RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 HERVK_113P63121 156 aa8.93□□□□□ -0.98
SMAD3-207ENST00000558763 TMEM101Q96IK0 257 aa8.93□□□□□ -0.98
SMAD3-207ENST00000558763 GEMIN7Q9H840 131 aaKnown RBP8.93□□□□□ -0.98
SMAD3-207ENST00000558763 IGLV5-39A0A0G2JS06 123 aa8.92□□□□□ -0.98
SMAD3-207ENST00000558763 HTN3P15516 51 aa8.92□□□□□ -0.98
SMAD3-207ENST00000558763 LGALS3P17931 250 aaKnown RBP8.92□□□□□ -0.98
SMAD3-207ENST00000558763 GCSHP23434 173 aa8.92□□□□□ -0.98
SMAD3-207ENST00000558763 Q6ZTC4 211 aa8.92□□□□□ -0.98
SMAD3-207ENST00000558763 COX11Q9Y6N1 276 aa8.92□□□□□ -0.98
SMAD3-207ENST00000558763 A0A1B0GUV1 79 aa8.91□□□□□ -0.98
SMAD3-207ENST00000558763 SMIM1B2RUZ4 78 aa8.91□□□□□ -0.98
SMAD3-207ENST00000558763 SCGB1D4Q6XE38 83 aa8.91□□□□□ -0.98
SMAD3-207ENST00000558763 RBX1P62877 108 aa8.9□□□□□ -0.98
SMAD3-207ENST00000558763 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
SMAD3-207ENST00000558763 MRPL23Q16540 153 aaKnown RBP8.9□□□□□ -0.99
SMAD3-207ENST00000558763 ZFAND6Q6FIF0 208 aa8.9□□□□□ -0.99
SMAD3-207ENST00000558763 Q8N3U1 123 aa8.9□□□□□ -0.99
SMAD3-207ENST00000558763 HIST1H4GQ99525 98 aa8.9□□□□□ -0.99
SMAD3-207ENST00000558763 A6NDN8 102 aa8.89□□□□□ -0.99
SMAD3-207ENST00000558763 H3BRM9 83 aa8.89□□□□□ -0.99
SMAD3-207ENST00000558763 LITAFQ99732 161 aa8.89□□□□□ -0.99
SMAD3-207ENST00000558763 ICOSQ9Y6W8 199 aa8.89□□□□□ -0.99
SMAD3-207ENST00000558763 A0A0J9YXY3 114 aa8.88□□□□□ -0.99
SMAD3-207ENST00000558763 IGHV3OR16-9A0A0B4J2B5 98 aa8.88□□□□□ -0.99
SMAD3-207ENST00000558763 K7ERJ3 54 aa8.88□□□□□ -0.99
SMAD3-207ENST00000558763 IGHV3-30P01768 117 aa8.88□□□□□ -0.99
SMAD3-207ENST00000558763 IGHV3-30-5P0DP03 117 aa8.88□□□□□ -0.99
SMAD3-207ENST00000558763 NDUFA12Q9UI09 145 aa8.88□□□□□ -0.99
SMAD3-207ENST00000558763 A0A1B0GWB2 263 aa8.87□□□□□ -0.99
SMAD3-207ENST00000558763 H3BNG1 76 aa8.87□□□□□ -0.99
SMAD3-207ENST00000558763 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
SMAD3-207ENST00000558763 DNAH7Q8WXX0 4024 aa8.86□□□□□ -0.99
SMAD3-207ENST00000558763 DEFB131BA0A096LNP1 70 aa8.86□□□□□ -0.99
SMAD3-207ENST00000558763 IGKV3OR2-268A0A0C4DH90 116 aa8.86□□□□□ -0.99
SMAD3-207ENST00000558763 LELP1Q5T871 98 aa8.86□□□□□ -0.99
SMAD3-207ENST00000558763 SH2D6Q7Z4S9 175 aa8.86□□□□□ -0.99
SMAD3-207ENST00000558763 NHP2Q9NX24 153 aaKnown RBP8.86□□□□□ -0.99
SMAD3-207ENST00000558763 TMEM262E9PQX1 116 aa8.85□□□□□ -0.99
SMAD3-207ENST00000558763 NDUFA1O15239 70 aa8.85□□□□□ -0.99
SMAD3-207ENST00000558763 CSMD3Q7Z407 3707 aa8.85□□□□□ -0.99
SMAD3-207ENST00000558763 PTTG1IPP53801 180 aa8.84□□□□□ -0.99
SMAD3-207ENST00000558763 LYPD5Q6UWN5 251 aa8.84□□□□□ -0.99
SMAD3-207ENST00000558763 TRAV10A0A0B4J240 114 aa8.84□□□□□ -0.99
SMAD3-207ENST00000558763 C9orf118A6NHY6 69 aa8.84□□□□□ -0.99
SMAD3-207ENST00000558763 SRSF9Q13242 221 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMAD3-207ENST00000558763 ADAMTSL4-AS1Q5T5F5 129 aa8.84□□□□□ -0.99
SMAD3-207ENST00000558763 ZNF625Q96I27 306 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-207ENST00000558763 SMIM13P0DJ93 91 aa8.83□□□□□ -1
SMAD3-207ENST00000558763 CLPSL2Q6UWE3 100 aa8.83□□□□□ -1
SMAD3-207ENST00000558763 RAB37Q96AX2 223 aa8.83□□□□□ -1
SMAD3-207ENST00000558763 A0A087WZ39 114 aa8.82□□□□□ -1
SMAD3-207ENST00000558763 NAA38Q9BRA0 125 aaKnown RBP8.82□□□□□ -1
SMAD3-207ENST00000558763 EIF4EBP3O60516 100 aaPredicted RBP8.82□□□□□ -1
SMAD3-207ENST00000558763 LINC00269Q8N2A0 174 aa8.82□□□□□ -1
SMAD3-207ENST00000558763 TMEM238C9JI98 176 aa8.81□□□□□ -1
SMAD3-207ENST00000558763 Q9H8V8 135 aa8.81□□□□□ -1
SMAD3-207ENST00000558763 H3BUT2 72 aa8.81□□□□□ -1
SMAD3-207ENST00000558763 CCL25O15444 150 aa8.81□□□□□ -1
SMAD3-207ENST00000558763 SPANXDQ9BXN6 97 aa8.81□□□□□ -1
SMAD3-207ENST00000558763 SPANXCQ9NY87 97 aa8.81□□□□□ -1
SMAD3-207ENST00000558763 TIMM17BO60830 172 aa8.8□□□□□ -1
SMAD3-207ENST00000558763 ANGP03950 147 aaKnown RBP8.79□□□□□ -1
SMAD3-207ENST00000558763 XCL1P47992 114 aa8.79□□□□□ -1
SMAD3-207ENST00000558763 REG3AQ06141 175 aa8.79□□□□□ -1
SMAD3-207ENST00000558763 C5orf38Q86SI9 138 aa8.79□□□□□ -1
SMAD3-207ENST00000558763 MUSTN1Q8IVN3 82 aa8.79□□□□□ -1
SMAD3-207ENST00000558763 PRR34Q9NV39 138 aa8.79□□□□□ -1
SMAD3-207ENST00000558763 IGLL5B9A064 214 aa8.79□□□□□ -1
SMAD3-207ENST00000558763 SS18Q15532 418 aa8.79□□□□□ -1
SMAD3-207ENST00000558763 TMEM238LA0A1B0GVL6 79 aa8.78□□□□□ -1
SMAD3-207ENST00000558763 A4D1N5 150 aa8.78□□□□□ -1
SMAD3-207ENST00000558763 A6NJY4 79 aa8.78□□□□□ -1
SMAD3-207ENST00000558763 CFC1BP0CG36 223 aa8.78□□□□□ -1
SMAD3-207ENST00000558763 CFC1P0CG37 223 aa8.78□□□□□ -1
SMAD3-207ENST00000558763 UBE2V1Q13404 147 aa8.78□□□□□ -1
SMAD3-207ENST00000558763 MIAQ16674 131 aa8.78□□□□□ -1
SMAD3-207ENST00000558763 WFDC10BQ8IUB3 73 aa8.78□□□□□ -1
SMAD3-207ENST00000558763 COX7B2Q8TF08 81 aa8.78□□□□□ -1
SMAD3-207ENST00000558763 A0A1W2PPM0 123 aa8.77□□□□□ -1
SMAD3-207ENST00000558763 VAMP3Q15836 100 aa8.77□□□□□ -1
SMAD3-207ENST00000558763 ESRGQ1W209 222 aa8.77□□□□□ -1
SMAD3-207ENST00000558763 DYNC2H1Q8NCM8 4307 aaKnown RBP8.77□□□□□ -1.01
SMAD3-207ENST00000558763 TENM2Q9NT68 2774 aa8.77□□□□□ -1.01
SMAD3-207ENST00000558763 CHCHD10Q8WYQ3 142 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-207ENST00000558763 WWC2-AS2Q96NR7 200 aa8.77□□□□□ -1.01
SMAD3-207ENST00000558763 DNAH1Q9P2D7 4330 aa8.77□□□□□ -1.01
SMAD3-207ENST00000558763 STARD9Q9P2P6 4700 aa8.76□□□□□ -1.01
SMAD3-207ENST00000558763 CD164L2Q6UWJ8 174 aa8.76□□□□□ -1.01
SMAD3-207ENST00000558763 ENHOQ6UWT2 76 aa8.76□□□□□ -1.01
SMAD3-207ENST00000558763 LINC01561Q8N1V8 128 aa8.76□□□□□ -1.01
SMAD3-207ENST00000558763 DAND5Q8N907 189 aa8.76□□□□□ -1.01
SMAD3-207ENST00000558763 IGLV10-54A0A075B6I4 117 aa8.75□□□□□ -1.01
SMAD3-207ENST00000558763 NUPR2A6NF83 97 aa8.75□□□□□ -1.01
SMAD3-207ENST00000558763 APOMO95445 188 aa8.75□□□□□ -1.01
SMAD3-207ENST00000558763 LYSTQ99698 3801 aa8.75□□□□□ -1.01
SMAD3-207ENST00000558763 HERV-K104P63124 156 aa8.75□□□□□ -1.01
SMAD3-207ENST00000558763 FOXI1Q12951 378 aa8.75□□□□□ -1.01
SMAD3-207ENST00000558763 MUC7Q8TAX7 377 aa8.75□□□□□ -1.01
SMAD3-207ENST00000558763 KLK12Q9UKR0 248 aa8.75□□□□□ -1.01
SMAD3-207ENST00000558763 RPL24P83731 157 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms