RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CLPSL1A2RUU4 121 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 HMGN4O00479 90 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 LEPROTL1O95214 131 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 HRES1P13985 223 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 ARFGEF3Q5TH69 2177 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 Q6JHZ5 121 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 KRTAP26-1Q6PEX3 210 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 DOCK10Q96BY6 2186 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 HIGD2AQ9BW72 106 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 NDUFA4L2Q9NRX3 87 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 MRPL36Q9P0J6 103 aaKnown RBP1.36□□□□□ -2.19
SPG11-206ENST00000558093 R4GN34 69 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 ALKQ9UM73 1620 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 ABCA4P78363 2273 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 POLR1AO95602 1720 aaPredicted RBP1.35□□□□□ -2.19
SPG11-206ENST00000558093 RICTORQ6R327 1708 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 ADGRB2O60241 1585 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 CEP170BQ9Y4F5 1589 aaPredicted RBP1.35□□□□□ -2.19
SPG11-206ENST00000558093 NUPR2A6NF83 97 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 SNRPGP15A8MWD9 76 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 PSCAO43653 123 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 IGHV3-33P01772 117 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 CTSGP08311 255 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 C1orf137Q5JT78 98 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 NDUFA11Q86Y39 141 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 FDCSPQ8NFU4 85 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 ZNF831Q5JPB2 1677 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 NHSQ6T4R5 1651 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 ABCC6O95255 1503 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 EHBP1L1Q8N3D4 1523 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 TJP1Q07157 1748 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 FMN2Q9NZ56 1722 aa1.35□□□□□ -2.19
SPG11-206ENST00000558093 PAPPA2Q9BXP8 1791 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 CICQ96RK0 1608 aaPredicted RBP1.34□□□□□ -2.19
SPG11-206ENST00000558093 BIVM-ERCC5R4GMW8 1640 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 IGKV3-7A0A075B6H7 116 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 TRBV6-8A0A0A6YYG3 113 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 A0A0D9SFI3 127 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 LOC101927531A0A1B0GV80 90 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 HCRTO43612 131 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 PPP1R17O96001 155 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 ARMS2P0C7Q2 107 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 S100A3P33764 101 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 CNBPP62633 177 aaKnown RBP1.34□□□□□ -2.19
SPG11-206ENST00000558093 SSBP1Q04837 148 aaKnown RBP1.34□□□□□ -2.19
SPG11-206ENST00000558093 SPAG11BQ08648 103 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 PDE6HQ13956 83 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 SPAG11AQ6PDA7 123 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 DMAC1Q96GE9 116 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 Q9BRP9 147 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 PRR15LQ9BU68 103 aa1.34□□□□□ -2.19
SPG11-206ENST00000558093 SLIT2O94813 1529 aa1.34□□□□□ -2.2
SPG11-206ENST00000558093 MAST1Q9Y2H9 1570 aa1.34□□□□□ -2.2
SPG11-206ENST00000558093 USP32Q8NFA0 1604 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 CD163L1Q9NR16 1453 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 FREM1Q5H8C1 2179 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 NRAPQ86VF7 1730 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 A0A0J9YY99 117 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 HIGD1CA8MV81 97 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 D6R8Y8 96 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 M0R3E3 92 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 IGHV3-30P01768 117 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 SAA2P0DJI9 122 aaPredicted RBP1.33□□□□□ -2.2
SPG11-206ENST00000558093 IGHV3-30-5P0DP03 117 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 IFI27P40305 119 aaPredicted RBP1.33□□□□□ -2.2
SPG11-206ENST00000558093 ELOF1P60002 83 aaKnown RBP1.33□□□□□ -2.2
SPG11-206ENST00000558093 MUSTN1Q8IVN3 82 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 ORMDL1Q9P0S3 153 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 PRO2289Q9P1D8 64 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 UBE2D4Q9Y2X8 147 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 LENEPQ9Y5L5 61 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 SNURFQ9Y675 71 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 PRRC2BQ5JSZ5 2229 aaKnown RBP1.33□□□□□ -2.2
SPG11-206ENST00000558093 SPAG17Q6Q759 2223 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 LRRC37A3O60309 1634 aa1.33□□□□□ -2.2
SPG11-206ENST00000558093 MUC6Q6W4X9 2439 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 C5P01031 1676 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 SDK1Q7Z5N4 2213 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 MRC1P22897 1456 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 KIAA0586Q9BVV6 1533 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 J3QKU1 62 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 PPYP01298 95 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 ATXN8Q156A1 80 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 ATP5EP2Q5VTU8 51 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 Q6ZTI0 123 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 INTS1Q8N201 2190 aaKnown RBP1.32□□□□□ -2.2
SPG11-206ENST00000558093 LRP6O75581 1613 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 BRWD1Q9NSI6 2320 aa1.32□□□□□ -2.2
SPG11-206ENST00000558093 ATP7BP35670 1465 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 ZMYM4Q5VZL5 1548 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 IQGAP2Q13576 1575 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 PHRF1Q9P1Y6 1649 aaKnown RBP1.31□□□□□ -2.2
SPG11-206ENST00000558093 A0A087WVE0 104 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 A0A0G2JQZ4 141 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 IGLV3-1P01715 115 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 GDF5OSQ5U4N7 250 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 PPP1R1CQ8WVI7 109 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 PATE1Q8WXA2 126 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
SPG11-206ENST00000558093 PSORS1C2Q9UIG4 136 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms