RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 IGHV1-58A0A0C4DH39 117 aa13.15□□□□□ -0.3
TSPAN3-207ENST00000559494 LINC01549A6NIU2 74 aa13.15□□□□□ -0.3
TSPAN3-207ENST00000559494 COX7A2LO14548 114 aa13.15□□□□□ -0.3
TSPAN3-207ENST00000559494 CDK2AP2O75956 126 aa13.15□□□□□ -0.3
TSPAN3-207ENST00000559494 UBE2D1P51668 147 aa13.15□□□□□ -0.3
TSPAN3-207ENST00000559494 PMCHL1Q16048 86 aa13.15□□□□□ -0.3
TSPAN3-207ENST00000559494 LINC00242Q5T6M2 205 aa13.15□□□□□ -0.3
TSPAN3-207ENST00000559494 GVQW2A0A096LPI5 108 aaPredicted RBP13.14□□□□□ -0.31
TSPAN3-207ENST00000559494 COX6A2Q02221 97 aa13.14□□□□□ -0.31
TSPAN3-207ENST00000559494 BAGE3Q86Y29 109 aa13.14□□□□□ -0.31
TSPAN3-207ENST00000559494 FAM30AQ9NZY2 134 aa13.14□□□□□ -0.31
TSPAN3-207ENST00000559494 CNBPP62633 177 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-207ENST00000559494 PAPPA-AS1Q5QFB9 102 aa13.13□□□□□ -0.31
TSPAN3-207ENST00000559494 C9orf163Q8N9P6 203 aa13.13□□□□□ -0.31
TSPAN3-207ENST00000559494 C2orf88Q9BSF0 95 aa13.13□□□□□ -0.31
TSPAN3-207ENST00000559494 MALP21145 153 aa13.13□□□□□ -0.31
TSPAN3-207ENST00000559494 LINC00310P59036 64 aa13.13□□□□□ -0.31
TSPAN3-207ENST00000559494 LINC00526Q96FQ7 95 aa13.13□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST1H2BKO60814 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST1H2BJP06899 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST1H2BOP23527 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST1H2BBP33778 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 XGP55808 180 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST1H2BDP58876 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST1H2BCP62807 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST2H2BEQ16778 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST1H2BHQ93079 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 CHCHD1Q96BP2 118 aaKnown RBP13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST1H2BNQ99877 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HIST1H2BMQ99879 126 aa13.12□□□□□ -0.31
TSPAN3-207ENST00000559494 HBDP02042 147 aa13.11□□□□□ -0.31
TSPAN3-207ENST00000559494 SERF1AO75920 110 aa13.1□□□□□ -0.31
TSPAN3-207ENST00000559494 PDZD11Q5EBL8 140 aa13.1□□□□□ -0.31
TSPAN3-207ENST00000559494 FAM19A3Q7Z5A8 133 aa13.1□□□□□ -0.31
TSPAN3-207ENST00000559494 NUPR1O60356 82 aa13.09□□□□□ -0.31
TSPAN3-207ENST00000559494 A0A087WZ39 114 aa13.08□□□□□ -0.32
TSPAN3-207ENST00000559494 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.08□□□□□ -0.32
TSPAN3-207ENST00000559494 Q6ZSA8 131 aa13.08□□□□□ -0.32
TSPAN3-207ENST00000559494 CST9LQ9H4G1 147 aa13.08□□□□□ -0.32
TSPAN3-207ENST00000559494 IGHV3-64A0A075B6Q5 118 aa13.07□□□□□ -0.32
TSPAN3-207ENST00000559494 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.07□□□□□ -0.32
TSPAN3-207ENST00000559494 A0A0J9YXV3 536 aa13.07□□□□□ -0.32
TSPAN3-207ENST00000559494 ZNF561-AS1K7EIQ3 104 aa13.07□□□□□ -0.32
TSPAN3-207ENST00000559494 APOMO95445 188 aa13.07□□□□□ -0.32
TSPAN3-207ENST00000559494 SDIM1Q6ZPB5 146 aa13.07□□□□□ -0.32
TSPAN3-207ENST00000559494 FAM19A2Q8N3H0 131 aa13.07□□□□□ -0.32
TSPAN3-207ENST00000559494 IGLV4-69A0A075B6H9 119 aa13.06□□□□□ -0.32
TSPAN3-207ENST00000559494 HSBP1O75506 76 aa13.06□□□□□ -0.32
TSPAN3-207ENST00000559494 HAMPP81172 84 aa13.06□□□□□ -0.32
TSPAN3-207ENST00000559494 PMVKQ15126 192 aa13.06□□□□□ -0.32
TSPAN3-207ENST00000559494 SEC11AP67812 179 aa13.04□□□□□ -0.32
TSPAN3-207ENST00000559494 ORAOV1Q8WV07 137 aa13.04□□□□□ -0.32
TSPAN3-207ENST00000559494 ATP5LO75964 103 aa13.03□□□□□ -0.32
TSPAN3-207ENST00000559494 HERVK_113P63121 156 aa13.03□□□□□ -0.32
TSPAN3-207ENST00000559494 SPAG11BQ08648 103 aa13.03□□□□□ -0.32
TSPAN3-207ENST00000559494 LINC01561Q8N1V8 128 aa13.03□□□□□ -0.32
TSPAN3-207ENST00000559494 OR10D4PQ8NGN7 298 aa13.03□□□□□ -0.32
TSPAN3-207ENST00000559494 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
TSPAN3-207ENST00000559494 FAT1Q14517 4588 aa13.02□□□□□ -0.33
TSPAN3-207ENST00000559494 SYCNQ0VAF6 134 aa13.02□□□□□ -0.33
TSPAN3-207ENST00000559494 C2orf48Q96LS8 159 aa13.02□□□□□ -0.33
TSPAN3-207ENST00000559494 GEMIN7Q9H840 131 aaKnown RBP13.02□□□□□ -0.33
TSPAN3-207ENST00000559494 TINCRA0A1B0GVN0 87 aa13.01□□□□□ -0.33
TSPAN3-207ENST00000559494 NDUFA6P56556 154 aa13.01□□□□□ -0.33
TSPAN3-207ENST00000559494 Q6ZRU5 148 aa13.01□□□□□ -0.33
TSPAN3-207ENST00000559494 KIAA0087Q14695 138 aa13□□□□□ -0.33
TSPAN3-207ENST00000559494 CARD19Q96LW7 228 aa13□□□□□ -0.33
TSPAN3-207ENST00000559494 PANO1I0J062 215 aa12.99□□□□□ -0.33
TSPAN3-207ENST00000559494 CAMK2N2Q96S95 79 aa12.99□□□□□ -0.33
TSPAN3-207ENST00000559494 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.99□□□□□ -0.33
TSPAN3-207ENST00000559494 IFI27L1Q96BM0 104 aa12.98□□□□□ -0.33
TSPAN3-207ENST00000559494 CHAC1Q9BUX1 264 aa12.98□□□□□ -0.33
TSPAN3-207ENST00000559494 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
TSPAN3-207ENST00000559494 COA6Q5JTJ3 125 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-207ENST00000559494 SCXQ7RTU7 201 aa12.97□□□□□ -0.33
TSPAN3-207ENST00000559494 LINC00469Q8N7U9 141 aa12.97□□□□□ -0.33
TSPAN3-207ENST00000559494 PCLOQ9Y6V0 5065 aa12.97□□□□□ -0.33
TSPAN3-207ENST00000559494 IGLC3P0DOY3 106 aa12.96□□□□□ -0.33
TSPAN3-207ENST00000559494 CIRBP-AS1Q8TBR5 109 aa12.96□□□□□ -0.33
TSPAN3-207ENST00000559494 F8WDY8 70 aa12.95□□□□□ -0.34
TSPAN3-207ENST00000559494 SMR3BP02814 79 aaPredicted RBP12.95□□□□□ -0.34
TSPAN3-207ENST00000559494 CHTF8P0CG12 524 aa12.95□□□□□ -0.34
TSPAN3-207ENST00000559494 C10orf25Q5T742 122 aa12.95□□□□□ -0.34
TSPAN3-207ENST00000559494 UNQ6190/PRO20217Q6UXQ8 127 aa12.95□□□□□ -0.34
TSPAN3-207ENST00000559494 LEPROTL1O95214 131 aa12.94□□□□□ -0.34
TSPAN3-207ENST00000559494 FABP4P15090 132 aa12.94□□□□□ -0.34
TSPAN3-207ENST00000559494 CIRBPQ14011 172 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-207ENST00000559494 Q8N1X5 172 aa12.94□□□□□ -0.34
TSPAN3-207ENST00000559494 NDUFA1O15239 70 aa12.93□□□□□ -0.34
TSPAN3-207ENST00000559494 PACRGQ96M98 296 aaPredicted RBP12.93□□□□□ -0.34
TSPAN3-207ENST00000559494 SMIM1B2RUZ4 78 aa12.92□□□□□ -0.34
TSPAN3-207ENST00000559494 RNF151Q2KHN1 245 aa12.92□□□□□ -0.34
TSPAN3-207ENST00000559494 C2orf82Q6UX34 121 aa12.92□□□□□ -0.34
TSPAN3-207ENST00000559494 KRTAP4-5Q9BYR2 181 aa12.92□□□□□ -0.34
TSPAN3-207ENST00000559494 MRPL35Q9NZE8 188 aaKnown RBP12.92□□□□□ -0.34
TSPAN3-207ENST00000559494 TOMM7Q9P0U1 55 aa12.92□□□□□ -0.34
TSPAN3-207ENST00000559494 TRAV12-1A0A0B4J245 112 aa12.91□□□□□ -0.34
TSPAN3-207ENST00000559494 CHTOPQ9Y3Y2 248 aaKnown RBP12.91□□□□□ -0.34
TSPAN3-207ENST00000559494 A0A096LNI7 61 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms