RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 HIST1H2BCP62807 126 aa8□□□□□ -1.13
HMGB1P8-201ENST00000558211 HIST2H2BEQ16778 126 aa8□□□□□ -1.13
HMGB1P8-201ENST00000558211 HIST2H2BFQ5QNW6 126 aaPredicted RBP8□□□□□ -1.13
HMGB1P8-201ENST00000558211 Q6ZRN7 208 aaPredicted RBP8□□□□□ -1.13
HMGB1P8-201ENST00000558211 HIST1H2BHQ93079 126 aa8□□□□□ -1.13
HMGB1P8-201ENST00000558211 CHCHD1Q96BP2 118 aaKnown RBP8□□□□□ -1.13
HMGB1P8-201ENST00000558211 HIST1H2BNQ99877 126 aa8□□□□□ -1.13
HMGB1P8-201ENST00000558211 HIST1H2BMQ99879 126 aa8□□□□□ -1.13
HMGB1P8-201ENST00000558211 PYGO1Q9Y3Y4 419 aa8□□□□□ -1.13
HMGB1P8-201ENST00000558211 IGLV4-3A0A075B6K6 122 aa7.99□□□□□ -1.13
HMGB1P8-201ENST00000558211 TRAV13-1A0A0B4J241 112 aa7.99□□□□□ -1.13
HMGB1P8-201ENST00000558211 LINC00959A0A1B0GUT2 108 aa7.99□□□□□ -1.13
HMGB1P8-201ENST00000558211 HSBP1O75506 76 aa7.99□□□□□ -1.13
HMGB1P8-201ENST00000558211 SERF1AO75920 110 aa7.99□□□□□ -1.13
HMGB1P8-201ENST00000558211 HBDP02042 147 aa7.99□□□□□ -1.13
HMGB1P8-201ENST00000558211 ZC2HC1BQ5TFG8 222 aa7.99□□□□□ -1.13
HMGB1P8-201ENST00000558211 FAM104AQ969W3 186 aa7.99□□□□□ -1.13
HMGB1P8-201ENST00000558211 TMEM141Q96I45 108 aa7.99□□□□□ -1.13
HMGB1P8-201ENST00000558211 FRAS1Q86XX4 4008 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 A0A096LNJ9 63 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 TRAV8-4A0A0B4J246 113 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 NUPR1O60356 82 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 MRPS36P82909 103 aaKnown RBP7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 SS18Q15532 418 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 Q6ZN92 141 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 ERASQ7Z444 233 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 FAM19A2Q8N3H0 131 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 CHCHD10Q8WYQ3 142 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 VCX2Q9H322 139 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 COX11Q9Y6N1 276 aa7.98□□□□□ -1.13
HMGB1P8-201ENST00000558211 IFITM10A6NMD0 228 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 LECT2O14960 151 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 CCL25O15444 150 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 XCL1P47992 114 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 NDUFA6P56556 154 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 TEX43Q6ZNM6 134 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 LINC00336Q6ZUF6 198 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 MAPKAPK5-AS1Q8N8E1 139 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 BAALCQ8WXS3 180 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 TIMM17AQ99595 171 aa7.97□□□□□ -1.13
HMGB1P8-201ENST00000558211 DNAH17Q9UFH2 4485 aa7.96□□□□□ -1.14
HMGB1P8-201ENST00000558211 GAGE10A6NGK3 116 aa7.96□□□□□ -1.14
HMGB1P8-201ENST00000558211 LINC01549A6NIU2 74 aa7.96□□□□□ -1.14
HMGB1P8-201ENST00000558211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P8-201ENST00000558211 PAPPA-AS1Q5QFB9 102 aa7.95□□□□□ -1.14
HMGB1P8-201ENST00000558211 CFAP161Q6P656 301 aa7.95□□□□□ -1.14
HMGB1P8-201ENST00000558211 KRTAP26-1Q6PEX3 210 aa7.95□□□□□ -1.14
HMGB1P8-201ENST00000558211 C2orf88Q9BSF0 95 aa7.95□□□□□ -1.14
HMGB1P8-201ENST00000558211 WFDC2Q14508 124 aa7.94□□□□□ -1.14
HMGB1P8-201ENST00000558211 PDZD11Q5EBL8 140 aa7.94□□□□□ -1.14
HMGB1P8-201ENST00000558211 LINC00173Q6ZV60 143 aa7.94□□□□□ -1.14
HMGB1P8-201ENST00000558211 AMELXQ99217 191 aa7.94□□□□□ -1.14
HMGB1P8-201ENST00000558211 A0A087WTM6 91 aa7.93□□□□□ -1.14
HMGB1P8-201ENST00000558211 LRCOL1A6NCL2 159 aa7.93□□□□□ -1.14
HMGB1P8-201ENST00000558211 ATP5LO75964 103 aa7.93□□□□□ -1.14
HMGB1P8-201ENST00000558211 FABP4P15090 132 aa7.93□□□□□ -1.14
HMGB1P8-201ENST00000558211 LEPROTL1O95214 131 aa7.92□□□□□ -1.14
HMGB1P8-201ENST00000558211 PRSS1P07477 247 aa7.92□□□□□ -1.14
HMGB1P8-201ENST00000558211 UBE2D1P51668 147 aa7.92□□□□□ -1.14
HMGB1P8-201ENST00000558211 CD164L2Q6UWJ8 174 aa7.92□□□□□ -1.14
HMGB1P8-201ENST00000558211 C5orf38Q86SI9 138 aa7.92□□□□□ -1.14
HMGB1P8-201ENST00000558211 IFI27L1Q96BM0 104 aa7.92□□□□□ -1.14
HMGB1P8-201ENST00000558211 A0A0J9YXV3 536 aa7.91□□□□□ -1.14
HMGB1P8-201ENST00000558211 USP17L23D6RBM5 183 aa7.91□□□□□ -1.14
HMGB1P8-201ENST00000558211 H0Y8G0 127 aa7.91□□□□□ -1.14
HMGB1P8-201ENST00000558211 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGB1P8-201ENST00000558211 COX6A2Q02221 97 aa7.91□□□□□ -1.14
HMGB1P8-201ENST00000558211 PMVKQ15126 192 aa7.91□□□□□ -1.14
HMGB1P8-201ENST00000558211 LINC00242Q5T6M2 205 aa7.91□□□□□ -1.14
HMGB1P8-201ENST00000558211 NTN5Q8WTR8 489 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P8-201ENST00000558211 CST9LQ9H4G1 147 aa7.91□□□□□ -1.14
HMGB1P8-201ENST00000558211 FAT2Q9NYQ8 4349 aa7.9□□□□□ -1.14
HMGB1P8-201ENST00000558211 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P8-201ENST00000558211 SCGB1D1O95968 90 aa7.9□□□□□ -1.14
HMGB1P8-201ENST00000558211 COX7A2LO14548 114 aa7.89□□□□□ -1.15
HMGB1P8-201ENST00000558211 SPATA12Q7Z6I5 190 aa7.89□□□□□ -1.15
HMGB1P8-201ENST00000558211 Q8N814 137 aa7.89□□□□□ -1.15
HMGB1P8-201ENST00000558211 GEMIN7Q9H840 131 aaKnown RBP7.89□□□□□ -1.15
HMGB1P8-201ENST00000558211 S100A6P06703 90 aa7.88□□□□□ -1.15
HMGB1P8-201ENST00000558211 HIGD2BQ4VC39 106 aa7.88□□□□□ -1.15
HMGB1P8-201ENST00000558211 COA6Q5JTJ3 125 aaKnown RBP7.88□□□□□ -1.15
HMGB1P8-201ENST00000558211 HSPB8Q9UJY1 196 aa7.88□□□□□ -1.15
HMGB1P8-201ENST00000558211 IGHV3OR16-9A0A0B4J2B5 98 aa7.87□□□□□ -1.15
HMGB1P8-201ENST00000558211 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
HMGB1P8-201ENST00000558211 hDV102S1A0JD36 115 aa7.87□□□□□ -1.15
HMGB1P8-201ENST00000558211 SEC11AP67812 179 aa7.87□□□□□ -1.15
HMGB1P8-201ENST00000558211 C14orf177Q52M58 125 aa7.87□□□□□ -1.15
HMGB1P8-201ENST00000558211 C15orf56Q8N910 161 aa7.87□□□□□ -1.15
HMGB1P8-201ENST00000558211 CHTOPQ9Y3Y2 248 aaKnown RBP7.87□□□□□ -1.15
HMGB1P8-201ENST00000558211 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
HMGB1P8-201ENST00000558211 HERVK_113P63121 156 aa7.86□□□□□ -1.15
HMGB1P8-201ENST00000558211 LINC00469Q8N7U9 141 aa7.86□□□□□ -1.15
HMGB1P8-201ENST00000558211 LINC00526Q96FQ7 95 aa7.86□□□□□ -1.15
HMGB1P8-201ENST00000558211 DNAH11Q96DT5 4516 aa7.85□□□□□ -1.15
HMGB1P8-201ENST00000558211 TINCRA0A1B0GVN0 87 aa7.85□□□□□ -1.15
HMGB1P8-201ENST00000558211 APOMO95445 188 aa7.85□□□□□ -1.15
HMGB1P8-201ENST00000558211 FAM19A3Q7Z5A8 133 aa7.85□□□□□ -1.15
HMGB1P8-201ENST00000558211 CHAC1Q9BUX1 264 aa7.85□□□□□ -1.15
HMGB1P8-201ENST00000558211 MAP1LC3CQ9BXW4 147 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms