RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 NPYP01303 97 aa7.11□□□□□ -1.27
CASC4-205ENST00000558735 MRPL54Q6P161 138 aaKnown RBP7.11□□□□□ -1.27
CASC4-205ENST00000558735 SMIM2Q9BVW6 85 aa7.11□□□□□ -1.27
CASC4-205ENST00000558735 TCAPO15273 167 aa7.1□□□□□ -1.27
CASC4-205ENST00000558735 RNF151Q2KHN1 245 aa7.1□□□□□ -1.27
CASC4-205ENST00000558735 C9orf116Q5BN46 136 aaPredicted RBP7.1□□□□□ -1.27
CASC4-205ENST00000558735 F8W036 122 aa7.09□□□□□ -1.27
CASC4-205ENST00000558735 HBBP68871 147 aa7.09□□□□□ -1.27
CASC4-205ENST00000558735 MRPS36P82909 103 aaKnown RBP7.09□□□□□ -1.27
CASC4-205ENST00000558735 PPBPP02775 128 aa7.08□□□□□ -1.28
CASC4-205ENST00000558735 S100A8P05109 93 aa7.08□□□□□ -1.28
CASC4-205ENST00000558735 SPAG11BQ08648 103 aa7.08□□□□□ -1.28
CASC4-205ENST00000558735 C10orf25Q5T742 122 aa7.08□□□□□ -1.28
CASC4-205ENST00000558735 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
CASC4-205ENST00000558735 OR10D4PQ8NGN7 298 aa7.08□□□□□ -1.28
CASC4-205ENST00000558735 SPANXA1Q9NS26 97 aa7.08□□□□□ -1.28
CASC4-205ENST00000558735 PSORS1C2Q9UIG4 136 aa7.08□□□□□ -1.28
CASC4-205ENST00000558735 RPL18AQ02543 176 aaKnown RBP7.07□□□□□ -1.28
CASC4-205ENST00000558735 TMEM136Q6ZRR5 245 aa7.07□□□□□ -1.28
CASC4-205ENST00000558735 PHF5AQ7RTV0 110 aaKnown RBP7.07□□□□□ -1.28
CASC4-205ENST00000558735 ORAOV1Q8WV07 137 aa7.07□□□□□ -1.28
CASC4-205ENST00000558735 MRPL35Q9NZE8 188 aaKnown RBP7.07□□□□□ -1.28
CASC4-205ENST00000558735 F8WDY8 70 aa7.06□□□□□ -1.28
CASC4-205ENST00000558735 UNQ6190/PRO20217Q6UXQ8 127 aa7.06□□□□□ -1.28
CASC4-205ENST00000558735 PRELID3AQ96N28 172 aa7.06□□□□□ -1.28
CASC4-205ENST00000558735 IFITM10A6NMD0 228 aa7.05□□□□□ -1.28
CASC4-205ENST00000558735 PRSS47A8MTI9 375 aa7.05□□□□□ -1.28
CASC4-205ENST00000558735 RAB5AP20339 215 aa7.05□□□□□ -1.28
CASC4-205ENST00000558735 KIAA0087Q14695 138 aa7.05□□□□□ -1.28
CASC4-205ENST00000558735 ATP5L2Q7Z4Y8 100 aa7.05□□□□□ -1.28
CASC4-205ENST00000558735 ORMDL3Q8N138 153 aa7.05□□□□□ -1.28
CASC4-205ENST00000558735 IMMP2LQ96T52 175 aa7.05□□□□□ -1.28
CASC4-205ENST00000558735 PYGO1Q9Y3Y4 419 aa7.05□□□□□ -1.28
CASC4-205ENST00000558735 NDUFA1O15239 70 aa7.04□□□□□ -1.28
CASC4-205ENST00000558735 MT-ND6P03923 174 aa7.04□□□□□ -1.28
CASC4-205ENST00000558735 TLX1NBP0CAT3 122 aa7.04□□□□□ -1.28
CASC4-205ENST00000558735 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
CASC4-205ENST00000558735 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
CASC4-205ENST00000558735 C6orf48Q9UBA6 75 aa7.04□□□□□ -1.28
CASC4-205ENST00000558735 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
CASC4-205ENST00000558735 A0A087WZ39 114 aa7.03□□□□□ -1.28
CASC4-205ENST00000558735 LOC389332A0A1B0GUA5 103 aa7.03□□□□□ -1.28
CASC4-205ENST00000558735 FAM168BA1KXE4 195 aa7.03□□□□□ -1.28
CASC4-205ENST00000558735 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
CASC4-205ENST00000558735 C1orf137Q5JT78 98 aa7.03□□□□□ -1.28
CASC4-205ENST00000558735 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
CASC4-205ENST00000558735 LPAP08519 4548 aa7.03□□□□□ -1.28
CASC4-205ENST00000558735 MUC2Q02817 5179 aa7.02□□□□□ -1.29
CASC4-205ENST00000558735 ZC2HC1BQ5TFG8 222 aa7.02□□□□□ -1.29
CASC4-205ENST00000558735 TGIF2-C20orf24A0A0A6YYL0 155 aa7.01□□□□□ -1.29
CASC4-205ENST00000558735 UBE2D1P51668 147 aa7.01□□□□□ -1.29
CASC4-205ENST00000558735 GAGE2EQ4V326 116 aa7.01□□□□□ -1.29
CASC4-205ENST00000558735 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
CASC4-205ENST00000558735 TMEM141Q96I45 108 aa7.01□□□□□ -1.29
CASC4-205ENST00000558735 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
CASC4-205ENST00000558735 GAGE2DQ9UEU5 116 aa7.01□□□□□ -1.29
CASC4-205ENST00000558735 IGLV7-43P04211 117 aa7□□□□□ -1.29
CASC4-205ENST00000558735 LINC00173Q6ZV60 143 aa7□□□□□ -1.29
CASC4-205ENST00000558735 Q8N8P6 123 aa7□□□□□ -1.29
CASC4-205ENST00000558735 ANAPC16Q96DE5 110 aa7□□□□□ -1.29
CASC4-205ENST00000558735 MAP1LC3AQ9H492 121 aa7□□□□□ -1.29
CASC4-205ENST00000558735 LAMTOR2Q9Y2Q5 125 aa7□□□□□ -1.29
CASC4-205ENST00000558735 MT-ND4LP03901 98 aa6.99□□□□□ -1.29
CASC4-205ENST00000558735 PNRC1Q12796 327 aaPredicted RBP6.99□□□□□ -1.29
CASC4-205ENST00000558735 C2orf66Q6UXQ4 117 aa6.99□□□□□ -1.29
CASC4-205ENST00000558735 TEX43Q6ZNM6 134 aa6.99□□□□□ -1.29
CASC4-205ENST00000558735 LINC01561Q8N1V8 128 aa6.99□□□□□ -1.29
CASC4-205ENST00000558735 AMELXQ99217 191 aa6.99□□□□□ -1.29
CASC4-205ENST00000558735 TRBV30A0A0K0K1B3 111 aa6.98□□□□□ -1.29
CASC4-205ENST00000558735 IGIPA6NJ69 53 aa6.98□□□□□ -1.29
CASC4-205ENST00000558735 FAM19A5Q7Z5A7 132 aaPredicted RBP6.98□□□□□ -1.29
CASC4-205ENST00000558735 VCX2Q9H322 139 aa6.98□□□□□ -1.29
CASC4-205ENST00000558735 CYSLTR1Q9Y271 337 aa6.98□□□□□ -1.29
CASC4-205ENST00000558735 NDUFC2-KCTD14E9PQ53 114 aa6.97□□□□□ -1.29
CASC4-205ENST00000558735 C9orf129Q5T035 196 aaKnown RBP6.97□□□□□ -1.29
CASC4-205ENST00000558735 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
CASC4-205ENST00000558735 DIRC1Q969H9 104 aa6.97□□□□□ -1.29
CASC4-205ENST00000558735 FAT4Q6V0I7 4981 aa6.97□□□□□ -1.29
CASC4-205ENST00000558735 Q6ZN92 141 aa6.96□□□□□ -1.3
CASC4-205ENST00000558735 FAM19A3Q7Z5A8 133 aa6.96□□□□□ -1.3
CASC4-205ENST00000558735 PACRGQ96M98 296 aaPredicted RBP6.96□□□□□ -1.3
CASC4-205ENST00000558735 C2orf88Q9BSF0 95 aa6.96□□□□□ -1.3
CASC4-205ENST00000558735 H0Y9J4 135 aa6.95□□□□□ -1.3
CASC4-205ENST00000558735 K7EMI3 77 aa6.95□□□□□ -1.3
CASC4-205ENST00000558735 NPSP0C0P6 89 aa6.95□□□□□ -1.3
CASC4-205ENST00000558735 ORMDL2Q53FV1 153 aa6.95□□□□□ -1.3
CASC4-205ENST00000558735 M0QXV9 152 aa6.94□□□□□ -1.3
CASC4-205ENST00000558735 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
CASC4-205ENST00000558735 RAB14P61106 215 aa6.94□□□□□ -1.3
CASC4-205ENST00000558735 C6orf226Q5I0X4 101 aa6.94□□□□□ -1.3
CASC4-205ENST00000558735 CTDSP1Q9GZU7 261 aa6.94□□□□□ -1.3
CASC4-205ENST00000558735 NXT2Q9NPJ8 142 aaKnown RBP6.94□□□□□ -1.3
CASC4-205ENST00000558735 TOMM7Q9P0U1 55 aa6.94□□□□□ -1.3
CASC4-205ENST00000558735 KIAA1644Q3SXP7 199 aa6.93□□□□□ -1.3
CASC4-205ENST00000558735 ALKBH7Q9BT30 221 aaPredicted RBP6.93□□□□□ -1.3
CASC4-205ENST00000558735 CDKN2A-AS1Q9UH64 79 aa6.93□□□□□ -1.3
CASC4-205ENST00000558735 PRSS2P07478 247 aa6.92□□□□□ -1.3
CASC4-205ENST00000558735 CKS1BP61024 79 aa6.92□□□□□ -1.3
CASC4-205ENST00000558735 UBE2BP63146 152 aa6.92□□□□□ -1.3
CASC4-205ENST00000558735 Q8IZM0 81 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms