RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 SERP2Q8N6R1 65 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 UPK3BQ9BT76 320 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 IGHV3OR15-7A0A075B7D8 119 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 MYMXA0A1B0GTQ4 84 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 UBE2L5PA0A1B0GUS4 154 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 C9JCJ5 164 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 C8orf87E5RJ46 101 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 H3BMM0 161 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 H3BVH4 76 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 NDUFS5O43920 106 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 LGALS3P17931 250 aaKnown RBP2.61□□□□□ -1.99
PRPF39-212ENST00000557477 ATP5EP56381 51 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-212ENST00000557477 KRTAP10-8P60410 259 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 PCBD1P61457 104 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 SNRPD3P62318 126 aaKnown RBP2.61□□□□□ -1.99
PRPF39-212ENST00000557477 HIST1H4AP62805 103 aaKnown RBP2.61□□□□□ -1.99
PRPF39-212ENST00000557477 DEFB112Q30KQ8 113 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 TMEM155Q4W5P6 130 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 LINC00643Q86TS7 51 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 PDPNQ86YL7 162 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 DEFB108BQ8NET1 73 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 UBE2WQ96B02 151 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 TRGV9Q99603 122 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 TM2D3Q9BRN9 247 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 OSTCQ9NRP0 149 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 V9GYV3 84 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 ALPK2Q86TB3 2170 aa2.61□□□□□ -1.99
PRPF39-212ENST00000557477 TMSB15BA0A087X1C1 80 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 PIGBOS1A0A0B4J2F0 54 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 LOC107984156A0A0G2JMH3 177 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 SMIM27A0A1W2PRY6 76 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 NDUFB3O43676 98 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 TRBV12-3P01733 135 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 IGHV1-46P01743 117 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 FGF12P61328 243 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 DAD1P61803 113 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 RPL18Q07020 188 aaKnown RBP2.6□□□□□ -1.99
PRPF39-212ENST00000557477 C6orf99Q4VX62 202 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 FP248Q71RG6 208 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-212ENST00000557477 ATP5L2Q7Z4Y8 100 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 C5orf38Q86SI9 138 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 LINC00596Q86U02 117 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 ARL17AQ8IVW1 177 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 IFI27L1Q96BM0 104 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 C11orf68Q9H3H3 251 aaKnown RBP2.6□□□□□ -1.99
PRPF39-212ENST00000557477 CADP27708 2225 aa2.6□□□□□ -1.99
PRPF39-212ENST00000557477 PRR14LQ5THK1 2151 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 PKD1L1Q8TDX9 2849 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 TRBV25-1A0A075B6N4 114 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 IGHV3-49A0A0A0MS15 119 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 C19orf71A6NCJ1 209 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 J3QT63 122 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 HMGN4O00479 90 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 UPK2O00526 184 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 TIMM17BO60830 172 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 IGLV2-8P01709 118 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 NPPCP23582 126 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 CENPWQ5EE01 88 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 FAM104BQ5XKR9 115 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 RPP25LQ8N5L8 163 aaKnown RBP2.59□□□□□ -1.99
PRPF39-212ENST00000557477 OR8A1Q8NGG7 326 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 DCANP1Q8TF63 244 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 SPACA5Q96QH8 159 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 METTL26Q96S19 204 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 S4R3C0 116 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 NOTCH1P46531 2555 aa2.59□□□□□ -1.99
PRPF39-212ENST00000557477 PLCE1Q9P212 2302 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 TRBV7-3A0A075B6L6 115 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 A0A1B0GXF2 115 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 H3BP45 60 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 UBE2L6O14933 153 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 KRTAP5-8O75690 187 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 HBDP02042 147 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 CMC4P56277 68 aaPredicted RBP2.58□□□□□ -2
PRPF39-212ENST00000557477 MIC13Q5XKP0 118 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 UNQ9165/PRO28630Q6UXU0 137 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 KLF14Q8TD94 323 aaPredicted RBP2.58□□□□□ -2
PRPF39-212ENST00000557477 CYSTM1Q9H1C7 97 aa2.58□□□□□ -2
PRPF39-212ENST00000557477 HEATR1Q9H583 2144 aaKnown RBP2.58□□□□□ -2
PRPF39-212ENST00000557477 ARFGEF3Q5TH69 2177 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 TRBV20OR9-2A0A075B6H5 130 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 IGLV3-9A0A075B6K5 115 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 TRAV41A0A0B4J266 112 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 TRBV27A0A0K0K1C4 114 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 TRBV10-2A0A0K0K1G8 114 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 A0A1B0GWA3 101 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 LINC01549A6NIU2 74 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 CPSF4LA6NMK7 179 aaKnown RBP2.57□□□□□ -2
PRPF39-212ENST00000557477 ZNF73O43830 326 aaPredicted RBP2.57□□□□□ -2
PRPF39-212ENST00000557477 SPINK4O60575 86 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 IGHV1-69P01742 117 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 UBE2D1P51668 147 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 ATXN8Q156A1 80 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 FAM222AQ5U5X8 452 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 LYZL2Q7Z4W2 148 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 VMO1Q7Z5L0 202 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 Q96M85 177 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 CHCHD7Q9BUK0 85 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms