RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MALP21145 153 aa8.07□□□□□ -1.12
SLIRP-209ENST00000557342 HAMPP81172 84 aa8.07□□□□□ -1.12
SLIRP-209ENST00000557342 COA6Q5JTJ3 125 aaKnown RBP8.07□□□□□ -1.12
SLIRP-209ENST00000557342 PRSS3P2Q8NHM4 247 aa8.07□□□□□ -1.12
SLIRP-209ENST00000557342 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
SLIRP-209ENST00000557342 TMEM141Q96I45 108 aa8.07□□□□□ -1.12
SLIRP-209ENST00000557342 IFITM10A6NMD0 228 aa8.06□□□□□ -1.12
SLIRP-209ENST00000557342 APOMO95445 188 aa8.06□□□□□ -1.12
SLIRP-209ENST00000557342 SLPIP03973 132 aa8.06□□□□□ -1.12
SLIRP-209ENST00000557342 Q6ZN92 141 aa8.06□□□□□ -1.12
SLIRP-209ENST00000557342 OPRPNQ99935 248 aaPredicted RBP8.06□□□□□ -1.12
SLIRP-209ENST00000557342 CHAC1Q9BUX1 264 aa8.06□□□□□ -1.12
SLIRP-209ENST00000557342 TMA7Q9Y2S6 64 aaKnown RBP8.06□□□□□ -1.12
SLIRP-209ENST00000557342 IGLV4-3A0A075B6K6 122 aa8.05□□□□□ -1.12
SLIRP-209ENST00000557342 LINC01549A6NIU2 74 aa8.05□□□□□ -1.12
SLIRP-209ENST00000557342 FAM229AH3BQW9 127 aa8.05□□□□□ -1.12
SLIRP-209ENST00000557342 ZNF561-AS1K7EIQ3 104 aa8.05□□□□□ -1.12
SLIRP-209ENST00000557342 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
SLIRP-209ENST00000557342 TEX43Q6ZNM6 134 aa8.05□□□□□ -1.12
SLIRP-209ENST00000557342 SDIM1Q6ZPB5 146 aa8.05□□□□□ -1.12
SLIRP-209ENST00000557342 C2orf88Q9BSF0 95 aa8.05□□□□□ -1.12
SLIRP-209ENST00000557342 KRTAP4-5Q9BYR2 181 aa8.05□□□□□ -1.12
SLIRP-209ENST00000557342 PAPPA-AS1Q5QFB9 102 aa8.04□□□□□ -1.12
SLIRP-209ENST00000557342 Q5VSD8 79 aa8.04□□□□□ -1.12
SLIRP-209ENST00000557342 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
SLIRP-209ENST00000557342 PKIGQ9Y2B9 76 aa8.04□□□□□ -1.12
SLIRP-209ENST00000557342 LINC01546A6NGU7 62 aa8.03□□□□□ -1.12
SLIRP-209ENST00000557342 IGIPA6NJ69 53 aa8.03□□□□□ -1.12
SLIRP-209ENST00000557342 S100A6P06703 90 aa8.03□□□□□ -1.12
SLIRP-209ENST00000557342 FA2HQ7L5A8 372 aa8.03□□□□□ -1.12
SLIRP-209ENST00000557342 C5orf38Q86SI9 138 aa8.03□□□□□ -1.12
SLIRP-209ENST00000557342 BAGE3Q86Y29 109 aa8.03□□□□□ -1.12
SLIRP-209ENST00000557342 CIRBP-AS1Q8TBR5 109 aa8.03□□□□□ -1.12
SLIRP-209ENST00000557342 TOMM6Q96B49 74 aa8.03□□□□□ -1.12
SLIRP-209ENST00000557342 VCX2Q9H322 139 aa8.03□□□□□ -1.12
SLIRP-209ENST00000557342 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
SLIRP-209ENST00000557342 NDUFA6P56556 154 aa8.02□□□□□ -1.13
SLIRP-209ENST00000557342 LINC00310P59036 64 aa8.02□□□□□ -1.13
SLIRP-209ENST00000557342 CHCHD1Q96BP2 118 aaKnown RBP8.02□□□□□ -1.13
SLIRP-209ENST00000557342 URB1-AS1Q96HZ7 61 aa8.02□□□□□ -1.13
SLIRP-209ENST00000557342 AMELXQ99217 191 aa8.02□□□□□ -1.13
SLIRP-209ENST00000557342 TIMM17AQ99595 171 aa8.02□□□□□ -1.13
SLIRP-209ENST00000557342 SERF1AO75920 110 aa8.01□□□□□ -1.13
SLIRP-209ENST00000557342 UBE2D1P51668 147 aa8.01□□□□□ -1.13
SLIRP-209ENST00000557342 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
SLIRP-209ENST00000557342 ERASQ7Z444 233 aa8.01□□□□□ -1.13
SLIRP-209ENST00000557342 OR10D4PQ8NGN7 298 aa8.01□□□□□ -1.13
SLIRP-209ENST00000557342 CARD19Q96LW7 228 aa8.01□□□□□ -1.13
SLIRP-209ENST00000557342 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
SLIRP-209ENST00000557342 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
SLIRP-209ENST00000557342 DNAH8Q96JB1 4490 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 IGLV4-69A0A075B6H9 119 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 C5orf52A6NGY3 159 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 PLA2G1BP04054 148 aaKnown RBP8□□□□□ -1.13
SLIRP-209ENST00000557342 LINC00614P0C842 121 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 COX6A2Q02221 97 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
SLIRP-209ENST00000557342 LINC00242Q5T6M2 205 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 LINC00528Q8N1L1 170 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 LINC00526Q96FQ7 95 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 DPH3Q96FX2 82 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 C2orf48Q96LS8 159 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
SLIRP-209ENST00000557342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8□□□□□ -1.13
SLIRP-209ENST00000557342 F8WDY8 70 aa7.99□□□□□ -1.13
SLIRP-209ENST00000557342 SEC11AP67812 179 aa7.99□□□□□ -1.13
SLIRP-209ENST00000557342 SPAG11BQ08648 103 aa7.99□□□□□ -1.13
SLIRP-209ENST00000557342 LINC00173Q6ZV60 143 aa7.99□□□□□ -1.13
SLIRP-209ENST00000557342 ORAOV1Q8WV07 137 aa7.99□□□□□ -1.13
SLIRP-209ENST00000557342 CAMK2N2Q96S95 79 aa7.99□□□□□ -1.13
SLIRP-209ENST00000557342 A0A087WZ39 114 aa7.98□□□□□ -1.13
SLIRP-209ENST00000557342 SNRPEP62304 92 aaKnown RBP7.98□□□□□ -1.13
SLIRP-209ENST00000557342 FAM19A3Q7Z5A8 133 aa7.98□□□□□ -1.13
SLIRP-209ENST00000557342 LINC01561Q8N1V8 128 aa7.98□□□□□ -1.13
SLIRP-209ENST00000557342 HIST3H2BBQ8N257 126 aa7.98□□□□□ -1.13
SLIRP-209ENST00000557342 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
SLIRP-209ENST00000557342 PANO1I0J062 215 aa7.97□□□□□ -1.13
SLIRP-209ENST00000557342 NUPR1O60356 82 aa7.97□□□□□ -1.13
SLIRP-209ENST00000557342 HSBP1O75506 76 aa7.97□□□□□ -1.13
SLIRP-209ENST00000557342 ZC2HC1BQ5TFG8 222 aa7.97□□□□□ -1.13
SLIRP-209ENST00000557342 SPACA4Q8TDM5 124 aa7.97□□□□□ -1.13
SLIRP-209ENST00000557342 PACRGQ96M98 296 aaPredicted RBP7.97□□□□□ -1.13
SLIRP-209ENST00000557342 CHTF8P0CG12 524 aa7.96□□□□□ -1.14
SLIRP-209ENST00000557342 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
SLIRP-209ENST00000557342 HERVK_113P63121 156 aa7.96□□□□□ -1.14
SLIRP-209ENST00000557342 Q6ZRU5 148 aa7.96□□□□□ -1.14
SLIRP-209ENST00000557342 A0A087WYN8 130 aa7.95□□□□□ -1.14
SLIRP-209ENST00000557342 IGKV2-24A0A0C4DH68 120 aa7.95□□□□□ -1.14
SLIRP-209ENST00000557342 LOC107984640A0A0U1RRK4 108 aa7.95□□□□□ -1.14
SLIRP-209ENST00000557342 NDUFA1O15239 70 aa7.95□□□□□ -1.14
SLIRP-209ENST00000557342 RNF151Q2KHN1 245 aa7.95□□□□□ -1.14
SLIRP-209ENST00000557342 MAJINQ3KP22 176 aa7.95□□□□□ -1.14
SLIRP-209ENST00000557342 GEMIN7Q9H840 131 aaKnown RBP7.95□□□□□ -1.14
SLIRP-209ENST00000557342 ABCA13Q86UQ4 5058 aa7.94□□□□□ -1.14
SLIRP-209ENST00000557342 A0A096LNI7 61 aa7.94□□□□□ -1.14
SLIRP-209ENST00000557342 A0A096LNJ9 63 aa7.94□□□□□ -1.14
SLIRP-209ENST00000557342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.94□□□□□ -1.14
SLIRP-209ENST00000557342 HBDP02042 147 aa7.94□□□□□ -1.14
SLIRP-209ENST00000557342 S100A2P29034 98 aa7.94□□□□□ -1.14
SLIRP-209ENST00000557342 PMVKQ15126 192 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms