RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 HIST1H2BDP58876 126 aa4.93□□□□□ -1.62
RD3L-201ENST00000557640 HIST1H2BCP62807 126 aa4.93□□□□□ -1.62
RD3L-201ENST00000557640 HIST2H2BEQ16778 126 aa4.93□□□□□ -1.62
RD3L-201ENST00000557640 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.93□□□□□ -1.62
RD3L-201ENST00000557640 SMIM15Q7Z3B0 74 aa4.93□□□□□ -1.62
RD3L-201ENST00000557640 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.93□□□□□ -1.62
RD3L-201ENST00000557640 HIST1H2BHQ93079 126 aa4.93□□□□□ -1.62
RD3L-201ENST00000557640 PRELID3AQ96N28 172 aa4.93□□□□□ -1.62
RD3L-201ENST00000557640 HIST1H2BNQ99877 126 aa4.93□□□□□ -1.62
RD3L-201ENST00000557640 HIST1H2BMQ99879 126 aa4.93□□□□□ -1.62
RD3L-201ENST00000557640 NIT2Q9NQR4 276 aa4.93□□□□□ -1.62
RD3L-201ENST00000557640 TRBV10-1A0A0K0K1A3 114 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 LINC01546A6NGU7 62 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 F5H697 171 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 NUPR1O60356 82 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 PPBPP02775 128 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 CKS2P33552 79 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 RBX1P62877 108 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 RPL32P62910 135 aaKnown RBP4.92□□□□□ -1.62
RD3L-201ENST00000557640 ZNF56Q15929 161 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 IQCJQ1A5X6 159 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 ORMDL3Q8N138 153 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 C18orf32Q8TCD1 76 aa4.92□□□□□ -1.62
RD3L-201ENST00000557640 TRBV7-3A0A075B6L6 115 aa4.91□□□□□ -1.62
RD3L-201ENST00000557640 TMEM262E9PQX1 116 aa4.91□□□□□ -1.62
RD3L-201ENST00000557640 IGKV2-30P06310 120 aa4.91□□□□□ -1.62
RD3L-201ENST00000557640 MIAQ16674 131 aa4.91□□□□□ -1.62
RD3L-201ENST00000557640 COA6Q5JTJ3 125 aaKnown RBP4.91□□□□□ -1.62
RD3L-201ENST00000557640 LINC00269Q8N2A0 174 aa4.91□□□□□ -1.62
RD3L-201ENST00000557640 C15orf56Q8N910 161 aa4.91□□□□□ -1.62
RD3L-201ENST00000557640 C20orf78Q9BR46 151 aa4.91□□□□□ -1.62
RD3L-201ENST00000557640 LAMTOR2Q9Y2Q5 125 aa4.91□□□□□ -1.62
RD3L-201ENST00000557640 IGHV3-64A0A075B6Q5 118 aa4.9□□□□□ -1.63
RD3L-201ENST00000557640 TRBV27A0A0K0K1C4 114 aa4.9□□□□□ -1.63
RD3L-201ENST00000557640 hDV102S1A0JD36 115 aa4.9□□□□□ -1.63
RD3L-201ENST00000557640 TSHBP01222 138 aa4.9□□□□□ -1.63
RD3L-201ENST00000557640 IFI27P40305 119 aaPredicted RBP4.9□□□□□ -1.63
RD3L-201ENST00000557640 SUMO2P61956 95 aaKnown RBP4.9□□□□□ -1.63
RD3L-201ENST00000557640 RPL36AP83881 106 aaKnown RBP4.9□□□□□ -1.63
RD3L-201ENST00000557640 GAGE6Q13070 117 aa4.9□□□□□ -1.63
RD3L-201ENST00000557640 RPL36ALQ969Q0 106 aaKnown RBP4.9□□□□□ -1.63
RD3L-201ENST00000557640 CHCHD5Q9BSY4 110 aa4.9□□□□□ -1.63
RD3L-201ENST00000557640 A0A096LNJ9 63 aa4.89□□□□□ -1.63
RD3L-201ENST00000557640 LOC389332A0A1B0GUA5 103 aa4.89□□□□□ -1.63
RD3L-201ENST00000557640 SDHAF1A6NFY7 115 aa4.89□□□□□ -1.63
RD3L-201ENST00000557640 H7C1H1 209 aa4.89□□□□□ -1.63
RD3L-201ENST00000557640 Q8N8P6 123 aa4.89□□□□□ -1.63
RD3L-201ENST00000557640 C20orf203Q8NBC4 194 aa4.89□□□□□ -1.63
RD3L-201ENST00000557640 PRSS3P2Q8NHM4 247 aa4.89□□□□□ -1.63
RD3L-201ENST00000557640 SMIM2Q9BVW6 85 aa4.89□□□□□ -1.63
RD3L-201ENST00000557640 ST20Q9HBF5 79 aa4.89□□□□□ -1.63
RD3L-201ENST00000557640 IGLV4-60A0A075B6I1 120 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 A0A096LNI7 61 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 IGKV2-24A0A0C4DH68 120 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 C1orf196B1AJZ1 125 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 VCYO14598 125 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 TCAPO15273 167 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 PPP1R17O96001 155 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 ESDP10768 282 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 COX6A2Q02221 97 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 FAM104AQ969W3 186 aa4.88□□□□□ -1.63
RD3L-201ENST00000557640 IFITM10A6NMD0 228 aa4.87□□□□□ -1.63
RD3L-201ENST00000557640 I3L3M4 83 aa4.87□□□□□ -1.63
RD3L-201ENST00000557640 LINC00614P0C842 121 aa4.87□□□□□ -1.63
RD3L-201ENST00000557640 REG3AQ06141 175 aa4.87□□□□□ -1.63
RD3L-201ENST00000557640 SRSF9Q13242 221 aaKnown RBP eCLIP4.87□□□□□ -1.63
RD3L-201ENST00000557640 MAJINQ3KP22 176 aa4.87□□□□□ -1.63
RD3L-201ENST00000557640 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
RD3L-201ENST00000557640 MAP1LC3AQ9H492 121 aa4.87□□□□□ -1.63
RD3L-201ENST00000557640 C5orf52A6NGY3 159 aa4.86□□□□□ -1.63
RD3L-201ENST00000557640 B5MCH6 92 aa4.86□□□□□ -1.63
RD3L-201ENST00000557640 SERF1AO75920 110 aa4.86□□□□□ -1.63
RD3L-201ENST00000557640 NDUFA6P56556 154 aa4.86□□□□□ -1.63
RD3L-201ENST00000557640 HIGD2BQ4VC39 106 aa4.86□□□□□ -1.63
RD3L-201ENST00000557640 STPG4Q8N801 248 aa4.86□□□□□ -1.63
RD3L-201ENST00000557640 NXT2Q9NPJ8 142 aaKnown RBP4.86□□□□□ -1.63
RD3L-201ENST00000557640 PMCHP20382 165 aa4.85□□□□□ -1.63
RD3L-201ENST00000557640 RAB5BP61020 215 aa4.85□□□□□ -1.63
RD3L-201ENST00000557640 PDZD11Q5EBL8 140 aa4.85□□□□□ -1.63
RD3L-201ENST00000557640 CHCHD1Q96BP2 118 aaKnown RBP4.85□□□□□ -1.63
RD3L-201ENST00000557640 MUC17Q685J3 4493 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 IGHV1-24A0A0C4DH33 117 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 IGIPA6NJ69 53 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 K7EMI3 77 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 FCER1GP30273 86 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 SNRPEP62304 92 aaKnown RBP4.84□□□□□ -1.63
RD3L-201ENST00000557640 PMCHL1Q16048 86 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 SPINK6Q6UWN8 80 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 BAGE3Q86Y29 109 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 HIST3H2BBQ8N257 126 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 FAM19A2Q8N3H0 131 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 DPH3Q96FX2 82 aa4.84□□□□□ -1.63
RD3L-201ENST00000557640 TRBV25-1A0A075B6N4 114 aa4.83□□□□□ -1.64
RD3L-201ENST00000557640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.83□□□□□ -1.64
RD3L-201ENST00000557640 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.83□□□□□ -1.64
RD3L-201ENST00000557640 IGKV2-29A2NJV5 120 aaPredicted RBP4.83□□□□□ -1.64
RD3L-201ENST00000557640 RPL39P62891 51 aaKnown RBP4.83□□□□□ -1.64
RD3L-201ENST00000557640 COTL1Q14019 142 aa4.83□□□□□ -1.64
RD3L-201ENST00000557640 RNASEKQ6P5S7 137 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms