RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GTF2H5Q6ZYL4 71 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 PRR26Q8N8Z3 221 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 FER1L6-AS1Q8NA97 138 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 OR10AG1Q8NH19 301 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 DIRC1Q969H9 104 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 FMC1Q96HJ9 113 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 KRTAP3-1Q9BYR8 98 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 GFRA4Q9GZZ7 299 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 TMEM126AQ9H061 195 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 SS18L2Q9UHA2 77 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 HSPB8Q9UJY1 196 aa3.17□□□□□ -1.9
SPG11-208ENST00000558155 BORCS7-ASMTA0A0B4J1R7 106 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 TRAV1-1A0A0B4J248 108 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 IGKV3OR2-268A0A0C4DH90 116 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 MUC21A0A140T8X8 626 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 M0QY20 66 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 CCL25O15444 150 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 CXCL1P09341 107 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 OR5AL1P0C617 328 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 MALP21145 153 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 H2BFSP57053 126 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 RPL24P83731 157 aaKnown RBP3.16□□□□□ -1.9
SPG11-208ENST00000558155 GAGE2BQ13066 116 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 JOSD1Q15040 202 aaPredicted RBP3.16□□□□□ -1.9
SPG11-208ENST00000558155 PMVKQ15126 192 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 C1orf137Q5JT78 98 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 OR10D4PQ8NGN7 298 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 CHCHD10Q8WYQ3 142 aaPredicted RBP3.16□□□□□ -1.9
SPG11-208ENST00000558155 NAT8Q9UHE5 227 aa3.16□□□□□ -1.9
SPG11-208ENST00000558155 CARHSP1Q9Y2V2 147 aaKnown RBP3.16□□□□□ -1.9
SPG11-208ENST00000558155 IGLV1-50A0A075B6I6 118 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 IGHV1-58A0A0C4DH39 117 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 LOC107984640A0A0U1RRK4 108 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 A0A1W2PNN7 141 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 MAP1LC3B2A6NCE7 125 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 INMT-MINDY4F8WBC2 141 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 LTAP01374 205 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 MGPP08493 103 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 ESDP10768 282 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 AMTP48728 403 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 SYCNQ0VAF6 134 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 AMMECR1LQ6DCA0 310 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 RASL11AQ6T310 242 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 PGLYRP4Q96LB8 373 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 CARD19Q96LW7 228 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 AP1S3Q96PC3 154 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 MARVELD1Q9BSK0 173 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 MAP1LC3BQ9GZQ8 125 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 MED28Q9H204 178 aa3.15□□□□□ -1.91
SPG11-208ENST00000558155 CTXND1A0A1B0GTU2 59 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 H7C423 109 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 IGLV7-43P04211 117 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 FGF6P10767 208 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 RAB5AP20339 215 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 RPL13AP40429 203 aaKnown RBP3.14□□□□□ -1.91
SPG11-208ENST00000558155 UBE2D1P51668 147 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 FOXI1Q12951 378 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 SUMO4Q6EEV6 95 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 SEC11CQ9BY50 192 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 CTDSP1Q9GZU7 261 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 LPAP08519 4548 aa3.14□□□□□ -1.91
SPG11-208ENST00000558155 A0A087WZ39 114 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 COLCA2A8K830 154 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 XCL1P47992 114 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 GNG4P50150 75 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 SS18Q15532 418 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 C9orf116Q5BN46 136 aaPredicted RBP3.13□□□□□ -1.91
SPG11-208ENST00000558155 C10orf91Q5T1B1 145 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 CD164L2Q6UWJ8 174 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 BAGE2Q86Y30 109 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 CBLN2Q8IUK8 224 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 TSKUQ8WUA8 353 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 LINC00526Q96FQ7 95 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 MIEN1Q9BRT3 115 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 ERG28Q9UKR5 140 aa3.13□□□□□ -1.91
SPG11-208ENST00000558155 IGLV4-69A0A075B6H9 119 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 F2Z2F3 143 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 G3V3Q6 166 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 H0Y9J4 135 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 NCR2O95944 276 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 TRGC1P0CF51 173 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 NDUFA6P56556 154 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 ZNF726P1Q15940 193 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 PHF5AQ7RTV0 110 aaKnown RBP3.12□□□□□ -1.91
SPG11-208ENST00000558155 OR5A1Q8NGJ0 315 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 TMEM101Q96IK0 257 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 MLST8Q9BVC4 326 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 MAP1LC3AQ9H492 121 aa3.12□□□□□ -1.91
SPG11-208ENST00000558155 LINC00959A0A1B0GUT2 108 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 J3KT08 172 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 APOMO95445 188 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 NTF3P20783 257 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 SMAGPQ0VAQ4 97 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 NUP35Q8NFH5 326 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 MBD3L1Q8WWY6 194 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 CAMK2N2Q96S95 79 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 ANAPC13Q9BS18 74 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 PRO0628Q9UI54 55 aa3.11□□□□□ -1.91
SPG11-208ENST00000558155 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
SPG11-208ENST00000558155 TINCRA0A1B0GVN0 87 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms