RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 Q8N814 137 aa9.32□□□□□ -0.92
SUPT16H-208ENST00000557652 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
SUPT16H-208ENST00000557652 CST9LQ9H4G1 147 aa9.32□□□□□ -0.92
SUPT16H-208ENST00000557652 DNAH2Q9P225 4427 aa9.32□□□□□ -0.92
SUPT16H-208ENST00000557652 TRAV12-1A0A0B4J245 112 aa9.31□□□□□ -0.92
SUPT16H-208ENST00000557652 IGHV1-58A0A0C4DH39 117 aa9.31□□□□□ -0.92
SUPT16H-208ENST00000557652 PMCHL1Q16048 86 aa9.31□□□□□ -0.92
SUPT16H-208ENST00000557652 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
SUPT16H-208ENST00000557652 IFI27L1Q96BM0 104 aa9.31□□□□□ -0.92
SUPT16H-208ENST00000557652 TINCRA0A1B0GVN0 87 aa9.3□□□□□ -0.92
SUPT16H-208ENST00000557652 USP17L23D6RBM5 183 aa9.3□□□□□ -0.92
SUPT16H-208ENST00000557652 MALP21145 153 aa9.3□□□□□ -0.92
SUPT16H-208ENST00000557652 GEMIN7Q9H840 131 aaKnown RBP9.3□□□□□ -0.92
SUPT16H-208ENST00000557652 A0A087WZ39 114 aa9.29□□□□□ -0.92
SUPT16H-208ENST00000557652 F8WDY8 70 aa9.29□□□□□ -0.92
SUPT16H-208ENST00000557652 FAM19A2Q8N3H0 131 aa9.29□□□□□ -0.92
SUPT16H-208ENST00000557652 GVQW2A0A096LPI5 108 aaPredicted RBP9.28□□□□□ -0.92
SUPT16H-208ENST00000557652 PRSS1P07477 247 aa9.28□□□□□ -0.92
SUPT16H-208ENST00000557652 OR10D4PQ8NGN7 298 aa9.28□□□□□ -0.92
SUPT16H-208ENST00000557652 IGLV5-45A0A087WSX0 123 aa9.27□□□□□ -0.93
SUPT16H-208ENST00000557652 NUPR1O60356 82 aa9.27□□□□□ -0.93
SUPT16H-208ENST00000557652 NDUFA6P56556 154 aa9.27□□□□□ -0.93
SUPT16H-208ENST00000557652 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.26□□□□□ -0.93
SUPT16H-208ENST00000557652 IGLC3P0DOY3 106 aa9.26□□□□□ -0.93
SUPT16H-208ENST00000557652 CNBPP62633 177 aaKnown RBP9.26□□□□□ -0.93
SUPT16H-208ENST00000557652 WFDC2Q14508 124 aa9.26□□□□□ -0.93
SUPT16H-208ENST00000557652 C15orf56Q8N910 161 aa9.26□□□□□ -0.93
SUPT16H-208ENST00000557652 PKIGQ9Y2B9 76 aa9.26□□□□□ -0.93
SUPT16H-208ENST00000557652 FAT2Q9NYQ8 4349 aa9.25□□□□□ -0.93
SUPT16H-208ENST00000557652 IGHV3-64A0A075B6Q5 118 aa9.25□□□□□ -0.93
SUPT16H-208ENST00000557652 H3BRM9 83 aa9.25□□□□□ -0.93
SUPT16H-208ENST00000557652 S100A6P06703 90 aa9.25□□□□□ -0.93
SUPT16H-208ENST00000557652 SPATA12Q7Z6I5 190 aa9.25□□□□□ -0.93
SUPT16H-208ENST00000557652 MAP1LC3CQ9BXW4 147 aa9.25□□□□□ -0.93
SUPT16H-208ENST00000557652 A0A0J9YXV3 536 aa9.24□□□□□ -0.93
SUPT16H-208ENST00000557652 hDV102S1A0JD36 115 aa9.24□□□□□ -0.93
SUPT16H-208ENST00000557652 F8VRH5 84 aa9.24□□□□□ -0.93
SUPT16H-208ENST00000557652 ZNF561-AS1K7EIQ3 104 aa9.24□□□□□ -0.93
SUPT16H-208ENST00000557652 LECT2O14960 151 aa9.24□□□□□ -0.93
SUPT16H-208ENST00000557652 ZC2HC1BQ5TFG8 222 aa9.24□□□□□ -0.93
SUPT16H-208ENST00000557652 C5orf38Q86SI9 138 aa9.24□□□□□ -0.93
SUPT16H-208ENST00000557652 C2orf48Q96LS8 159 aa9.24□□□□□ -0.93
SUPT16H-208ENST00000557652 CHTOPQ9Y3Y2 248 aaKnown RBP9.24□□□□□ -0.93
SUPT16H-208ENST00000557652 IGLV5-52A0A0A0MRZ9 124 aa9.23□□□□□ -0.93
SUPT16H-208ENST00000557652 AKR1D1P51857 326 aa9.23□□□□□ -0.93
SUPT16H-208ENST00000557652 COX6A2Q02221 97 aa9.23□□□□□ -0.93
SUPT16H-208ENST00000557652 LINC00469Q8N7U9 141 aa9.23□□□□□ -0.93
SUPT16H-208ENST00000557652 CHAC1Q9BUX1 264 aa9.23□□□□□ -0.93
SUPT16H-208ENST00000557652 FABP4P15090 132 aa9.22□□□□□ -0.93
SUPT16H-208ENST00000557652 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
SUPT16H-208ENST00000557652 IGLV4-69A0A075B6H9 119 aa9.21□□□□□ -0.94
SUPT16H-208ENST00000557652 PLNP26678 52 aa9.21□□□□□ -0.94
SUPT16H-208ENST00000557652 KRTAP10-2P60368 255 aa9.21□□□□□ -0.94
SUPT16H-208ENST00000557652 ORAOV1Q8WV07 137 aa9.21□□□□□ -0.94
SUPT16H-208ENST00000557652 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
SUPT16H-208ENST00000557652 S100A2P29034 98 aa9.2□□□□□ -0.94
SUPT16H-208ENST00000557652 CXCL5P42830 114 aa9.2□□□□□ -0.94
SUPT16H-208ENST00000557652 SPAG11BQ08648 103 aa9.2□□□□□ -0.94
SUPT16H-208ENST00000557652 ODF1Q14990 250 aa9.2□□□□□ -0.94
SUPT16H-208ENST00000557652 PET117Q6UWS5 81 aa9.2□□□□□ -0.94
SUPT16H-208ENST00000557652 Q8IZM0 81 aa9.2□□□□□ -0.94
SUPT16H-208ENST00000557652 C9orf163Q8N9P6 203 aa9.2□□□□□ -0.94
SUPT16H-208ENST00000557652 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.19□□□□□ -0.94
SUPT16H-208ENST00000557652 SYS1-DBNDD2H3BUS1 97 aa9.19□□□□□ -0.94
SUPT16H-208ENST00000557652 GCSHP23434 173 aa9.19□□□□□ -0.94
SUPT16H-208ENST00000557652 RNF151Q2KHN1 245 aa9.19□□□□□ -0.94
SUPT16H-208ENST00000557652 SFTA2Q6UW10 78 aa9.19□□□□□ -0.94
SUPT16H-208ENST00000557652 MRPL35Q9NZE8 188 aaKnown RBP9.19□□□□□ -0.94
SUPT16H-208ENST00000557652 HECTD4Q9Y4D8 3996 aa9.19□□□□□ -0.94
SUPT16H-208ENST00000557652 C11orf86A6NJI1 115 aa9.18□□□□□ -0.94
SUPT16H-208ENST00000557652 SMIM1B2RUZ4 78 aa9.18□□□□□ -0.94
SUPT16H-208ENST00000557652 PRSS2P07478 247 aa9.18□□□□□ -0.94
SUPT16H-208ENST00000557652 ZNF22P17026 224 aaPredicted RBP9.18□□□□□ -0.94
SUPT16H-208ENST00000557652 PKD1P98161 4303 aa9.18□□□□□ -0.94
SUPT16H-208ENST00000557652 SYCNQ0VAF6 134 aa9.18□□□□□ -0.94
SUPT16H-208ENST00000557652 HIGD2BQ4VC39 106 aa9.18□□□□□ -0.94
SUPT16H-208ENST00000557652 HIST3H2BBQ8N257 126 aa9.18□□□□□ -0.94
SUPT16H-208ENST00000557652 NDUFA1O15239 70 aa9.17□□□□□ -0.94
SUPT16H-208ENST00000557652 DPM2O94777 84 aa9.17□□□□□ -0.94
SUPT16H-208ENST00000557652 TMEM170BQ5T4T1 132 aa9.17□□□□□ -0.94
SUPT16H-208ENST00000557652 CARD19Q96LW7 228 aa9.17□□□□□ -0.94
SUPT16H-208ENST00000557652 CAMK2N2Q96S95 79 aa9.17□□□□□ -0.94
SUPT16H-208ENST00000557652 IGLV5-39A0A0G2JS06 123 aa9.16□□□□□ -0.94
SUPT16H-208ENST00000557652 C20orf202A1L168 122 aa9.16□□□□□ -0.94
SUPT16H-208ENST00000557652 KIAA0087Q14695 138 aa9.16□□□□□ -0.94
SUPT16H-208ENST00000557652 LINC01545Q5VT33 79 aa9.16□□□□□ -0.94
SUPT16H-208ENST00000557652 TRBV30A0A0K0K1B3 111 aa9.15□□□□□ -0.94
SUPT16H-208ENST00000557652 C5orf52A6NGY3 159 aa9.15□□□□□ -0.94
SUPT16H-208ENST00000557652 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.94
SUPT16H-208ENST00000557652 H0Y8G0 127 aa9.14□□□□□ -0.95
SUPT16H-208ENST00000557652 IGKCP01834 107 aa9.14□□□□□ -0.95
SUPT16H-208ENST00000557652 SLPIP03973 132 aa9.14□□□□□ -0.95
SUPT16H-208ENST00000557652 C3orf79P0CE67 100 aa9.14□□□□□ -0.95
SUPT16H-208ENST00000557652 CKS1BP61024 79 aa9.14□□□□□ -0.95
SUPT16H-208ENST00000557652 COX7B2Q8TF08 81 aa9.14□□□□□ -0.95
SUPT16H-208ENST00000557652 HIST1H2BLQ99880 126 aa9.14□□□□□ -0.95
SUPT16H-208ENST00000557652 DNAH11Q96DT5 4516 aa9.13□□□□□ -0.95
SUPT16H-208ENST00000557652 TMEM223A0PJW6 202 aa9.13□□□□□ -0.95
SUPT16H-208ENST00000557652 SPINK8P0C7L1 97 aa9.13□□□□□ -0.95
SUPT16H-208ENST00000557652 HERVK_113P61574 105 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms