RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PTTG1IPP53801 180 aa7.46□□□□□ -1.22
HERC1-202ENST00000558324 PNRC1Q12796 327 aaPredicted RBP7.46□□□□□ -1.22
HERC1-202ENST00000558324 ORAOV1Q8WV07 137 aa7.46□□□□□ -1.22
HERC1-202ENST00000558324 A0A0J9YXV3 536 aa7.45□□□□□ -1.22
HERC1-202ENST00000558324 ATP6V1G1O75348 118 aa7.45□□□□□ -1.22
HERC1-202ENST00000558324 IFI27P40305 119 aaPredicted RBP7.45□□□□□ -1.22
HERC1-202ENST00000558324 MRPS36P82909 103 aaKnown RBP7.45□□□□□ -1.22
HERC1-202ENST00000558324 RPL18AQ02543 176 aaKnown RBP7.45□□□□□ -1.22
HERC1-202ENST00000558324 MAP1LC3AQ9H492 121 aa7.45□□□□□ -1.22
HERC1-202ENST00000558324 HMCN2Q8NDA2 5059 aa7.45□□□□□ -1.22
HERC1-202ENST00000558324 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.44□□□□□ -1.22
HERC1-202ENST00000558324 MT1HL1P0DM35 61 aa7.44□□□□□ -1.22
HERC1-202ENST00000558324 ANAPC16Q96DE5 110 aa7.44□□□□□ -1.22
HERC1-202ENST00000558324 C2orf48Q96LS8 159 aa7.44□□□□□ -1.22
HERC1-202ENST00000558324 IGHV3OR16-9A0A0B4J2B5 98 aa7.43□□□□□ -1.22
HERC1-202ENST00000558324 OR10D4PQ8NGN7 298 aa7.43□□□□□ -1.22
HERC1-202ENST00000558324 PLA2G2DQ9UNK4 145 aa7.43□□□□□ -1.22
HERC1-202ENST00000558324 IGLV4-3A0A075B6K6 122 aa7.42□□□□□ -1.22
HERC1-202ENST00000558324 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
HERC1-202ENST00000558324 A0A1W2PNN7 141 aa7.42□□□□□ -1.22
HERC1-202ENST00000558324 NDUFA5Q16718 116 aa7.42□□□□□ -1.22
HERC1-202ENST00000558324 LAMTOR2Q9Y2Q5 125 aa7.42□□□□□ -1.22
HERC1-202ENST00000558324 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
HERC1-202ENST00000558324 CLLU1Q5K131 121 aa7.41□□□□□ -1.22
HERC1-202ENST00000558324 C10orf25Q5T742 122 aa7.41□□□□□ -1.22
HERC1-202ENST00000558324 ZC2HC1BQ5TFG8 222 aa7.41□□□□□ -1.22
HERC1-202ENST00000558324 TMEM141Q96I45 108 aa7.41□□□□□ -1.22
HERC1-202ENST00000558324 NDUFA1O15239 70 aa7.4□□□□□ -1.22
HERC1-202ENST00000558324 LINC00242Q5T6M2 205 aa7.4□□□□□ -1.22
HERC1-202ENST00000558324 C2orf66Q6UXQ4 117 aa7.4□□□□□ -1.22
HERC1-202ENST00000558324 TEX43Q6ZNM6 134 aa7.4□□□□□ -1.22
HERC1-202ENST00000558324 Q6ZRP5 223 aa7.4□□□□□ -1.22
HERC1-202ENST00000558324 Q8N8P6 123 aa7.4□□□□□ -1.22
HERC1-202ENST00000558324 CTDSP1Q9GZU7 261 aa7.4□□□□□ -1.22
HERC1-202ENST00000558324 MRPL35Q9NZE8 188 aaKnown RBP7.4□□□□□ -1.22
HERC1-202ENST00000558324 CYSLTR1Q9Y271 337 aa7.4□□□□□ -1.22
HERC1-202ENST00000558324 PYGO1Q9Y3Y4 419 aa7.4□□□□□ -1.22
HERC1-202ENST00000558324 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
HERC1-202ENST00000558324 ADCYAP1P18509 176 aa7.39□□□□□ -1.23
HERC1-202ENST00000558324 RNF151Q2KHN1 245 aa7.39□□□□□ -1.23
HERC1-202ENST00000558324 UNQ6190/PRO20217Q6UXQ8 127 aa7.39□□□□□ -1.23
HERC1-202ENST00000558324 Q6ZN92 141 aa7.39□□□□□ -1.23
HERC1-202ENST00000558324 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
HERC1-202ENST00000558324 A0A087WZ39 114 aa7.38□□□□□ -1.23
HERC1-202ENST00000558324 UBE2D1P51668 147 aa7.38□□□□□ -1.23
HERC1-202ENST00000558324 KIAA1644Q3SXP7 199 aa7.38□□□□□ -1.23
HERC1-202ENST00000558324 ORMDL2Q53FV1 153 aa7.38□□□□□ -1.23
HERC1-202ENST00000558324 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
HERC1-202ENST00000558324 IMMP2LQ96T52 175 aa7.38□□□□□ -1.23
HERC1-202ENST00000558324 C6orf48Q9UBA6 75 aa7.38□□□□□ -1.23
HERC1-202ENST00000558324 FAM168BA1KXE4 195 aa7.37□□□□□ -1.23
HERC1-202ENST00000558324 S100A1P23297 94 aa7.37□□□□□ -1.23
HERC1-202ENST00000558324 GAGE2EQ4V326 116 aa7.37□□□□□ -1.23
HERC1-202ENST00000558324 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
HERC1-202ENST00000558324 C2orf82Q6UX34 121 aa7.37□□□□□ -1.23
HERC1-202ENST00000558324 LINC00173Q6ZV60 143 aa7.37□□□□□ -1.23
HERC1-202ENST00000558324 VCX2Q9H322 139 aa7.37□□□□□ -1.23
HERC1-202ENST00000558324 GAGE2DQ9UEU5 116 aa7.37□□□□□ -1.23
HERC1-202ENST00000558324 TMEM218A2RU14 115 aa7.36□□□□□ -1.23
HERC1-202ENST00000558324 F8WDY8 70 aa7.36□□□□□ -1.23
HERC1-202ENST00000558324 MT-ND6P03923 174 aa7.36□□□□□ -1.23
HERC1-202ENST00000558324 IFITM2Q01629 132 aa7.36□□□□□ -1.23
HERC1-202ENST00000558324 ODF1Q14990 250 aa7.36□□□□□ -1.23
HERC1-202ENST00000558324 UQCC3Q6UW78 93 aa7.36□□□□□ -1.23
HERC1-202ENST00000558324 FAM19A5Q7Z5A7 132 aaPredicted RBP7.36□□□□□ -1.23
HERC1-202ENST00000558324 LINC01600Q96MT4 127 aa7.36□□□□□ -1.23
HERC1-202ENST00000558324 NXT2Q9NPJ8 142 aaKnown RBP7.36□□□□□ -1.23
HERC1-202ENST00000558324 PSORS1C2Q9UIG4 136 aa7.36□□□□□ -1.23
HERC1-202ENST00000558324 TNXBP22105 4242 aa7.35□□□□□ -1.23
HERC1-202ENST00000558324 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
HERC1-202ENST00000558324 REG3GQ6UW15 175 aa7.35□□□□□ -1.23
HERC1-202ENST00000558324 AMELXQ99217 191 aa7.35□□□□□ -1.23
HERC1-202ENST00000558324 IGIPA6NJ69 53 aa7.34□□□□□ -1.23
HERC1-202ENST00000558324 K7EMI3 77 aa7.34□□□□□ -1.23
HERC1-202ENST00000558324 TLX1NBP0CAT3 122 aa7.34□□□□□ -1.23
HERC1-202ENST00000558324 SRSF9Q13242 221 aaKnown RBP eCLIP7.34□□□□□ -1.23
HERC1-202ENST00000558324 C1orf137Q5JT78 98 aa7.34□□□□□ -1.23
HERC1-202ENST00000558324 TOMM7Q9P0U1 55 aa7.34□□□□□ -1.23
HERC1-202ENST00000558324 PRSS2P07478 247 aa7.33□□□□□ -1.24
HERC1-202ENST00000558324 COMMD7Q86VX2 200 aa7.33□□□□□ -1.24
HERC1-202ENST00000558324 PACRGQ96M98 296 aaPredicted RBP7.33□□□□□ -1.24
HERC1-202ENST00000558324 TRAV9-1A0A075B6T8 112 aa7.32□□□□□ -1.24
HERC1-202ENST00000558324 TRBV30A0A0K0K1B3 111 aa7.32□□□□□ -1.24
HERC1-202ENST00000558324 S100PP25815 95 aa7.32□□□□□ -1.24
HERC1-202ENST00000558324 SEC11CQ9BY50 192 aa7.32□□□□□ -1.24
HERC1-202ENST00000558324 NDUFC2-KCTD14E9PQ53 114 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 M0QXV9 152 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 NPSP0C0P6 89 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 CKS1BP61024 79 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 PAPPA-AS1Q5QFB9 102 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 KRTAP11-1Q8IUC1 163 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 LINC01561Q8N1V8 128 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 TOMM6Q96B49 74 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 TIMM17AQ99595 171 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 GEMIN7Q9H840 131 aaKnown RBP7.31□□□□□ -1.24
HERC1-202ENST00000558324 CDKN2A-AS1Q9UH64 79 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 UBR4Q5T4S7 5183 aa7.31□□□□□ -1.24
HERC1-202ENST00000558324 G0S2P27469 103 aa7.3□□□□□ -1.24
HERC1-202ENST00000558324 HERVK_113P63121 156 aa7.3□□□□□ -1.24
HERC1-202ENST00000558324 UBE2BP63146 152 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms