RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 KRTAP7-1Q8IUC3 87 aa10.5□□□□□ -0.73
TSPAN3-204ENST00000558394 TIMM21Q9BVV7 248 aa10.5□□□□□ -0.73
TSPAN3-204ENST00000558394 NUPR1O60356 82 aa10.49□□□□□ -0.73
TSPAN3-204ENST00000558394 CRYGAP11844 174 aa10.49□□□□□ -0.73
TSPAN3-204ENST00000558394 IGHV3OR16-9A0A0B4J2B5 98 aa10.48□□□□□ -0.73
TSPAN3-204ENST00000558394 A0A1B0GUT8 65 aa10.48□□□□□ -0.73
TSPAN3-204ENST00000558394 TMEM250H0YL14 139 aa10.48□□□□□ -0.73
TSPAN3-204ENST00000558394 SUMO2P61956 95 aaKnown RBP10.48□□□□□ -0.73
TSPAN3-204ENST00000558394 AMN1Q8IY45 258 aa10.48□□□□□ -0.73
TSPAN3-204ENST00000558394 FAM231DQ6ZW35 169 aa10.47□□□□□ -0.73
TSPAN3-204ENST00000558394 PACRGQ96M98 296 aaPredicted RBP10.47□□□□□ -0.73
TSPAN3-204ENST00000558394 A0A087X002 238 aa10.46□□□□□ -0.73
TSPAN3-204ENST00000558394 TRBV30A0A0K0K1B3 111 aa10.46□□□□□ -0.73
TSPAN3-204ENST00000558394 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.73
TSPAN3-204ENST00000558394 SMKR1H3BMG3 65 aa10.46□□□□□ -0.73
TSPAN3-204ENST00000558394 PPP1R2P9O14990 202 aa10.46□□□□□ -0.73
TSPAN3-204ENST00000558394 ALKAL2Q6UX46 152 aa10.46□□□□□ -0.73
TSPAN3-204ENST00000558394 RETNLBQ9BQ08 111 aa10.46□□□□□ -0.73
TSPAN3-204ENST00000558394 TGIF2-C20orf24A0A0A6YYL0 155 aa10.45□□□□□ -0.74
TSPAN3-204ENST00000558394 RPL28P46779 137 aaKnown RBP10.45□□□□□ -0.74
TSPAN3-204ENST00000558394 CEBPGP53567 150 aa10.45□□□□□ -0.74
TSPAN3-204ENST00000558394 BLOC1S1P78537 153 aa10.45□□□□□ -0.74
TSPAN3-204ENST00000558394 CT83Q5H943 113 aa10.45□□□□□ -0.74
TSPAN3-204ENST00000558394 CTDSP1Q9GZU7 261 aa10.45□□□□□ -0.74
TSPAN3-204ENST00000558394 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
TSPAN3-204ENST00000558394 HIGD1CA8MV81 97 aa10.44□□□□□ -0.74
TSPAN3-204ENST00000558394 HBBP68871 147 aa10.44□□□□□ -0.74
TSPAN3-204ENST00000558394 LBHQ53QV2 105 aaPredicted RBP10.44□□□□□ -0.74
TSPAN3-204ENST00000558394 C9orf129Q5T035 196 aaKnown RBP10.44□□□□□ -0.74
TSPAN3-204ENST00000558394 AKAP14Q86UN6 197 aa10.44□□□□□ -0.74
TSPAN3-204ENST00000558394 TPRXLQ17RH7 258 aa10.43□□□□□ -0.74
TSPAN3-204ENST00000558394 TCAPO15273 167 aa10.42□□□□□ -0.74
TSPAN3-204ENST00000558394 RPL39P62891 51 aaKnown RBP10.42□□□□□ -0.74
TSPAN3-204ENST00000558394 NRACQ8N912 160 aa10.42□□□□□ -0.74
TSPAN3-204ENST00000558394 SPANXA1Q9NS26 97 aa10.42□□□□□ -0.74
TSPAN3-204ENST00000558394 IGLV7-46A0A075B6I9 117 aa10.41□□□□□ -0.74
TSPAN3-204ENST00000558394 RIGQ13278 110 aa10.41□□□□□ -0.74
TSPAN3-204ENST00000558394 C2orf82Q6UX34 121 aa10.41□□□□□ -0.74
TSPAN3-204ENST00000558394 SMIM7Q9BQ49 75 aa10.41□□□□□ -0.74
TSPAN3-204ENST00000558394 C22orf24Q9Y442 160 aa10.41□□□□□ -0.74
TSPAN3-204ENST00000558394 MUC17Q685J3 4493 aa10.41□□□□□ -0.74
TSPAN3-204ENST00000558394 FSIP2Q5CZC0 6907 aa10.4□□□□□ -0.74
TSPAN3-204ENST00000558394 KIAA0087Q14695 138 aa10.4□□□□□ -0.74
TSPAN3-204ENST00000558394 MRPS36P82909 103 aaKnown RBP10.39□□□□□ -0.75
TSPAN3-204ENST00000558394 LINC00173Q6ZV60 143 aa10.39□□□□□ -0.75
TSPAN3-204ENST00000558394 LINC01551Q86U37 167 aa10.39□□□□□ -0.75
TSPAN3-204ENST00000558394 EIF5A2Q9GZV4 153 aaKnown RBP10.39□□□□□ -0.75
TSPAN3-204ENST00000558394 hCG_2014768A0A024R1R8 64 aa10.38□□□□□ -0.75
TSPAN3-204ENST00000558394 BCE1O60756 84 aa10.38□□□□□ -0.75
TSPAN3-204ENST00000558394 LINC01547P58512 204 aaPredicted RBP10.38□□□□□ -0.75
TSPAN3-204ENST00000558394 LINC00304Q8N9R0 145 aa10.38□□□□□ -0.75
TSPAN3-204ENST00000558394 ZNF727A8MUV8 499 aa10.37□□□□□ -0.75
TSPAN3-204ENST00000558394 PRSS2P07478 247 aa10.37□□□□□ -0.75
TSPAN3-204ENST00000558394 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
TSPAN3-204ENST00000558394 LINC00469Q8N7U9 141 aa10.37□□□□□ -0.75
TSPAN3-204ENST00000558394 C20orf78Q9BR46 151 aa10.37□□□□□ -0.75
TSPAN3-204ENST00000558394 CRCT1Q9UGL9 99 aa10.37□□□□□ -0.75
TSPAN3-204ENST00000558394 OSTCQ9NRP0 149 aa10.36□□□□□ -0.75
TSPAN3-204ENST00000558394 FAM104AQ969W3 186 aa10.35□□□□□ -0.75
TSPAN3-204ENST00000558394 ANAPC11Q9NYG5 84 aa10.35□□□□□ -0.75
TSPAN3-204ENST00000558394 LINC00862A6NCI5 91 aa10.34□□□□□ -0.75
TSPAN3-204ENST00000558394 CKS2P33552 79 aa10.34□□□□□ -0.75
TSPAN3-204ENST00000558394 CKS1BP61024 79 aa10.34□□□□□ -0.75
TSPAN3-204ENST00000558394 MRPL51Q4U2R6 128 aaKnown RBP10.34□□□□□ -0.75
TSPAN3-204ENST00000558394 MRPL55Q7Z7F7 128 aaKnown RBP10.34□□□□□ -0.75
TSPAN3-204ENST00000558394 XAGE1AQ9HD64 81 aa10.34□□□□□ -0.75
TSPAN3-204ENST00000558394 SRP19P09132 144 aaKnown RBP10.33□□□□□ -0.76
TSPAN3-204ENST00000558394 IFI27P40305 119 aaPredicted RBP10.33□□□□□ -0.76
TSPAN3-204ENST00000558394 RPL32P62910 135 aaKnown RBP10.33□□□□□ -0.76
TSPAN3-204ENST00000558394 LINC00242Q5T6M2 205 aa10.33□□□□□ -0.76
TSPAN3-204ENST00000558394 TOMM7Q9P0U1 55 aa10.33□□□□□ -0.76
TSPAN3-204ENST00000558394 TP73-AS1Q9UF72 201 aa10.33□□□□□ -0.76
TSPAN3-204ENST00000558394 V9GYV3 84 aa10.33□□□□□ -0.76
TSPAN3-204ENST00000558394 TRBV24-1A0A075B6N3 115 aa10.32□□□□□ -0.76
TSPAN3-204ENST00000558394 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
TSPAN3-204ENST00000558394 KRTAP13-2Q52LG2 175 aa10.32□□□□□ -0.76
TSPAN3-204ENST00000558394 FAM104BQ5XKR9 115 aa10.32□□□□□ -0.76
TSPAN3-204ENST00000558394 SMIM2Q9BVW6 85 aa10.32□□□□□ -0.76
TSPAN3-204ENST00000558394 C6orf226Q5I0X4 101 aa10.31□□□□□ -0.76
TSPAN3-204ENST00000558394 PPDPFQ9H3Y8 114 aa10.31□□□□□ -0.76
TSPAN3-204ENST00000558394 TNFRSF6BO95407 300 aa10.3□□□□□ -0.76
TSPAN3-204ENST00000558394 UBE2AP49459 152 aa10.3□□□□□ -0.76
TSPAN3-204ENST00000558394 FAM229BQ4G0N7 80 aa10.3□□□□□ -0.76
TSPAN3-204ENST00000558394 LINC01561Q8N1V8 128 aa10.3□□□□□ -0.76
TSPAN3-204ENST00000558394 NAT8BQ9UHF3 227 aa10.3□□□□□ -0.76
TSPAN3-204ENST00000558394 RPL37AP8A6NKH3 93 aa10.29□□□□□ -0.76
TSPAN3-204ENST00000558394 CTAG1AP78358 180 aa10.29□□□□□ -0.76
TSPAN3-204ENST00000558394 RAB5AP20339 215 aa10.28□□□□□ -0.76
TSPAN3-204ENST00000558394 ADIRFQ15847 76 aa10.28□□□□□ -0.76
TSPAN3-204ENST00000558394 Q6ZN92 141 aa10.28□□□□□ -0.76
TSPAN3-204ENST00000558394 TEX43Q6ZNM6 134 aa10.28□□□□□ -0.76
TSPAN3-204ENST00000558394 LINC00337Q8N6G1 96 aa10.28□□□□□ -0.76
TSPAN3-204ENST00000558394 TMEM141Q96I45 108 aa10.28□□□□□ -0.76
TSPAN3-204ENST00000558394 C2orf88Q9BSF0 95 aa10.28□□□□□ -0.76
TSPAN3-204ENST00000558394 RPL23P62829 140 aaKnown RBP10.27□□□□□ -0.77
TSPAN3-204ENST00000558394 FAM74A3Q4VXF1 159 aa10.27□□□□□ -0.77
TSPAN3-204ENST00000558394 LINC00167Q96N53 147 aa10.26□□□□□ -0.77
TSPAN3-204ENST00000558394 ALKBH7Q9BT30 221 aaPredicted RBP10.26□□□□□ -0.77
TSPAN3-204ENST00000558394 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
TSPAN3-204ENST00000558394 IGLV4-3A0A075B6K6 122 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms