RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 FAM236AA0A1B0GUQ0 79 aa4.2□□□□□ -1.74
TRPM1-204ENST00000557948 FAM236BA0A1B0GV22 79 aa4.2□□□□□ -1.74
TRPM1-204ENST00000557948 C11orf86A6NJI1 115 aa4.2□□□□□ -1.74
TRPM1-204ENST00000557948 H3BRN7 92 aa4.2□□□□□ -1.74
TRPM1-204ENST00000557948 NDUFA3O95167 84 aa4.2□□□□□ -1.74
TRPM1-204ENST00000557948 HIST1H4AP62805 103 aaKnown RBP4.2□□□□□ -1.74
TRPM1-204ENST00000557948 VMA21Q3ZAQ7 101 aa4.2□□□□□ -1.74
TRPM1-204ENST00000557948 C2orf82Q6UX34 121 aa4.2□□□□□ -1.74
TRPM1-204ENST00000557948 C5orf38Q86SI9 138 aa4.2□□□□□ -1.74
TRPM1-204ENST00000557948 TMEM263Q8WUH6 116 aaKnown RBP4.2□□□□□ -1.74
TRPM1-204ENST00000557948 C11orf68Q9H3H3 251 aaKnown RBP4.2□□□□□ -1.74
TRPM1-204ENST00000557948 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
TRPM1-204ENST00000557948 TMSB15BA0A087X1C1 80 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 IGHV3-72A0A0B4J1Y9 119 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 SDHAF1A6NFY7 115 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 M0R381 172 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 MRPS12O15235 138 aaKnown RBP4.19□□□□□ -1.74
TRPM1-204ENST00000557948 ATP6V0E1O15342 81 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 SMR3BP02814 79 aaPredicted RBP4.19□□□□□ -1.74
TRPM1-204ENST00000557948 WT1-ASQ06250 92 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 ERCC8Q13216 396 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 ZNF56Q15929 161 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 ECSCRQ19T08 205 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 C17orf58Q2M2W7 97 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 TRPT1Q86TN4 253 aaKnown RBP4.19□□□□□ -1.74
TRPM1-204ENST00000557948 Q8N6K4 173 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 NRACQ8N912 160 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 DYNLRB2Q8TF09 96 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 DPH3Q96FX2 82 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 SCGB3A1Q96QR1 104 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 METTL26Q96S19 204 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 SLC50A1Q9BRV3 221 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 SMIM2Q9BVW6 85 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 PEMTQ9UBM1 199 aa4.19□□□□□ -1.74
TRPM1-204ENST00000557948 TRAV10A0A0B4J240 114 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 TEX49A0A1B0GTD5 131 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 RBAKDNA6NC62 111 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 SMKR1H3BMG3 65 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 PRYO14603 147 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 FXYD7P58549 80 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 KRTAP10-2P60368 255 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 LINC00311Q8N616 119 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 DAND5Q8N907 189 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 TMEM141Q96I45 108 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 AGPAT4-IT1Q9H0P7 198 aa4.18□□□□□ -1.74
TRPM1-204ENST00000557948 NACAE9PAV3 2078 aa4.17□□□□□ -1.74
TRPM1-204ENST00000557948 LOC107984640A0A0U1RRK4 108 aa4.17□□□□□ -1.74
TRPM1-204ENST00000557948 DEFB4AO15263 64 aa4.17□□□□□ -1.74
TRPM1-204ENST00000557948 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
TRPM1-204ENST00000557948 EXOC3-AS1Q8N2X6 119 aa4.17□□□□□ -1.74
TRPM1-204ENST00000557948 C6orf223Q8N319 242 aa4.17□□□□□ -1.74
TRPM1-204ENST00000557948 COPS9Q8WXC6 57 aa4.17□□□□□ -1.74
TRPM1-204ENST00000557948 PLEKHB2Q96CS7 222 aa4.17□□□□□ -1.74
TRPM1-204ENST00000557948 C2orf48Q96LS8 159 aa4.17□□□□□ -1.74
TRPM1-204ENST00000557948 IGHV1-3A0A0C4DH29 117 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 CGB1A6NKQ9 187 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 H7C423 109 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 LST1O00453 97 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 LEPROTO15243 131 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 NDUFC2O95298 119 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 IGKV1-16P04430 117 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 LGALS3P17931 250 aaKnown RBP4.16□□□□□ -1.74
TRPM1-204ENST00000557948 LYZP61626 148 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 DEFB114Q30KQ6 69 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 FAM222AQ5U5X8 452 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 Q6ZTC4 211 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 SERP2Q8N6R1 65 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 TIMM17AQ99595 171 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 LRP2P98164 4655 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 MUC2Q02817 5179 aa4.16□□□□□ -1.74
TRPM1-204ENST00000557948 TRAV13-1A0A0B4J241 112 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 TMEM223A0PJW6 202 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 J3QQQ9 107 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 IGLV2-23P01705 113 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 TRGV3P03979 118 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 RPL27AP46776 148 aaKnown RBP4.15□□□□□ -1.75
TRPM1-204ENST00000557948 CRIP2P52943 208 aaPredicted RBP4.15□□□□□ -1.75
TRPM1-204ENST00000557948 MRPS36P82909 103 aaKnown RBP4.15□□□□□ -1.75
TRPM1-204ENST00000557948 RPL18AQ02543 176 aaKnown RBP4.15□□□□□ -1.75
TRPM1-204ENST00000557948 Q1RN00 199 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 LEAP2Q969E1 77 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 AMELXQ99217 191 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 RNF5Q99942 180 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 MRPL36Q9P0J6 103 aaKnown RBP4.15□□□□□ -1.75
TRPM1-204ENST00000557948 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.75
TRPM1-204ENST00000557948 DEFB131BA0A096LNP1 70 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 IGHV7-81A0A0B4J1V7 117 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 A0A0J9YXY3 114 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 BCE1O60756 84 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 RPL35AP18077 110 aaKnown RBP4.14□□□□□ -1.75
TRPM1-204ENST00000557948 ZNF415Q09FC8 603 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 Q5XG85 94 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 C2orf66Q6UXQ4 117 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 DCANP1Q8TF63 244 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 DEFB104AQ8WTQ1 72 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 MRPL53Q96EL3 112 aaKnown RBP4.14□□□□□ -1.75
TRPM1-204ENST00000557948 JPT2Q9H910 190 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 LENEPQ9Y5L5 61 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 ICOSQ9Y6W8 199 aa4.14□□□□□ -1.75
TRPM1-204ENST00000557948 IGLV4-69A0A075B6H9 119 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms