RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ZNF492Q9P255 531 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 FUT9Q9Y231 359 aa3.27□□□□□ -1.89
RTF1-204ENST00000558117 IGKV2D-24A0A075B6R9 120 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 CTXND1A0A1B0GTU2 59 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 OR7C2O60412 319 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 PFN1P07737 140 aaKnown RBP3.26□□□□□ -1.89
RTF1-204ENST00000558117 ARL14EPLP0DKL9 152 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 FGF6P10767 208 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 GCHFRP30047 84 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 LINC00313P59037 77 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 RHOBP62745 196 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 NDUFA5Q16718 116 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 PSMG4Q5JS54 123 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 DPPA3Q6W0C5 159 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 LINC00305Q7Z4B0 112 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 WFDC10BQ8IUB3 73 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 SMIM20Q8N5G0 67 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 LINC00052Q96N35 136 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 HIGD1AQ9Y241 93 aa3.26□□□□□ -1.89
RTF1-204ENST00000558117 TRAV30A0A087WSZ9 112 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 B4DEV8 164 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 C9JCJ5 164 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 PDE6DO43924 150 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 CXorf1O96002 111 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 SFTA3P0C7M3 94 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 HLA-DRB4P13762 266 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 YPEL3P61236 119 aaPredicted RBP3.25□□□□□ -1.89
RTF1-204ENST00000558117 UBE2L3P68036 154 aaKnown RBP3.25□□□□□ -1.89
RTF1-204ENST00000558117 PEA15Q15121 130 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 LYPD5Q6UWN5 251 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 C10orf126Q8N4M7 172 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 FAM167A-AS1Q96KT0 104 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 BIN3Q9NQY0 253 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 KCNIP2Q9NS61 270 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 HLA-DRB4X5D2U9 266 aa3.25□□□□□ -1.89
RTF1-204ENST00000558117 TRAV1-1A0A0B4J248 108 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 TMEM223A0PJW6 202 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 TMEM218A2RU14 115 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 ZNF98A6NK75 572 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 F8W036 122 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 H3BQ15 152 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 M0R381 172 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 APOC3P02656 99 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 SRP19P09132 144 aaKnown RBP3.24□□□□□ -1.89
RTF1-204ENST00000558117 BCL2P10415 239 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 NPPCP23582 126 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 AKR1C3P42330 323 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 TAS2R45P59539 299 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 GNG5P63218 68 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 GDF5OSQ5U4N7 250 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 LINC01551Q86U37 167 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 EXOC3-AS1Q8N2X6 119 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 CYB561D1Q8N8Q1 229 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 PFDN5Q99471 154 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 SHANK2-AS3Q9BTD1 123 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 RNASE7Q9H1E1 156 aaKnown RBP3.24□□□□□ -1.89
RTF1-204ENST00000558117 SLC35B3Q9H1N7 401 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 MED9Q9NWA0 146 aa3.24□□□□□ -1.89
RTF1-204ENST00000558117 IGKV2-28A0A075B6P5 120 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 TRAV26-2A0A0B4J265 109 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 IBA57-AS1B1ANH7 110 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 H3BRN7 92 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 SLC17A3O00476 420 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 APOMO95445 188 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 IGKV2D-28P01615 120 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 ADCYAP1P18509 176 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 CRYBB3P26998 211 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 BTN1A1Q13410 526 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 KHDC3LQ587J8 217 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 SPINK6Q6UWN8 80 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 DAZ4Q86SG3 579 aaKnown RBP3.23□□□□□ -1.89
RTF1-204ENST00000558117 OR8I2Q8N0Y5 310 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 RNF182Q8N6D2 247 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 DERL1Q9BUN8 251 aa3.23□□□□□ -1.89
RTF1-204ENST00000558117 MRPL32Q9BYC8 188 aaKnown RBP3.23□□□□□ -1.89
RTF1-204ENST00000558117 GGTLC3B5MD39 225 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 SLC25A5P05141 298 aaKnown RBP3.22□□□□□ -1.89
RTF1-204ENST00000558117 S100A1P23297 94 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 S100A2P29034 98 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 DEFB1P60022 68 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 MEF2BQ02080 365 aaPredicted RBP3.22□□□□□ -1.89
RTF1-204ENST00000558117 ZFP2Q6ZN57 461 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 BPIFA4PQ86YQ2 179 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 ZNF664Q8N3J9 261 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 EIF4E3Q8N5X7 224 aaKnown RBP3.22□□□□□ -1.89
RTF1-204ENST00000558117 OR13C6PQ8NH95 151 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 MANBALQ9NQG1 85 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 TMEM167BQ9NRX6 74 aa3.22□□□□□ -1.89
RTF1-204ENST00000558117 TRBV19A0A075B6N1 114 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 ZNF727A8MUV8 499 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 M0R3E3 92 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 IGLC2P0DOY2 106 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 CNBPP62633 177 aaKnown RBP3.21□□□□□ -1.9
RTF1-204ENST00000558117 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms