RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 ZC2HC1BQ5TFG8 222 aa13.9□□□□□ -0.18
FOXA1-205ENST00000557418 KRTAP26-1Q6PEX3 210 aa13.9□□□□□ -0.18
FOXA1-205ENST00000557418 IGKV3OR2-268A0A0C4DH90 116 aa13.89□□□□□ -0.19
FOXA1-205ENST00000557418 LINC00959A0A1B0GUT2 108 aa13.89□□□□□ -0.19
FOXA1-205ENST00000557418 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.88□□□□□ -0.19
FOXA1-205ENST00000557418 IGLV10-54A0A075B6I4 117 aa13.87□□□□□ -0.19
FOXA1-205ENST00000557418 TRAV8-4A0A0B4J246 113 aa13.87□□□□□ -0.19
FOXA1-205ENST00000557418 ATP5LO75964 103 aa13.87□□□□□ -0.19
FOXA1-205ENST00000557418 Q6ZN92 141 aa13.87□□□□□ -0.19
FOXA1-205ENST00000557418 TEX43Q6ZNM6 134 aa13.87□□□□□ -0.19
FOXA1-205ENST00000557418 VCX2Q9H322 139 aa13.87□□□□□ -0.19
FOXA1-205ENST00000557418 IFITM10A6NMD0 228 aa13.86□□□□□ -0.19
FOXA1-205ENST00000557418 PAPPA-AS1Q5QFB9 102 aa13.86□□□□□ -0.19
FOXA1-205ENST00000557418 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.85□□□□□ -0.19
FOXA1-205ENST00000557418 TRAV13-1A0A0B4J241 112 aa13.85□□□□□ -0.19
FOXA1-205ENST00000557418 LEPROTL1O95214 131 aa13.85□□□□□ -0.19
FOXA1-205ENST00000557418 CHCHD10Q8WYQ3 142 aaPredicted RBP13.85□□□□□ -0.19
FOXA1-205ENST00000557418 IFI27L1Q96BM0 104 aa13.85□□□□□ -0.19
FOXA1-205ENST00000557418 CCL25O15444 150 aa13.84□□□□□ -0.19
FOXA1-205ENST00000557418 UBE2D1P51668 147 aa13.84□□□□□ -0.19
FOXA1-205ENST00000557418 C1orf43Q9BWL3 253 aa13.84□□□□□ -0.19
FOXA1-205ENST00000557418 CST9LQ9H4G1 147 aa13.84□□□□□ -0.19
FOXA1-205ENST00000557418 SMR3BP02814 79 aaPredicted RBP13.83□□□□□ -0.2
FOXA1-205ENST00000557418 FABP4P15090 132 aa13.83□□□□□ -0.2
FOXA1-205ENST00000557418 PMVKQ15126 192 aa13.83□□□□□ -0.2
FOXA1-205ENST00000557418 SS18Q15532 418 aa13.83□□□□□ -0.2
FOXA1-205ENST00000557418 HAMPP81172 84 aa13.82□□□□□ -0.2
FOXA1-205ENST00000557418 FAM19A3Q7Z5A8 133 aa13.82□□□□□ -0.2
FOXA1-205ENST00000557418 HIST3H2BBQ8N257 126 aa13.82□□□□□ -0.2
FOXA1-205ENST00000557418 PACRGQ96M98 296 aaPredicted RBP13.82□□□□□ -0.2
FOXA1-205ENST00000557418 C2orf88Q9BSF0 95 aa13.82□□□□□ -0.2
FOXA1-205ENST00000557418 S100A6P06703 90 aa13.81□□□□□ -0.2
FOXA1-205ENST00000557418 FOXI1Q12951 378 aa13.81□□□□□ -0.2
FOXA1-205ENST00000557418 LINC00242Q5T6M2 205 aa13.81□□□□□ -0.2
FOXA1-205ENST00000557418 FAM30AQ9NZY2 134 aa13.81□□□□□ -0.2
FOXA1-205ENST00000557418 HSPB8Q9UJY1 196 aa13.81□□□□□ -0.2
FOXA1-205ENST00000557418 FAT1Q14517 4588 aa13.81□□□□□ -0.2
FOXA1-205ENST00000557418 DNAH8Q96JB1 4490 aa13.8□□□□□ -0.2
FOXA1-205ENST00000557418 GAGE12HA6NDE8 117 aa13.8□□□□□ -0.2
FOXA1-205ENST00000557418 XCL1P47992 114 aa13.8□□□□□ -0.2
FOXA1-205ENST00000557418 Q5VSD8 79 aa13.8□□□□□ -0.2
FOXA1-205ENST00000557418 C5orf52A6NGY3 159 aa13.79□□□□□ -0.2
FOXA1-205ENST00000557418 FAM229AH3BQW9 127 aa13.79□□□□□ -0.2
FOXA1-205ENST00000557418 SNRPEP62304 92 aaKnown RBP13.79□□□□□ -0.2
FOXA1-205ENST00000557418 CD164L2Q6UWJ8 174 aa13.79□□□□□ -0.2
FOXA1-205ENST00000557418 TRAV12-1A0A0B4J245 112 aa13.78□□□□□ -0.2
FOXA1-205ENST00000557418 PRSS1P07477 247 aa13.78□□□□□ -0.2
FOXA1-205ENST00000557418 COX6A2Q02221 97 aa13.78□□□□□ -0.2
FOXA1-205ENST00000557418 IGHV3OR16-9A0A0B4J2B5 98 aa13.77□□□□□ -0.21
FOXA1-205ENST00000557418 A0A0J9YXV3 536 aa13.77□□□□□ -0.21
FOXA1-205ENST00000557418 INAFM2P0DMQ5 153 aa13.77□□□□□ -0.21
FOXA1-205ENST00000557418 C14orf177Q52M58 125 aa13.77□□□□□ -0.21
FOXA1-205ENST00000557418 IGLV4-69A0A075B6H9 119 aa13.75□□□□□ -0.21
FOXA1-205ENST00000557418 LINC01620Q4KN68 170 aa13.75□□□□□ -0.21
FOXA1-205ENST00000557418 HIST1H2BLQ99880 126 aa13.75□□□□□ -0.21
FOXA1-205ENST00000557418 TINCRA0A1B0GVN0 87 aa13.74□□□□□ -0.21
FOXA1-205ENST00000557418 IGLC3P0DOY3 106 aa13.74□□□□□ -0.21
FOXA1-205ENST00000557418 TMA7Q9Y2S6 64 aaKnown RBP13.74□□□□□ -0.21
FOXA1-205ENST00000557418 ODF1Q14990 250 aa13.73□□□□□ -0.21
FOXA1-205ENST00000557418 Q6ZSA8 131 aa13.73□□□□□ -0.21
FOXA1-205ENST00000557418 MAP1LC3CQ9BXW4 147 aa13.73□□□□□ -0.21
FOXA1-205ENST00000557418 SEC11AP67812 179 aa13.72□□□□□ -0.21
FOXA1-205ENST00000557418 C5orf38Q86SI9 138 aa13.72□□□□□ -0.21
FOXA1-205ENST00000557418 CHTOPQ9Y3Y2 248 aaKnown RBP13.72□□□□□ -0.21
FOXA1-205ENST00000557418 IGLV5-45A0A087WSX0 123 aa13.71□□□□□ -0.21
FOXA1-205ENST00000557418 USP17L23D6RBM5 183 aa13.71□□□□□ -0.21
FOXA1-205ENST00000557418 H0Y8G0 127 aa13.71□□□□□ -0.21
FOXA1-205ENST00000557418 SYS1-DBNDD2H3BUS1 97 aa13.71□□□□□ -0.21
FOXA1-205ENST00000557418 COX7A2LO14548 114 aa13.71□□□□□ -0.21
FOXA1-205ENST00000557418 C3orf79P0CE67 100 aa13.71□□□□□ -0.21
FOXA1-205ENST00000557418 S100A2P29034 98 aa13.71□□□□□ -0.21
FOXA1-205ENST00000557418 HERVK_113P63121 156 aa13.71□□□□□ -0.21
FOXA1-205ENST00000557418 MRPL35Q9NZE8 188 aaKnown RBP13.71□□□□□ -0.21
FOXA1-205ENST00000557418 F8VRH5 84 aa13.7□□□□□ -0.22
FOXA1-205ENST00000557418 A0A087WZ39 114 aa13.69□□□□□ -0.22
FOXA1-205ENST00000557418 C11orf86A6NJI1 115 aa13.69□□□□□ -0.22
FOXA1-205ENST00000557418 C15orf56Q8N910 161 aa13.69□□□□□ -0.22
FOXA1-205ENST00000557418 CHAC1Q9BUX1 264 aa13.69□□□□□ -0.22
FOXA1-205ENST00000557418 GEMIN7Q9H840 131 aaKnown RBP13.69□□□□□ -0.22
FOXA1-205ENST00000557418 CDKN2A-AS1Q9UH64 79 aa13.69□□□□□ -0.22
FOXA1-205ENST00000557418 VPS13BQ7Z7G8 4022 aa13.68□□□□□ -0.22
FOXA1-205ENST00000557418 ZNF22P17026 224 aaPredicted RBP13.67□□□□□ -0.22
FOXA1-205ENST00000557418 PET117Q6UWS5 81 aa13.67□□□□□ -0.22
FOXA1-205ENST00000557418 LINC01561Q8N1V8 128 aa13.67□□□□□ -0.22
FOXA1-205ENST00000557418 KRTDAPP60985 99 aa13.66□□□□□ -0.22
FOXA1-205ENST00000557418 LINC01545Q5VT33 79 aa13.66□□□□□ -0.22
FOXA1-205ENST00000557418 LINC00469Q8N7U9 141 aa13.66□□□□□ -0.22
FOXA1-205ENST00000557418 IGHV1-58A0A0C4DH39 117 aa13.65□□□□□ -0.22
FOXA1-205ENST00000557418 PMCHL2Q9BQD1 86 aa13.65□□□□□ -0.22
FOXA1-205ENST00000557418 MALP21145 153 aa13.64□□□□□ -0.23
FOXA1-205ENST00000557418 CFAP161Q6P656 301 aa13.64□□□□□ -0.23
FOXA1-205ENST00000557418 SCXQ7RTU7 201 aa13.64□□□□□ -0.23
FOXA1-205ENST00000557418 IGHV3-64A0A075B6Q5 118 aa13.63□□□□□ -0.23
FOXA1-205ENST00000557418 GVQW2A0A096LPI5 108 aaPredicted RBP13.63□□□□□ -0.23
FOXA1-205ENST00000557418 PLA2G1BP04054 148 aaKnown RBP13.63□□□□□ -0.23
FOXA1-205ENST00000557418 SRRM2Q9UQ35 2752 aaKnown RBP13.62□□□□□ -0.23
FOXA1-205ENST00000557418 SMIM1B2RUZ4 78 aa13.62□□□□□ -0.23
FOXA1-205ENST00000557418 LINC00528Q8N1L1 170 aa13.62□□□□□ -0.23
FOXA1-205ENST00000557418 DPM2O94777 84 aa13.61□□□□□ -0.23
FOXA1-205ENST00000557418 APOMO95445 188 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms