RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MT-ND4LP03901 98 aa8.56□□□□□ -1.04
SLIRP-210ENST00000557431 UBE2D4Q9Y2X8 147 aa8.56□□□□□ -1.04
SLIRP-210ENST00000557431 VCYO14598 125 aa8.55□□□□□ -1.04
SLIRP-210ENST00000557431 SUMO2P61956 95 aaKnown RBP8.55□□□□□ -1.04
SLIRP-210ENST00000557431 SPAG11BQ08648 103 aa8.55□□□□□ -1.04
SLIRP-210ENST00000557431 ATP5L2Q7Z4Y8 100 aa8.55□□□□□ -1.04
SLIRP-210ENST00000557431 TRBV24-1A0A075B6N3 115 aa8.54□□□□□ -1.04
SLIRP-210ENST00000557431 TMEM218A2RU14 115 aa8.54□□□□□ -1.04
SLIRP-210ENST00000557431 F8W036 122 aa8.54□□□□□ -1.04
SLIRP-210ENST00000557431 ADCYAP1P18509 176 aa8.54□□□□□ -1.04
SLIRP-210ENST00000557431 FCER1GP30273 86 aa8.54□□□□□ -1.04
SLIRP-210ENST00000557431 CKS2P33552 79 aa8.54□□□□□ -1.04
SLIRP-210ENST00000557431 C1orf196B1AJZ1 125 aa8.53□□□□□ -1.04
SLIRP-210ENST00000557431 IGLV7-43P04211 117 aa8.53□□□□□ -1.04
SLIRP-210ENST00000557431 C2orf48Q96LS8 159 aa8.53□□□□□ -1.04
SLIRP-210ENST00000557431 C20orf78Q9BR46 151 aa8.53□□□□□ -1.04
SLIRP-210ENST00000557431 C10orf25Q5T742 122 aa8.52□□□□□ -1.05
SLIRP-210ENST00000557431 FAM19A5Q7Z5A7 132 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-210ENST00000557431 A0A087WZ39 114 aa8.51□□□□□ -1.05
SLIRP-210ENST00000557431 D6R8Y8 96 aa8.51□□□□□ -1.05
SLIRP-210ENST00000557431 TNFRSF6BO95407 300 aa8.51□□□□□ -1.05
SLIRP-210ENST00000557431 PPBPP02775 128 aa8.51□□□□□ -1.05
SLIRP-210ENST00000557431 RPL39P62891 51 aaKnown RBP8.51□□□□□ -1.05
SLIRP-210ENST00000557431 RPL32P62910 135 aaKnown RBP8.51□□□□□ -1.05
SLIRP-210ENST00000557431 COMMD7Q86VX2 200 aa8.51□□□□□ -1.05
SLIRP-210ENST00000557431 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
SLIRP-210ENST00000557431 KIR2DL4Q99706 377 aa8.51□□□□□ -1.05
SLIRP-210ENST00000557431 SEC11CQ9BY50 192 aa8.51□□□□□ -1.05
SLIRP-210ENST00000557431 H0Y9J4 135 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 NPYP01303 97 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 GAGE2EQ4V326 116 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 TMEM136Q6ZRR5 245 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 ORMDL3Q8N138 153 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 FAM104AQ969W3 186 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 IMMP2LQ96T52 175 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 CTDSP1Q9GZU7 261 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 GAGE2DQ9UEU5 116 aa8.49□□□□□ -1.05
SLIRP-210ENST00000557431 KRTAP1-4P0C5Y4 121 aa8.48□□□□□ -1.05
SLIRP-210ENST00000557431 UNQ6190/PRO20217Q6UXQ8 127 aa8.48□□□□□ -1.05
SLIRP-210ENST00000557431 SMIM2Q9BVW6 85 aa8.48□□□□□ -1.05
SLIRP-210ENST00000557431 C6orf48Q9UBA6 75 aa8.48□□□□□ -1.05
SLIRP-210ENST00000557431 CSDC2Q9Y534 153 aaKnown RBP8.48□□□□□ -1.05
SLIRP-210ENST00000557431 TCAPO15273 167 aa8.47□□□□□ -1.05
SLIRP-210ENST00000557431 PRR4Q16378 134 aa8.47□□□□□ -1.05
SLIRP-210ENST00000557431 C10orf91Q5T1B1 145 aa8.47□□□□□ -1.05
SLIRP-210ENST00000557431 PRELID3AQ96N28 172 aa8.47□□□□□ -1.05
SLIRP-210ENST00000557431 MRPL35Q9NZE8 188 aaKnown RBP8.47□□□□□ -1.05
SLIRP-210ENST00000557431 SMAGPQ0VAQ4 97 aa8.46□□□□□ -1.06
SLIRP-210ENST00000557431 RNF151Q2KHN1 245 aa8.46□□□□□ -1.06
SLIRP-210ENST00000557431 OR10D4PQ8NGN7 298 aa8.46□□□□□ -1.06
SLIRP-210ENST00000557431 TMEM18Q96B42 140 aa8.46□□□□□ -1.06
SLIRP-210ENST00000557431 LAMTOR2Q9Y2Q5 125 aa8.46□□□□□ -1.06
SLIRP-210ENST00000557431 PRSS47A8MTI9 375 aa8.45□□□□□ -1.06
SLIRP-210ENST00000557431 NDUFA1O15239 70 aa8.45□□□□□ -1.06
SLIRP-210ENST00000557431 TIMM21Q9BVV7 248 aa8.45□□□□□ -1.06
SLIRP-210ENST00000557431 CARHSP1Q9Y2V2 147 aaKnown RBP8.45□□□□□ -1.06
SLIRP-210ENST00000557431 TRAV9-1A0A075B6T8 112 aa8.44□□□□□ -1.06
SLIRP-210ENST00000557431 IGHV3OR16-9A0A0B4J2B5 98 aa8.44□□□□□ -1.06
SLIRP-210ENST00000557431 M0QXV9 152 aa8.44□□□□□ -1.06
SLIRP-210ENST00000557431 UBE2BP63146 152 aa8.44□□□□□ -1.06
SLIRP-210ENST00000557431 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
SLIRP-210ENST00000557431 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
SLIRP-210ENST00000557431 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
SLIRP-210ENST00000557431 IFITM10A6NMD0 228 aa8.42□□□□□ -1.06
SLIRP-210ENST00000557431 RAB5AP20339 215 aa8.42□□□□□ -1.06
SLIRP-210ENST00000557431 UBE2D1P51668 147 aa8.42□□□□□ -1.06
SLIRP-210ENST00000557431 C2orf82Q6UX34 121 aa8.42□□□□□ -1.06
SLIRP-210ENST00000557431 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
SLIRP-210ENST00000557431 LOC389332A0A1B0GUA5 103 aa8.41□□□□□ -1.06
SLIRP-210ENST00000557431 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
SLIRP-210ENST00000557431 S100PP25815 95 aa8.41□□□□□ -1.06
SLIRP-210ENST00000557431 KIAA0087Q14695 138 aa8.41□□□□□ -1.06
SLIRP-210ENST00000557431 RHEBQ15382 184 aa8.41□□□□□ -1.06
SLIRP-210ENST00000557431 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
SLIRP-210ENST00000557431 SPANXA1Q9NS26 97 aa8.41□□□□□ -1.06
SLIRP-210ENST00000557431 TSPAN13O95857 204 aa8.4□□□□□ -1.06
SLIRP-210ENST00000557431 Q8N8P6 123 aa8.4□□□□□ -1.06
SLIRP-210ENST00000557431 RPS10P5Q9NQ39 176 aa8.4□□□□□ -1.06
SLIRP-210ENST00000557431 MUC2Q02817 5179 aa8.4□□□□□ -1.06
SLIRP-210ENST00000557431 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
SLIRP-210ENST00000557431 ZC2HC1BQ5TFG8 222 aa8.39□□□□□ -1.07
SLIRP-210ENST00000557431 GNB1LQ9BYB4 327 aa8.39□□□□□ -1.07
SLIRP-210ENST00000557431 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
SLIRP-210ENST00000557431 KIAA1644Q3SXP7 199 aa8.38□□□□□ -1.07
SLIRP-210ENST00000557431 PYGO1Q9Y3Y4 419 aa8.38□□□□□ -1.07
SLIRP-210ENST00000557431 TGIF2-C20orf24A0A0A6YYL0 155 aa8.37□□□□□ -1.07
SLIRP-210ENST00000557431 K7EMI3 77 aa8.37□□□□□ -1.07
SLIRP-210ENST00000557431 APOC3P02656 99 aa8.37□□□□□ -1.07
SLIRP-210ENST00000557431 COX19Q49B96 90 aa8.37□□□□□ -1.07
SLIRP-210ENST00000557431 LINC00469Q8N7U9 141 aa8.37□□□□□ -1.07
SLIRP-210ENST00000557431 NXT2Q9NPJ8 142 aaKnown RBP8.37□□□□□ -1.07
SLIRP-210ENST00000557431 F8WDY8 70 aa8.36□□□□□ -1.07
SLIRP-210ENST00000557431 IFI27P40305 119 aaPredicted RBP8.36□□□□□ -1.07
SLIRP-210ENST00000557431 ORMDL2Q53FV1 153 aa8.36□□□□□ -1.07
SLIRP-210ENST00000557431 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
SLIRP-210ENST00000557431 IGLV4-3A0A075B6K6 122 aa8.35□□□□□ -1.07
SLIRP-210ENST00000557431 NDUFA5Q16718 116 aa8.35□□□□□ -1.07
SLIRP-210ENST00000557431 C2orf66Q6UXQ4 117 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms