RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 GAGE12HA6NDE8 117 aa5.75□□□□□ -1.49
LRRC28-215ENST00000559774 PRSS29PA6NIE9 313 aa5.75□□□□□ -1.49
LRRC28-215ENST00000559774 COX7A2LO14548 114 aa5.75□□□□□ -1.49
LRRC28-215ENST00000559774 APOMO95445 188 aa5.75□□□□□ -1.49
LRRC28-215ENST00000559774 XCL1P47992 114 aa5.75□□□□□ -1.49
LRRC28-215ENST00000559774 SPATA12Q7Z6I5 190 aa5.75□□□□□ -1.49
LRRC28-215ENST00000559774 MAPKAPK5-AS1Q8N8E1 139 aa5.75□□□□□ -1.49
LRRC28-215ENST00000559774 MAP1LC3CQ9BXW4 147 aa5.75□□□□□ -1.49
LRRC28-215ENST00000559774 IGLV5-45A0A087WSX0 123 aa5.74□□□□□ -1.49
LRRC28-215ENST00000559774 A0A087WZ39 114 aa5.74□□□□□ -1.49
LRRC28-215ENST00000559774 IGHV1-58A0A0C4DH39 117 aa5.74□□□□□ -1.49
LRRC28-215ENST00000559774 GEMIN7Q9H840 131 aaKnown RBP5.74□□□□□ -1.49
LRRC28-215ENST00000559774 DNAH17Q9UFH2 4485 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 C5orf52A6NGY3 159 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 F8VRH5 84 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 F8WDY8 70 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 IGLC3P0DOY3 106 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 FABP4P15090 132 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 MALP21145 153 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 SMCPP49901 116 aaPredicted RBP5.73□□□□□ -1.49
LRRC28-215ENST00000559774 AKR1D1P51857 326 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 TNP2Q05952 138 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 NTN5Q8WTR8 489 aaPredicted RBP5.73□□□□□ -1.49
LRRC28-215ENST00000559774 PGPEP1Q9NXJ5 209 aa5.73□□□□□ -1.49
LRRC28-215ENST00000559774 DNAH10Q8IVF4 4471 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 GVQW2A0A096LPI5 108 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-215ENST00000559774 A0A0J9YXV3 536 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 H3BRM9 83 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 J3QL48 77 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 S100A2P29034 98 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 ZC2HC1BQ5TFG8 222 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 CDPF1Q6NVV7 123 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 PET117Q6UWS5 81 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 HIST3H2BBQ8N257 126 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 Q8N814 137 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 OR10D4PQ8NGN7 298 aa5.72□□□□□ -1.49
LRRC28-215ENST00000559774 CHTOPQ9Y3Y2 248 aaKnown RBP5.72□□□□□ -1.49
LRRC28-215ENST00000559774 IGLV4-69A0A075B6H9 119 aa5.71□□□□□ -1.5
LRRC28-215ENST00000559774 IGHV3-64A0A075B6Q5 118 aa5.71□□□□□ -1.5
LRRC28-215ENST00000559774 SYS1-DBNDD2H3BUS1 97 aa5.71□□□□□ -1.5
LRRC28-215ENST00000559774 PLNP26678 52 aa5.71□□□□□ -1.5
LRRC28-215ENST00000559774 COX6A2Q02221 97 aa5.71□□□□□ -1.5
LRRC28-215ENST00000559774 ODF1Q14990 250 aa5.71□□□□□ -1.5
LRRC28-215ENST00000559774 C5orf38Q86SI9 138 aa5.71□□□□□ -1.5
LRRC28-215ENST00000559774 A0A1B0GVY2 172 aa5.7□□□□□ -1.5
LRRC28-215ENST00000559774 ZNF561-AS1K7EIQ3 104 aa5.7□□□□□ -1.5
LRRC28-215ENST00000559774 SNRPEP62304 92 aaKnown RBP5.7□□□□□ -1.5
LRRC28-215ENST00000559774 CNBPP62633 177 aaKnown RBP5.7□□□□□ -1.5
LRRC28-215ENST00000559774 LCE2AQ5TA79 106 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-215ENST00000559774 LINC00469Q8N7U9 141 aa5.7□□□□□ -1.5
LRRC28-215ENST00000559774 C15orf56Q8N910 161 aa5.7□□□□□ -1.5
LRRC28-215ENST00000559774 C2orf48Q96LS8 159 aa5.7□□□□□ -1.5
LRRC28-215ENST00000559774 HIST1H2BLQ99880 126 aa5.7□□□□□ -1.5
LRRC28-215ENST00000559774 CHAC1Q9BUX1 264 aa5.7□□□□□ -1.5
LRRC28-215ENST00000559774 MRPL35Q9NZE8 188 aaKnown RBP5.7□□□□□ -1.5
LRRC28-215ENST00000559774 CDKN2A-AS1Q9UH64 79 aa5.7□□□□□ -1.5
LRRC28-215ENST00000559774 FAT2Q9NYQ8 4349 aa5.7□□□□□ -1.5
LRRC28-215ENST00000559774 FRAS1Q86XX4 4008 aa5.69□□□□□ -1.5
LRRC28-215ENST00000559774 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.69□□□□□ -1.5
LRRC28-215ENST00000559774 C11orf86A6NJI1 115 aa5.69□□□□□ -1.5
LRRC28-215ENST00000559774 DPM2O94777 84 aa5.69□□□□□ -1.5
LRRC28-215ENST00000559774 WFDC2Q14508 124 aa5.69□□□□□ -1.5
LRRC28-215ENST00000559774 LINC01545Q5VT33 79 aa5.69□□□□□ -1.5
LRRC28-215ENST00000559774 hDV102S1A0JD36 115 aa5.68□□□□□ -1.5
LRRC28-215ENST00000559774 C20orf202A1L168 122 aa5.68□□□□□ -1.5
LRRC28-215ENST00000559774 SMIM1B2RUZ4 78 aa5.68□□□□□ -1.5
LRRC28-215ENST00000559774 C3orf79P0CE67 100 aa5.68□□□□□ -1.5
LRRC28-215ENST00000559774 ZNF22P17026 224 aaPredicted RBP5.68□□□□□ -1.5
LRRC28-215ENST00000559774 CXCL5P42830 114 aa5.68□□□□□ -1.5
LRRC28-215ENST00000559774 SFTA2Q6UW10 78 aa5.68□□□□□ -1.5
LRRC28-215ENST00000559774 Q8IZM0 81 aa5.68□□□□□ -1.5
LRRC28-215ENST00000559774 PKIGQ9Y2B9 76 aa5.68□□□□□ -1.5
LRRC28-215ENST00000559774 IGLV5-39A0A0G2JS06 123 aa5.67□□□□□ -1.5
LRRC28-215ENST00000559774 H0Y8G0 127 aa5.67□□□□□ -1.5
LRRC28-215ENST00000559774 LECT2O14960 151 aa5.67□□□□□ -1.5
LRRC28-215ENST00000559774 IGKCP01834 107 aa5.67□□□□□ -1.5
LRRC28-215ENST00000559774 SPAG11BQ08648 103 aa5.67□□□□□ -1.5
LRRC28-215ENST00000559774 KIAA0087Q14695 138 aa5.67□□□□□ -1.5
LRRC28-215ENST00000559774 RNF151Q2KHN1 245 aa5.67□□□□□ -1.5
LRRC28-215ENST00000559774 TMEM170BQ5T4T1 132 aa5.67□□□□□ -1.5
LRRC28-215ENST00000559774 ORAOV1Q8WV07 137 aa5.67□□□□□ -1.5
LRRC28-215ENST00000559774 IGLV5-52A0A0A0MRZ9 124 aa5.66□□□□□ -1.5
LRRC28-215ENST00000559774 TMEM223A0PJW6 202 aa5.66□□□□□ -1.5
LRRC28-215ENST00000559774 PRSS2P07478 247 aa5.66□□□□□ -1.5
LRRC28-215ENST00000559774 KRTDAPP60985 99 aa5.66□□□□□ -1.5
LRRC28-215ENST00000559774 C6orf226Q5I0X4 101 aa5.66□□□□□ -1.5
LRRC28-215ENST00000559774 C9orf163Q8N9P6 203 aa5.66□□□□□ -1.5
LRRC28-215ENST00000559774 NDUFA1O15239 70 aa5.65□□□□□ -1.5
LRRC28-215ENST00000559774 KRTAP10-2P60368 255 aa5.65□□□□□ -1.5
LRRC28-215ENST00000559774 CKS1BP61024 79 aa5.65□□□□□ -1.5
LRRC28-215ENST00000559774 HERVK_113P61574 105 aa5.65□□□□□ -1.5
LRRC28-215ENST00000559774 SYCNQ0VAF6 134 aa5.65□□□□□ -1.5
LRRC28-215ENST00000559774 HIGD2BQ4VC39 106 aa5.65□□□□□ -1.5
LRRC28-215ENST00000559774 COX7B2Q8TF08 81 aa5.65□□□□□ -1.5
LRRC28-215ENST00000559774 PKD1P98161 4303 aa5.65□□□□□ -1.51
LRRC28-215ENST00000559774 DNAH11Q96DT5 4516 aa5.64□□□□□ -1.51
LRRC28-215ENST00000559774 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.64□□□□□ -1.51
LRRC28-215ENST00000559774 TRBV30A0A0K0K1B3 111 aa5.64□□□□□ -1.51
LRRC28-215ENST00000559774 SLPIP03973 132 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms