RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 GAGE5Q13069 117 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 GAGE6Q13070 117 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 STHQ8IWL8 128 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 C10orf126Q8N4M7 172 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 Q8TAT8 98 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 BAALCQ8WXS3 180 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 LINC00477Q96M19 166 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 PRADC1Q9BSG0 188 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 AGPAT4-IT1Q9H0P7 198 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 DPH3P1Q9H4G8 78 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 A0A0B4J2C4 111 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 A0A0J9YX75 114 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 A0A0J9YY99 117 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 ZNF815PA8K554 130 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 NXPH4O95158 308 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 GATA1P15976 413 aaPredicted RBP4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 SRSF9Q13242 221 aaKnown RBP eCLIP4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 SPANXN1Q5VSR9 72 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 C2orf66Q6UXQ4 117 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 NFE4Q86UQ8 179 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 SLC25A29Q8N8R3 303 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 C15orf53Q8NAA6 179 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 CARD19Q96LW7 228 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 TIMM17AQ99595 171 aa4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
SPTLC2-206ENST00000557566 TRAV21A0A0B4J279 112 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 RHODO00212 210 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 MT-ATP8P03928 68 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 GIG44P09565 113 aaPredicted RBP4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 SPART-AS1P0CW21 52 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 RPL13AP40429 203 aaKnown RBP4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 PSMB2P49721 201 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 PMVKQ15126 192 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 SCGB1D4Q6XE38 83 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 ZNRF2Q8NHG8 242 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 RASL10AQ92737 203 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
SPTLC2-206ENST00000557566 IGKV3-7A0A075B6H7 116 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 TRAV8-2A0A0B4J237 113 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 LOC107984156A0A0G2JMH3 177 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 TRBV6-5A0A0K0K1A5 114 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 PRAC2D3DTV9 90 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 K7EMT4 169 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 NDUFA4O00483 81 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 PRYO14603 147 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 TCL1BO95988 128 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 IGHV3-30P01768 117 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 SCGB1C2P0DMR2 95 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 IGHV3-30-5P0DP03 117 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 HTN3P15516 51 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 DEFB131AP59861 70 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 ARL17AQ8IVW1 177 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 METTL26Q96S19 204 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 ANAPC13Q9BS18 74 aa4.74□□□□□ -1.65
SPTLC2-206ENST00000557566 IGLV4-69A0A075B6H9 119 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 FAM240AA0A1B0GVK7 77 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 SDHAF1A6NFY7 115 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 IGIPA6NJ69 53 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 VCYO14598 125 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 SLC25A20O43772 301 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 IGHV3-33P01772 117 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 CRYGDP07320 174 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 CFC1BP0CG36 223 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 CFC1P0CG37 223 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 POLR2KP53803 58 aaKnown RBP4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 TTC32Q5I0X7 151 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 TRPT1Q86TN4 253 aaKnown RBP4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 ANKRD29Q8N6D5 301 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 CSNK1G2-AS1Q8NCQ2 148 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 PLEKHB2Q96CS7 222 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 FAM19A4Q96LR4 140 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 FAT3Q8TDW7 4589 aa4.73□□□□□ -1.65
SPTLC2-206ENST00000557566 LRP2P98164 4655 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 IGHV3OR16-8A0A075B7F1 116 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 TRBV30A0A0K0K1B3 111 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 H3BVH4 76 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 LEPROTO15243 131 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 CCL18P55774 89 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 GAGE2BQ13066 116 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 RHOHQ15669 191 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 ATXN8Q156A1 80 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 ZNF876PQ49A33 203 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 GAGE2EQ4V326 116 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 SUMO4Q6EEV6 95 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 ZFP2Q6ZN57 461 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 ZFAND2AQ8N6M9 145 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 AMELXQ99217 191 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 RHPN1-AS1Q9BWJ2 59 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 GAGE2DQ9UEU5 116 aa4.72□□□□□ -1.65
SPTLC2-206ENST00000557566 TRAV26-2A0A0B4J265 109 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 TRBV27A0A0K0K1C4 114 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 H3BT86 120 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 J3QQQ9 107 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 SNCGO76070 127 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 GAGE7O76087 117 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 GAGE12FP0CL80 117 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 GAGE12GP0CL81 117 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms