RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 USP17L23D6RBM5 183 aa10.06□□□□□ -0.8
NEDD1-213ENST00000557644 FUSP35637 526 aaKnown RBP eCLIP10.06□□□□□ -0.8
NEDD1-213ENST00000557644 C5orf38Q86SI9 138 aa10.06□□□□□ -0.8
NEDD1-213ENST00000557644 PRSS1P07477 247 aa10.06□□□□□ -0.8
NEDD1-213ENST00000557644 IGHV3OR16-9A0A0B4J2B5 98 aa10.05□□□□□ -0.8
NEDD1-213ENST00000557644 A0A1B0GVY2 172 aa10.04□□□□□ -0.8
NEDD1-213ENST00000557644 Q8N814 137 aa10.04□□□□□ -0.8
NEDD1-213ENST00000557644 H0Y8G0 127 aa10.03□□□□□ -0.8
NEDD1-213ENST00000557644 COX7A2LO14548 114 aa10.03□□□□□ -0.8
NEDD1-213ENST00000557644 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
NEDD1-213ENST00000557644 HSPB8Q9UJY1 196 aa10.03□□□□□ -0.8
NEDD1-213ENST00000557644 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
NEDD1-213ENST00000557644 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
NEDD1-213ENST00000557644 EPPK1P58107 5090 aaKnown RBP10.02□□□□□ -0.81
NEDD1-213ENST00000557644 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.02□□□□□ -0.81
NEDD1-213ENST00000557644 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
NEDD1-213ENST00000557644 EREGO14944 169 aa10.01□□□□□ -0.81
NEDD1-213ENST00000557644 S100A6P06703 90 aa10.01□□□□□ -0.81
NEDD1-213ENST00000557644 MALP21145 153 aa10.01□□□□□ -0.81
NEDD1-213ENST00000557644 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
NEDD1-213ENST00000557644 SPATA12Q7Z6I5 190 aa10.01□□□□□ -0.81
NEDD1-213ENST00000557644 GEMIN7Q9H840 131 aaKnown RBP10.01□□□□□ -0.81
NEDD1-213ENST00000557644 CDKN2A-AS1Q9UH64 79 aa10.01□□□□□ -0.81
NEDD1-213ENST00000557644 TINCRA0A1B0GVN0 87 aa10.01□□□□□ -0.81
NEDD1-213ENST00000557644 HERVK_113P63121 156 aa10□□□□□ -0.81
NEDD1-213ENST00000557644 A0A087WZ39 114 aa10□□□□□ -0.81
NEDD1-213ENST00000557644 TRAV12-1A0A0B4J245 112 aa10□□□□□ -0.81
NEDD1-213ENST00000557644 hDV102S1A0JD36 115 aa10□□□□□ -0.81
NEDD1-213ENST00000557644 SEC11AP67812 179 aa10□□□□□ -0.81
NEDD1-213ENST00000557644 LINC00526Q96FQ7 95 aa10□□□□□ -0.81
NEDD1-213ENST00000557644 CHTOPQ9Y3Y2 248 aaKnown RBP10□□□□□ -0.81
NEDD1-213ENST00000557644 DNAH5Q8TE73 4624 aa10□□□□□ -0.81
NEDD1-213ENST00000557644 IGLC3P0DOY3 106 aa9.99□□□□□ -0.81
NEDD1-213ENST00000557644 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
NEDD1-213ENST00000557644 HIST3H2BBQ8N257 126 aa9.99□□□□□ -0.81
NEDD1-213ENST00000557644 LINC00469Q8N7U9 141 aa9.99□□□□□ -0.81
NEDD1-213ENST00000557644 CHAC1Q9BUX1 264 aa9.99□□□□□ -0.81
NEDD1-213ENST00000557644 MRPL35Q9NZE8 188 aaKnown RBP9.99□□□□□ -0.81
NEDD1-213ENST00000557644 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
NEDD1-213ENST00000557644 IGHV1-58A0A0C4DH39 117 aa9.98□□□□□ -0.81
NEDD1-213ENST00000557644 ODF1Q14990 250 aa9.98□□□□□ -0.81
NEDD1-213ENST00000557644 MAP1LC3CQ9BXW4 147 aa9.98□□□□□ -0.81
NEDD1-213ENST00000557644 C11orf86A6NJI1 115 aa9.97□□□□□ -0.81
NEDD1-213ENST00000557644 C14orf177Q52M58 125 aa9.97□□□□□ -0.81
NEDD1-213ENST00000557644 PMCHL2Q9BQD1 86 aa9.97□□□□□ -0.81
NEDD1-213ENST00000557644 IGLV5-45A0A087WSX0 123 aa9.97□□□□□ -0.81
NEDD1-213ENST00000557644 NTN5Q8WTR8 489 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-213ENST00000557644 GVQW2A0A096LPI5 108 aaPredicted RBP9.96□□□□□ -0.81
NEDD1-213ENST00000557644 F8VRH5 84 aa9.96□□□□□ -0.81
NEDD1-213ENST00000557644 SLPIP03973 132 aa9.96□□□□□ -0.81
NEDD1-213ENST00000557644 PACRGQ96M98 296 aaPredicted RBP9.96□□□□□ -0.81
NEDD1-213ENST00000557644 TMA7Q9Y2S6 64 aaKnown RBP9.96□□□□□ -0.81
NEDD1-213ENST00000557644 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.82
NEDD1-213ENST00000557644 ORAOV1Q8WV07 137 aa9.96□□□□□ -0.82
NEDD1-213ENST00000557644 HIST1H2BLQ99880 126 aa9.96□□□□□ -0.82
NEDD1-213ENST00000557644 C5orf52A6NGY3 159 aa9.95□□□□□ -0.82
NEDD1-213ENST00000557644 SYS1-DBNDD2H3BUS1 97 aa9.95□□□□□ -0.82
NEDD1-213ENST00000557644 ZNF22P17026 224 aaPredicted RBP9.95□□□□□ -0.82
NEDD1-213ENST00000557644 APOMO95445 188 aa9.95□□□□□ -0.82
NEDD1-213ENST00000557644 C3orf79P0CE67 100 aa9.95□□□□□ -0.82
NEDD1-213ENST00000557644 S100A2P29034 98 aa9.95□□□□□ -0.82
NEDD1-213ENST00000557644 IGLV5-52A0A0A0MRZ9 124 aa9.94□□□□□ -0.82
NEDD1-213ENST00000557644 SPINK8P0C7L1 97 aa9.94□□□□□ -0.82
NEDD1-213ENST00000557644 LINC01620Q4KN68 170 aa9.94□□□□□ -0.82
NEDD1-213ENST00000557644 SMIM1B2RUZ4 78 aa9.94□□□□□ -0.82
NEDD1-213ENST00000557644 ZNF561-AS1K7EIQ3 104 aa9.94□□□□□ -0.82
NEDD1-213ENST00000557644 KRTDAPP60985 99 aa9.94□□□□□ -0.82
NEDD1-213ENST00000557644 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
NEDD1-213ENST00000557644 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
NEDD1-213ENST00000557644 PGPEP1Q9NXJ5 209 aa9.94□□□□□ -0.82
NEDD1-213ENST00000557644 LINC01561Q8N1V8 128 aa9.93□□□□□ -0.82
NEDD1-213ENST00000557644 OR10D4PQ8NGN7 298 aa9.93□□□□□ -0.82
NEDD1-213ENST00000557644 KIAA0087Q14695 138 aa9.92□□□□□ -0.82
NEDD1-213ENST00000557644 TOMM7Q9P0U1 55 aa9.92□□□□□ -0.82
NEDD1-213ENST00000557644 LRP1BQ9NZR2 4599 aa9.91□□□□□ -0.82
NEDD1-213ENST00000557644 DYNC1H1Q14204 4646 aaKnown RBP9.91□□□□□ -0.82
NEDD1-213ENST00000557644 H3BRM9 83 aa9.91□□□□□ -0.82
NEDD1-213ENST00000557644 CNBPP62633 177 aaKnown RBP9.91□□□□□ -0.82
NEDD1-213ENST00000557644 C16orf90A8MZG2 172 aa9.9□□□□□ -0.82
NEDD1-213ENST00000557644 CDPF1Q6NVV7 123 aa9.9□□□□□ -0.82
NEDD1-213ENST00000557644 LINC01545Q5VT33 79 aa9.9□□□□□ -0.82
NEDD1-213ENST00000557644 PET117Q6UWS5 81 aa9.9□□□□□ -0.82
NEDD1-213ENST00000557644 DPM2O94777 84 aa9.89□□□□□ -0.83
NEDD1-213ENST00000557644 PLNP26678 52 aa9.89□□□□□ -0.83
NEDD1-213ENST00000557644 C2orf82Q6UX34 121 aa9.89□□□□□ -0.83
NEDD1-213ENST00000557644 CAMK2N2Q96S95 79 aa9.89□□□□□ -0.83
NEDD1-213ENST00000557644 IGKCP01834 107 aa9.88□□□□□ -0.83
NEDD1-213ENST00000557644 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
NEDD1-213ENST00000557644 Q6ZRU5 148 aa9.88□□□□□ -0.83
NEDD1-213ENST00000557644 TMEM223A0PJW6 202 aa9.88□□□□□ -0.83
NEDD1-213ENST00000557644 SYCNQ0VAF6 134 aa9.88□□□□□ -0.83
NEDD1-213ENST00000557644 IGLV5-39A0A0G2JS06 123 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 PRSS2P07478 247 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 GCSHP23434 173 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 UNQ6190/PRO20217Q6UXQ8 127 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 Q8IZM0 81 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 C9orf163Q8N9P6 203 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms