RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 BRD3OSQ6XYD6 125 aa7.96□□□□□ -1.13
PCAT29-201ENST00000558411 RPL36ALQ969Q0 106 aaKnown RBP7.96□□□□□ -1.13
PCAT29-201ENST00000558411 Q96MF0 132 aa7.96□□□□□ -1.13
PCAT29-201ENST00000558411 TRAV23DV6A0A075B6W5 121 aa7.96□□□□□ -1.14
PCAT29-201ENST00000558411 IBA57-AS1B1ANH7 110 aa7.96□□□□□ -1.14
PCAT29-201ENST00000558411 CCL18P55774 89 aa7.96□□□□□ -1.14
PCAT29-201ENST00000558411 C20orf197Q8N268 126 aa7.96□□□□□ -1.14
PCAT29-201ENST00000558411 USP24Q9UPU5 2620 aa7.95□□□□□ -1.14
PCAT29-201ENST00000558411 TRBV10-1A0A0K0K1A3 114 aa7.95□□□□□ -1.14
PCAT29-201ENST00000558411 TRAV7A0A075B6U4 112 aa7.94□□□□□ -1.14
PCAT29-201ENST00000558411 H7BZZ5 65 aa7.94□□□□□ -1.14
PCAT29-201ENST00000558411 LINC00158P58513 81 aa7.94□□□□□ -1.14
PCAT29-201ENST00000558411 CDSNQ15517 529 aa7.94□□□□□ -1.14
PCAT29-201ENST00000558411 ADORA2A-AS1P86434 159 aa7.93□□□□□ -1.14
PCAT29-201ENST00000558411 KLKP1Q107X0 134 aa7.93□□□□□ -1.14
PCAT29-201ENST00000558411 ENHOQ6UWT2 76 aa7.93□□□□□ -1.14
PCAT29-201ENST00000558411 NTM-AS1Q6ZSK4 140 aa7.93□□□□□ -1.14
PCAT29-201ENST00000558411 UBL5Q9BZL1 73 aa7.93□□□□□ -1.14
PCAT29-201ENST00000558411 TRBV6-4A0A1B0GX49 114 aa7.93□□□□□ -1.14
PCAT29-201ENST00000558411 TMEM256-PLSCR3K7ERE1 68 aa7.93□□□□□ -1.14
PCAT29-201ENST00000558411 FAM19A1Q7Z5A9 133 aa7.93□□□□□ -1.14
PCAT29-201ENST00000558411 SMIM26A0A096LP01 95 aa7.92□□□□□ -1.14
PCAT29-201ENST00000558411 K7EQD1 137 aa7.92□□□□□ -1.14
PCAT29-201ENST00000558411 SLPIP03973 132 aa7.92□□□□□ -1.14
PCAT29-201ENST00000558411 LINC00336Q6ZUF6 198 aa7.92□□□□□ -1.14
PCAT29-201ENST00000558411 A0A1W2PPR1 153 aa7.91□□□□□ -1.14
PCAT29-201ENST00000558411 PRM2P04554 102 aa7.91□□□□□ -1.14
PCAT29-201ENST00000558411 DEFB131AP59861 70 aa7.91□□□□□ -1.14
PCAT29-201ENST00000558411 LRBAP50851 2863 aa7.91□□□□□ -1.14
PCAT29-201ENST00000558411 IGSF10Q6WRI0 2623 aa7.91□□□□□ -1.14
PCAT29-201ENST00000558411 IGHV4-38-2P0DP08 117 aa7.91□□□□□ -1.14
PCAT29-201ENST00000558411 EPG5Q9HCE0 2579 aa7.91□□□□□ -1.14
PCAT29-201ENST00000558411 SPTA1P02549 2419 aa7.9□□□□□ -1.14
PCAT29-201ENST00000558411 PAX4O43316 350 aa7.9□□□□□ -1.14
PCAT29-201ENST00000558411 INSP01308 110 aa7.9□□□□□ -1.14
PCAT29-201ENST00000558411 WFDC9Q8NEX5 89 aa7.9□□□□□ -1.14
PCAT29-201ENST00000558411 CFAP46Q8IYW2 2715 aa7.9□□□□□ -1.14
PCAT29-201ENST00000558411 UBE2L6O14933 153 aa7.9□□□□□ -1.15
PCAT29-201ENST00000558411 ZFYVE26Q68DK2 2539 aa7.9□□□□□ -1.15
PCAT29-201ENST00000558411 J3QLI3 93 aa7.89□□□□□ -1.15
PCAT29-201ENST00000558411 Q8N814 137 aa7.89□□□□□ -1.15
PCAT29-201ENST00000558411 IL17DQ8TAD2 202 aa7.89□□□□□ -1.15
PCAT29-201ENST00000558411 C16orf95Q9H693 158 aa7.89□□□□□ -1.15
PCAT29-201ENST00000558411 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
PCAT29-201ENST00000558411 F8WDY8 70 aa7.88□□□□□ -1.15
PCAT29-201ENST00000558411 ATP5EP56381 51 aaPredicted RBP7.88□□□□□ -1.15
PCAT29-201ENST00000558411 HRNRQ86YZ3 2850 aaPredicted RBP7.88□□□□□ -1.15
PCAT29-201ENST00000558411 A0A1W2PRX2 142 aa7.88□□□□□ -1.15
PCAT29-201ENST00000558411 NDUFC1O43677 76 aa7.88□□□□□ -1.15
PCAT29-201ENST00000558411 NBASA2RRP1 2371 aa7.87□□□□□ -1.15
PCAT29-201ENST00000558411 LINC00482Q8N8I6 264 aa7.87□□□□□ -1.15
PCAT29-201ENST00000558411 SPTBN1Q01082 2364 aaKnown RBP7.87□□□□□ -1.15
PCAT29-201ENST00000558411 COL12A1Q99715 3063 aa7.87□□□□□ -1.15
PCAT29-201ENST00000558411 A0A087WZ39 114 aa7.86□□□□□ -1.15
PCAT29-201ENST00000558411 IGHV3OR16-9A0A0B4J2B5 98 aa7.86□□□□□ -1.15
PCAT29-201ENST00000558411 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
PCAT29-201ENST00000558411 C1orf43Q9BWL3 253 aa7.86□□□□□ -1.15
PCAT29-201ENST00000558411 LOC110117498A0A087WWA1 95 aa7.85□□□□□ -1.15
PCAT29-201ENST00000558411 TMEM86BQ8N661 226 aa7.85□□□□□ -1.15
PCAT29-201ENST00000558411 COL6A6A6NMZ7 2263 aa7.85□□□□□ -1.15
PCAT29-201ENST00000558411 C10orf99Q6UWK7 81 aa7.85□□□□□ -1.15
PCAT29-201ENST00000558411 ABCA2Q9BZC7 2435 aa7.84□□□□□ -1.15
PCAT29-201ENST00000558411 TRGV1A0A0A0MS02 117 aa7.84□□□□□ -1.15
PCAT29-201ENST00000558411 C11orf44Q8N8P7 122 aa7.84□□□□□ -1.15
PCAT29-201ENST00000558411 UBE2E2Q96LR5 201 aa7.84□□□□□ -1.15
PCAT29-201ENST00000558411 MAP6D1Q9H9H5 199 aa7.84□□□□□ -1.15
PCAT29-201ENST00000558411 NANOS2P60321 138 aaKnown RBP7.84□□□□□ -1.16
PCAT29-201ENST00000558411 Q6ZQT0 140 aa7.84□□□□□ -1.16
PCAT29-201ENST00000558411 CXCL6P80162 114 aa7.83□□□□□ -1.16
PCAT29-201ENST00000558411 A0A096LNT2 108 aa7.82□□□□□ -1.16
PCAT29-201ENST00000558411 IGHV4-61A0A0C4DH41 118 aa7.82□□□□□ -1.16
PCAT29-201ENST00000558411 F8WEM9 126 aa7.82□□□□□ -1.16
PCAT29-201ENST00000558411 LINC01547P58512 204 aaPredicted RBP7.82□□□□□ -1.16
PCAT29-201ENST00000558411 RPL35AP18077 110 aaKnown RBP7.82□□□□□ -1.16
PCAT29-201ENST00000558411 RBM3P98179 157 aaKnown RBP7.82□□□□□ -1.16
PCAT29-201ENST00000558411 ZNF561-AS1K7EIQ3 104 aa7.81□□□□□ -1.16
PCAT29-201ENST00000558411 RMI2Q96E14 147 aa7.81□□□□□ -1.16
PCAT29-201ENST00000558411 TRBV7-6A0A0J9YX20 115 aa7.81□□□□□ -1.16
PCAT29-201ENST00000558411 PDE6GP18545 87 aa7.81□□□□□ -1.16
PCAT29-201ENST00000558411 C6orf223Q8N319 242 aa7.81□□□□□ -1.16
PCAT29-201ENST00000558411 SORL1Q92673 2214 aa7.8□□□□□ -1.16
PCAT29-201ENST00000558411 C6orf226Q5I0X4 101 aa7.8□□□□□ -1.16
PCAT29-201ENST00000558411 Q6ZTI0 123 aa7.8□□□□□ -1.16
PCAT29-201ENST00000558411 TRAV10A0A0B4J240 114 aa7.79□□□□□ -1.16
PCAT29-201ENST00000558411 H3BQ85 93 aa7.79□□□□□ -1.16
PCAT29-201ENST00000558411 Q6ZVQ6 151 aa7.79□□□□□ -1.16
PCAT29-201ENST00000558411 C1orf158Q8N1D5 194 aa7.79□□□□□ -1.16
PCAT29-201ENST00000558411 SNURFQ9Y675 71 aa7.79□□□□□ -1.16
PCAT29-201ENST00000558411 CHD6Q8TD26 2715 aa7.79□□□□□ -1.16
PCAT29-201ENST00000558411 MSMBP08118 114 aa7.79□□□□□ -1.16
PCAT29-201ENST00000558411 Q8IZM0 81 aa7.79□□□□□ -1.16
PCAT29-201ENST00000558411 AVPP01185 164 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 C9orf66Q5T8R8 295 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 SVEP1Q4LDE5 3571 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 KMT2BQ9UMN6 2715 aaPredicted RBP7.78□□□□□ -1.16
PCAT29-201ENST00000558411 IGLV4-60A0A075B6I1 120 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 TRBV7-4A0A0J9YYF1 115 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 IGHV4-59P01825 116 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 SLURP1P55000 103 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms