RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 MALP21145 153 aa8.87□□□□□ -0.99
TSPAN3-205ENST00000558745 COX6A2Q02221 97 aa8.87□□□□□ -0.99
TSPAN3-205ENST00000558745 CBLN2Q8IUK8 224 aa8.87□□□□□ -0.99
TSPAN3-205ENST00000558745 CIRBP-AS1Q8TBR5 109 aa8.87□□□□□ -0.99
TSPAN3-205ENST00000558745 TMEM141Q96I45 108 aa8.87□□□□□ -0.99
TSPAN3-205ENST00000558745 CHAC1Q9BUX1 264 aa8.87□□□□□ -0.99
TSPAN3-205ENST00000558745 VPS13BQ7Z7G8 4022 aa8.87□□□□□ -0.99
TSPAN3-205ENST00000558745 CHTF8P0CG12 524 aa8.86□□□□□ -0.99
TSPAN3-205ENST00000558745 Q5VSD8 79 aa8.86□□□□□ -0.99
TSPAN3-205ENST00000558745 IGLV4-69A0A075B6H9 119 aa8.85□□□□□ -0.99
TSPAN3-205ENST00000558745 IGHV3-64A0A075B6Q5 118 aa8.85□□□□□ -0.99
TSPAN3-205ENST00000558745 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.85□□□□□ -0.99
TSPAN3-205ENST00000558745 K7EMI3 77 aa8.85□□□□□ -0.99
TSPAN3-205ENST00000558745 LINC00173Q6ZV60 143 aa8.85□□□□□ -0.99
TSPAN3-205ENST00000558745 URB1-AS1Q96HZ7 61 aa8.85□□□□□ -0.99
TSPAN3-205ENST00000558745 IGHV3OR16-9A0A0B4J2B5 98 aa8.84□□□□□ -0.99
TSPAN3-205ENST00000558745 ZNF561-AS1K7EIQ3 104 aa8.84□□□□□ -0.99
TSPAN3-205ENST00000558745 LINC00242Q5T6M2 205 aa8.84□□□□□ -0.99
TSPAN3-205ENST00000558745 TEX43Q6ZNM6 134 aa8.84□□□□□ -0.99
TSPAN3-205ENST00000558745 TOMM6Q96B49 74 aa8.84□□□□□ -0.99
TSPAN3-205ENST00000558745 VCX2Q9H322 139 aa8.84□□□□□ -0.99
TSPAN3-205ENST00000558745 LINC01546A6NGU7 62 aa8.83□□□□□ -1
TSPAN3-205ENST00000558745 UBE2D1P51668 147 aa8.83□□□□□ -1
TSPAN3-205ENST00000558745 FA2HQ7L5A8 372 aa8.83□□□□□ -1
TSPAN3-205ENST00000558745 C18orf32Q8TCD1 76 aa8.83□□□□□ -1
TSPAN3-205ENST00000558745 AMELXQ99217 191 aa8.83□□□□□ -1
TSPAN3-205ENST00000558745 Q6ZRU5 148 aa8.82□□□□□ -1
TSPAN3-205ENST00000558745 LINC00528Q8N1L1 170 aa8.82□□□□□ -1
TSPAN3-205ENST00000558745 DPH3Q96FX2 82 aa8.82□□□□□ -1
TSPAN3-205ENST00000558745 SCGB3A1Q96QR1 104 aa8.82□□□□□ -1
TSPAN3-205ENST00000558745 SYCNQ0VAF6 134 aa8.81□□□□□ -1
TSPAN3-205ENST00000558745 Q6ZN92 141 aa8.81□□□□□ -1
TSPAN3-205ENST00000558745 SMCO4Q9NRQ5 59 aa8.81□□□□□ -1
TSPAN3-205ENST00000558745 IGKV2-24A0A0C4DH68 120 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 A0A0J9YXV3 536 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 FAM229AH3BQW9 127 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 SPAG11BQ08648 103 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 PMCHL1Q16048 86 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 ERASQ7Z444 233 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 ORAOV1Q8WV07 137 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 CARD19Q96LW7 228 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 TIMM17AQ99595 171 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 C2orf88Q9BSF0 95 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 A0A096LNJ9 63 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 APOMO95445 188 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 LINC00614P0C842 121 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 G0S2P27469 103 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 CAMK2N2Q96S95 79 aa8.8□□□□□ -1
TSPAN3-205ENST00000558745 A0A087WYN8 130 aa8.79□□□□□ -1
TSPAN3-205ENST00000558745 A0A087WZ39 114 aa8.79□□□□□ -1
TSPAN3-205ENST00000558745 A0A096LNI7 61 aa8.79□□□□□ -1
TSPAN3-205ENST00000558745 CIRBPQ14011 172 aaKnown RBP8.79□□□□□ -1
TSPAN3-205ENST00000558745 NPSP0C0P6 89 aa8.78□□□□□ -1
TSPAN3-205ENST00000558745 INAFM2P0DMQ5 153 aa8.78□□□□□ -1
TSPAN3-205ENST00000558745 MAJINQ3KP22 176 aa8.78□□□□□ -1
TSPAN3-205ENST00000558745 C10orf25Q5T742 122 aa8.78□□□□□ -1
TSPAN3-205ENST00000558745 SPACA4Q8TDM5 124 aa8.78□□□□□ -1
TSPAN3-205ENST00000558745 SCO1O75880 301 aa8.77□□□□□ -1.01
TSPAN3-205ENST00000558745 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
TSPAN3-205ENST00000558745 UNQ6190/PRO20217Q6UXQ8 127 aa8.77□□□□□ -1.01
TSPAN3-205ENST00000558745 OR10D4PQ8NGN7 298 aa8.77□□□□□ -1.01
TSPAN3-205ENST00000558745 C2orf48Q96LS8 159 aa8.77□□□□□ -1.01
TSPAN3-205ENST00000558745 TRGC2P03986 189 aa8.76□□□□□ -1.01
TSPAN3-205ENST00000558745 GAGE2BQ13066 116 aa8.76□□□□□ -1.01
TSPAN3-205ENST00000558745 FAM19A3Q7Z5A8 133 aa8.76□□□□□ -1.01
TSPAN3-205ENST00000558745 CST9LQ9H4G1 147 aa8.76□□□□□ -1.01
TSPAN3-205ENST00000558745 CDKN2A-AS1Q9UH64 79 aa8.76□□□□□ -1.01
TSPAN3-205ENST00000558745 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
TSPAN3-205ENST00000558745 COLCA2A8K830 154 aa8.75□□□□□ -1.01
TSPAN3-205ENST00000558745 PAPPA-AS1Q5QFB9 102 aa8.75□□□□□ -1.01
TSPAN3-205ENST00000558745 C2orf82Q6UX34 121 aa8.75□□□□□ -1.01
TSPAN3-205ENST00000558745 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
TSPAN3-205ENST00000558745 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.74□□□□□ -1.01
TSPAN3-205ENST00000558745 NDUFA6P56556 154 aa8.74□□□□□ -1.01
TSPAN3-205ENST00000558745 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
TSPAN3-205ENST00000558745 STPG4Q8N801 248 aa8.74□□□□□ -1.01
TSPAN3-205ENST00000558745 GEMIN7Q9H840 131 aaKnown RBP8.74□□□□□ -1.01
TSPAN3-205ENST00000558745 TOMM7Q9P0U1 55 aa8.74□□□□□ -1.01
TSPAN3-205ENST00000558745 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
TSPAN3-205ENST00000558745 LOC107984640A0A0U1RRK4 108 aa8.73□□□□□ -1.01
TSPAN3-205ENST00000558745 HBDP02042 147 aa8.73□□□□□ -1.01
TSPAN3-205ENST00000558745 RAB5BP61020 215 aa8.73□□□□□ -1.01
TSPAN3-205ENST00000558745 HERVK_113P63121 156 aa8.73□□□□□ -1.01
TSPAN3-205ENST00000558745 PMVKQ15126 192 aa8.73□□□□□ -1.01
TSPAN3-205ENST00000558745 PDZD11Q5EBL8 140 aa8.73□□□□□ -1.01
TSPAN3-205ENST00000558745 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
TSPAN3-205ENST00000558745 C6orf48Q9UBA6 75 aa8.73□□□□□ -1.01
TSPAN3-205ENST00000558745 NDUFA1O15239 70 aa8.72□□□□□ -1.01
TSPAN3-205ENST00000558745 PLA2G1BP04054 148 aaKnown RBP8.72□□□□□ -1.01
TSPAN3-205ENST00000558745 PTTG1IPP53801 180 aa8.72□□□□□ -1.01
TSPAN3-205ENST00000558745 LINC00469Q8N7U9 141 aa8.72□□□□□ -1.01
TSPAN3-205ENST00000558745 MRPL35Q9NZE8 188 aaKnown RBP8.72□□□□□ -1.01
TSPAN3-205ENST00000558745 TINCRA0A1B0GVN0 87 aa8.71□□□□□ -1.02
TSPAN3-205ENST00000558745 LINC01549A6NIU2 74 aa8.71□□□□□ -1.02
TSPAN3-205ENST00000558745 RPL18AQ02543 176 aaKnown RBP8.71□□□□□ -1.02
TSPAN3-205ENST00000558745 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.02
TSPAN3-205ENST00000558745 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.02
TSPAN3-205ENST00000558745 A0A1W2PNN7 141 aa8.7□□□□□ -1.02
TSPAN3-205ENST00000558745 RPL37AP61513 92 aaKnown RBP8.7□□□□□ -1.02
TSPAN3-205ENST00000558745 SEC11AP67812 179 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms