.3-201ENST00000559866 ORAOV1Q8WV07 137 aa9.43□□□□□ -0.9
AC243562.3-201ENST00000559866 TIMM21Q9BVV7 248 aa9.43□□□□□ -0.9
AC243562.3-201ENST00000559866 SNAPINO95295 136 aa9.42□□□□□ -0.9
AC243562.3-201ENST00000559866 APOC3P02656 99 aa9.42□□□□□ -0.9
AC243562.3-201ENST00000559866 PRR4Q16378 134 aa9.42□□□□□ -0.9
AC243562.3-201ENST00000559866 NRACQ8N912 160 aa9.42□□□□□ -0.9
AC243562.3-201ENST00000559866 RPS10P5Q9NQ39 176 aa9.42□□□□□ -0.9
AC243562.3-201ENST00000559866 MRPL35Q9NZE8 188 aaKnown RBP9.42□□□□□ -0.9
AC243562.3-201ENST00000559866 TRBV24-1A0A075B6N3 115 aa9.41□□□□□ -0.9
AC243562.3-201ENST00000559866 A0A087WZ39 114 aa9.41□□□□□ -0.9
AC243562.3-201ENST00000559866 A0A0U1RQV1 116 aa9.41□□□□□ -0.9
AC243562.3-201ENST00000559866 NDUFA1O15239 70 aa9.41□□□□□ -0.9
AC243562.3-201ENST00000559866 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
AC243562.3-201ENST00000559866 KRTAP11-1Q8IUC1 163 aa9.41□□□□□ -0.9
AC243562.3-201ENST00000559866 C20orf78Q9BR46 151 aa9.41□□□□□ -0.9
AC243562.3-201ENST00000559866 ORMDL3Q8N138 153 aa9.4□□□□□ -0.9
AC243562.3-201ENST00000559866 D6R8Y8 96 aa9.39□□□□□ -0.91
AC243562.3-201ENST00000559866 H0Y9J4 135 aa9.39□□□□□ -0.91
AC243562.3-201ENST00000559866 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
AC243562.3-201ENST00000559866 RPL32P62910 135 aaKnown RBP9.39□□□□□ -0.91
AC243562.3-201ENST00000559866 LAMTOR2Q9Y2Q5 125 aa9.39□□□□□ -0.91
AC243562.3-201ENST00000559866 IGLV1-50A0A075B6I6 118 aa9.38□□□□□ -0.91
AC243562.3-201ENST00000559866 TNFRSF6BO95407 300 aa9.38□□□□□ -0.91
AC243562.3-201ENST00000559866 COX19Q49B96 90 aa9.38□□□□□ -0.91
AC243562.3-201ENST00000559866 TMEM136Q6ZRR5 245 aa9.38□□□□□ -0.91
AC243562.3-201ENST00000559866 FAM19A5Q7Z5A7 132 aaPredicted RBP9.38□□□□□ -0.91
AC243562.3-201ENST00000559866 SPANXA1Q9NS26 97 aa9.38□□□□□ -0.91
AC243562.3-201ENST00000559866 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
AC243562.3-201ENST00000559866 UBE2D1P51668 147 aa9.37□□□□□ -0.91
AC243562.3-201ENST00000559866 UBE2BP63146 152 aa9.37□□□□□ -0.91
AC243562.3-201ENST00000559866 TGIF2-C20orf24A0A0A6YYL0 155 aa9.36□□□□□ -0.91
AC243562.3-201ENST00000559866 TLX1NBP0CAT3 122 aa9.36□□□□□ -0.91
AC243562.3-201ENST00000559866 PRELID3AQ96N28 172 aa9.36□□□□□ -0.91
AC243562.3-201ENST00000559866 IGHV3OR16-9A0A0B4J2B5 98 aa9.35□□□□□ -0.91
AC243562.3-201ENST00000559866 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
AC243562.3-201ENST00000559866 NPYP01303 97 aa9.35□□□□□ -0.91
AC243562.3-201ENST00000559866 RPL39P62891 51 aaKnown RBP9.35□□□□□ -0.91
AC243562.3-201ENST00000559866 MRPS36P82909 103 aaKnown RBP9.35□□□□□ -0.91
AC243562.3-201ENST00000559866 GAGE2EQ4V326 116 aa9.35□□□□□ -0.91
AC243562.3-201ENST00000559866 SMIM2Q9BVW6 85 aa9.35□□□□□ -0.91
AC243562.3-201ENST00000559866 GNB1LQ9BYB4 327 aa9.35□□□□□ -0.91
AC243562.3-201ENST00000559866 GAGE2DQ9UEU5 116 aa9.35□□□□□ -0.91
AC243562.3-201ENST00000559866 M0QXV9 152 aa9.34□□□□□ -0.91
AC243562.3-201ENST00000559866 SLC7A5P1Q8MH63 180 aa9.34□□□□□ -0.91
AC243562.3-201ENST00000559866 C6orf48Q9UBA6 75 aa9.34□□□□□ -0.91
AC243562.3-201ENST00000559866 PRSS47A8MTI9 375 aa9.33□□□□□ -0.92
AC243562.3-201ENST00000559866 IFI27P40305 119 aaPredicted RBP9.33□□□□□ -0.92
AC243562.3-201ENST00000559866 RPL13AP40429 203 aaKnown RBP9.33□□□□□ -0.92
AC243562.3-201ENST00000559866 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
AC243562.3-201ENST00000559866 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
AC243562.3-201ENST00000559866 MAP1LC3AQ9H492 121 aa9.33□□□□□ -0.92
AC243562.3-201ENST00000559866 MUC17Q685J3 4493 aa9.33□□□□□ -0.92
AC243562.3-201ENST00000559866 TRBV30A0A0K0K1B3 111 aa9.31□□□□□ -0.92
AC243562.3-201ENST00000559866 RAB5AP20339 215 aa9.31□□□□□ -0.92
AC243562.3-201ENST00000559866 PACRGQ96M98 296 aaPredicted RBP9.31□□□□□ -0.92
AC243562.3-201ENST00000559866 K7EMI3 77 aa9.3□□□□□ -0.92
AC243562.3-201ENST00000559866 NDUFC2-KCTD14E9PQ53 114 aa9.29□□□□□ -0.92
AC243562.3-201ENST00000559866 NXT2Q9NPJ8 142 aaKnown RBP9.29□□□□□ -0.92
AC243562.3-201ENST00000559866 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
AC243562.3-201ENST00000559866 Q8N8P6 123 aa9.28□□□□□ -0.92
AC243562.3-201ENST00000559866 FAM104AQ969W3 186 aa9.28□□□□□ -0.92
AC243562.3-201ENST00000559866 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
AC243562.3-201ENST00000559866 SMCO4Q9NRQ5 59 aa9.28□□□□□ -0.92
AC243562.3-201ENST00000559866 LOC389332A0A1B0GUA5 103 aa9.27□□□□□ -0.93
AC243562.3-201ENST00000559866 FABP9Q0Z7S8 132 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms