RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ISOC2Q96AB3 205 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 MRAP2Q96G30 205 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 BIN3Q9NQY0 253 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 CDC42SE2Q9NRR3 84 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 MED9Q9NWA0 146 aa5.85□□□□□ -1.47
SPG11-212ENST00000558790 TRBV6-5A0A0K0K1A5 114 aa5.84□□□□□ -1.47
SPG11-212ENST00000558790 HMSDA8MTL9 139 aa5.84□□□□□ -1.47
SPG11-212ENST00000558790 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.84□□□□□ -1.47
SPG11-212ENST00000558790 PMCHP20382 165 aa5.84□□□□□ -1.47
SPG11-212ENST00000558790 RPL18AQ02543 176 aaKnown RBP5.84□□□□□ -1.47
SPG11-212ENST00000558790 TEX261Q6UWH6 196 aa5.84□□□□□ -1.47
SPG11-212ENST00000558790 SMIM15Q7Z3B0 74 aa5.84□□□□□ -1.47
SPG11-212ENST00000558790 MRPL52Q86TS9 123 aaKnown RBP5.84□□□□□ -1.47
SPG11-212ENST00000558790 CAMK2N2Q96S95 79 aa5.84□□□□□ -1.47
SPG11-212ENST00000558790 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
SPG11-212ENST00000558790 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
SPG11-212ENST00000558790 C7orf77A4D0Y5 90 aa5.82□□□□□ -1.48
SPG11-212ENST00000558790 COX7A2LO14548 114 aa5.82□□□□□ -1.48
SPG11-212ENST00000558790 IGLV7-43P04211 117 aa5.82□□□□□ -1.48
SPG11-212ENST00000558790 RGS21Q2M5E4 152 aa5.82□□□□□ -1.48
SPG11-212ENST00000558790 RNASE13Q5GAN3 156 aaKnown RBP5.82□□□□□ -1.48
SPG11-212ENST00000558790 DIRC1Q969H9 104 aa5.82□□□□□ -1.48
SPG11-212ENST00000558790 ST20Q9HBF5 79 aa5.82□□□□□ -1.48
SPG11-212ENST00000558790 A0A0U1RQV1 116 aa5.81□□□□□ -1.48
SPG11-212ENST00000558790 H0Y9J4 135 aa5.81□□□□□ -1.48
SPG11-212ENST00000558790 TEX46H3BTG2 121 aa5.81□□□□□ -1.48
SPG11-212ENST00000558790 RPL24P83731 157 aaKnown RBP5.81□□□□□ -1.48
SPG11-212ENST00000558790 SPAG11BQ08648 103 aa5.81□□□□□ -1.48
SPG11-212ENST00000558790 KRTAP11-1Q8IUC1 163 aa5.81□□□□□ -1.48
SPG11-212ENST00000558790 OCC1Q8TAD7 63 aa5.81□□□□□ -1.48
SPG11-212ENST00000558790 OPRPNQ99935 248 aaPredicted RBP5.81□□□□□ -1.48
SPG11-212ENST00000558790 TRBV27A0A0K0K1C4 114 aa5.8□□□□□ -1.48
SPG11-212ENST00000558790 FAM168BA1KXE4 195 aa5.8□□□□□ -1.48
SPG11-212ENST00000558790 C1orf196B1AJZ1 125 aa5.8□□□□□ -1.48
SPG11-212ENST00000558790 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
SPG11-212ENST00000558790 POLR2KP53803 58 aaKnown RBP5.8□□□□□ -1.48
SPG11-212ENST00000558790 SNRPEP62304 92 aaKnown RBP5.8□□□□□ -1.48
SPG11-212ENST00000558790 Q6ZUT4 128 aa5.8□□□□□ -1.48
SPG11-212ENST00000558790 C2orf48Q96LS8 159 aa5.8□□□□□ -1.48
SPG11-212ENST00000558790 TRAV13-1A0A0B4J241 112 aa5.79□□□□□ -1.48
SPG11-212ENST00000558790 PRR4Q16378 134 aa5.79□□□□□ -1.48
SPG11-212ENST00000558790 C5orf38Q86SI9 138 aa5.79□□□□□ -1.48
SPG11-212ENST00000558790 SMIM29Q86T20 159 aa5.79□□□□□ -1.48
SPG11-212ENST00000558790 BATF3Q9NR55 127 aa5.79□□□□□ -1.48
SPG11-212ENST00000558790 UBE2D4Q9Y2X8 147 aa5.79□□□□□ -1.48
SPG11-212ENST00000558790 IGLV1-50A0A075B6I6 118 aa5.78□□□□□ -1.48
SPG11-212ENST00000558790 A0A087WZ39 114 aa5.78□□□□□ -1.48
SPG11-212ENST00000558790 GATCO43716 136 aaKnown RBP5.78□□□□□ -1.48
SPG11-212ENST00000558790 FAM19A5Q7Z5A7 132 aaPredicted RBP5.78□□□□□ -1.48
SPG11-212ENST00000558790 FAM210AQ96ND0 272 aa5.78□□□□□ -1.48
SPG11-212ENST00000558790 CSDC2Q9Y534 153 aaKnown RBP5.78□□□□□ -1.48
SPG11-212ENST00000558790 A8MWL6 223 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 SMKR1H3BMG3 65 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 VPREB1P12018 145 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 RAB4AP20338 218 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 FCER1GP30273 86 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 FAM231DQ6ZW35 169 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 AMN1Q8IY45 258 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 OR10D4PQ8NGN7 298 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 BORCS7Q96B45 105 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 TMEM191AQ9H0A3 160 aa5.77□□□□□ -1.49
SPG11-212ENST00000558790 MRPL35Q9NZE8 188 aaKnown RBP5.77□□□□□ -1.49
SPG11-212ENST00000558790 IGLV5-45A0A087WSX0 123 aa5.76□□□□□ -1.49
SPG11-212ENST00000558790 A0A1B0GUT8 65 aa5.76□□□□□ -1.49
SPG11-212ENST00000558790 HIGD1CA8MV81 97 aa5.76□□□□□ -1.49
SPG11-212ENST00000558790 TAGLN2P37802 199 aaKnown RBP5.76□□□□□ -1.49
SPG11-212ENST00000558790 UBE2D1P51668 147 aa5.76□□□□□ -1.49
SPG11-212ENST00000558790 KRTAP7-1Q8IUC3 87 aa5.76□□□□□ -1.49
SPG11-212ENST00000558790 TSKUQ8WUA8 353 aa5.76□□□□□ -1.49
SPG11-212ENST00000558790 ORAOV1Q8WV07 137 aa5.76□□□□□ -1.49
SPG11-212ENST00000558790 NDUFA1O15239 70 aa5.75□□□□□ -1.49
SPG11-212ENST00000558790 GAGE2EQ4V326 116 aa5.75□□□□□ -1.49
SPG11-212ENST00000558790 GAGE2AQ6NT46 116 aa5.75□□□□□ -1.49
SPG11-212ENST00000558790 C6orf48Q9UBA6 75 aa5.75□□□□□ -1.49
SPG11-212ENST00000558790 GAGE2DQ9UEU5 116 aa5.75□□□□□ -1.49
SPG11-212ENST00000558790 MUC17Q685J3 4493 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 TMEM250H0YL14 139 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 M0QXV9 152 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 TLX1NBP0CAT3 122 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 RPL13AP40429 203 aaKnown RBP5.74□□□□□ -1.49
SPG11-212ENST00000558790 SMAGPQ0VAQ4 97 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 UNQ6190/PRO20217Q6UXQ8 127 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 FAM104AQ969W3 186 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 IMMP2LQ96T52 175 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 KIR2DL4Q99706 377 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 SMDT1Q9H4I9 107 aa5.74□□□□□ -1.49
SPG11-212ENST00000558790 IGHV3OR16-9A0A0B4J2B5 98 aa5.73□□□□□ -1.49
SPG11-212ENST00000558790 CEBPGP53567 150 aa5.73□□□□□ -1.49
SPG11-212ENST00000558790 RPL39P62891 51 aaKnown RBP5.73□□□□□ -1.49
SPG11-212ENST00000558790 UBE2BP63146 152 aa5.73□□□□□ -1.49
SPG11-212ENST00000558790 TIMM21Q9BVV7 248 aa5.73□□□□□ -1.49
SPG11-212ENST00000558790 F8WDY8 70 aa5.72□□□□□ -1.49
SPG11-212ENST00000558790 LINC01551Q86U37 167 aa5.72□□□□□ -1.49
SPG11-212ENST00000558790 PPP1R2P9O14990 202 aa5.71□□□□□ -1.5
SPG11-212ENST00000558790 PPP1R17O96001 155 aa5.71□□□□□ -1.5
SPG11-212ENST00000558790 LINC01547P58512 204 aaPredicted RBP5.71□□□□□ -1.5
SPG11-212ENST00000558790 PNRC1Q12796 327 aaPredicted RBP5.71□□□□□ -1.5
SPG11-212ENST00000558790 SLC51BQ86UW2 128 aa5.71□□□□□ -1.5
SPG11-212ENST00000558790 SMIM7Q9BQ49 75 aa5.71□□□□□ -1.5
SPG11-212ENST00000558790 TSPAN13O95857 204 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms