RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 NAT8BQ9UHF3 227 aa11.08□□□□□ -0.64
VIPAS39-209ENST00000556909 A0A087WZ39 114 aa11.07□□□□□ -0.64
VIPAS39-209ENST00000556909 NDUFA1O15239 70 aa11.07□□□□□ -0.64
VIPAS39-209ENST00000556909 TRBV24-1A0A075B6N3 115 aa11.06□□□□□ -0.64
VIPAS39-209ENST00000556909 TLX1NBP0CAT3 122 aa11.06□□□□□ -0.64
VIPAS39-209ENST00000556909 RPL32P62910 135 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-209ENST00000556909 FAM19A5Q7Z5A7 132 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-209ENST00000556909 SPANXA1Q9NS26 97 aa11.06□□□□□ -0.64
VIPAS39-209ENST00000556909 LINC00862A6NCI5 91 aa11.05□□□□□ -0.64
VIPAS39-209ENST00000556909 TCAPO15273 167 aa11.05□□□□□ -0.64
VIPAS39-209ENST00000556909 FAM74A3Q4VXF1 159 aa11.05□□□□□ -0.64
VIPAS39-209ENST00000556909 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
VIPAS39-209ENST00000556909 SMIM2Q9BVW6 85 aa11.05□□□□□ -0.64
VIPAS39-209ENST00000556909 C6orf48Q9UBA6 75 aa11.05□□□□□ -0.64
VIPAS39-209ENST00000556909 IFITM10A6NMD0 228 aa11.04□□□□□ -0.64
VIPAS39-209ENST00000556909 CKS2P33552 79 aa11.04□□□□□ -0.64
VIPAS39-209ENST00000556909 MRPS36P82909 103 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-209ENST00000556909 TNFRSF6BO95407 300 aa11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 KRTAP1-4P0C5Y4 121 aa11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 HBBP68871 147 aa11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 TMEM241Q24JQ0 296 aa11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 GAGE2EQ4V326 116 aa11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 AKAP14Q86UN6 197 aa11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 KRTAP7-1Q8IUC3 87 aa11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 SMDT1Q9H4I9 107 aa11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 GAGE2DQ9UEU5 116 aa11.03□□□□□ -0.64
VIPAS39-209ENST00000556909 IGLV1-50A0A075B6I6 118 aa11.02□□□□□ -0.65
VIPAS39-209ENST00000556909 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.65
VIPAS39-209ENST00000556909 A0A1B0GW15 77 aa11.01□□□□□ -0.65
VIPAS39-209ENST00000556909 ADIRFQ15847 76 aa11.01□□□□□ -0.65
VIPAS39-209ENST00000556909 D6R8Y8 96 aa11□□□□□ -0.65
VIPAS39-209ENST00000556909 M0QXV9 152 aa11□□□□□ -0.65
VIPAS39-209ENST00000556909 MUC2Q02817 5179 aa11□□□□□ -0.65
VIPAS39-209ENST00000556909 TGIF2-C20orf24A0A0A6YYL0 155 aa10.99□□□□□ -0.65
VIPAS39-209ENST00000556909 NPYP01303 97 aa10.99□□□□□ -0.65
VIPAS39-209ENST00000556909 KIAA0087Q14695 138 aa10.99□□□□□ -0.65
VIPAS39-209ENST00000556909 UBE2BP63146 152 aa10.98□□□□□ -0.65
VIPAS39-209ENST00000556909 UBE2D1P51668 147 aa10.97□□□□□ -0.65
VIPAS39-209ENST00000556909 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-209ENST00000556909 NAT8Q9UHE5 227 aa10.97□□□□□ -0.65
VIPAS39-209ENST00000556909 TRBV30A0A0K0K1B3 111 aa10.96□□□□□ -0.65
VIPAS39-209ENST00000556909 A0A1B0GXF2 115 aa10.96□□□□□ -0.65
VIPAS39-209ENST00000556909 C9JQL5 133 aa10.96□□□□□ -0.65
VIPAS39-209ENST00000556909 IFI27P40305 119 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-209ENST00000556909 C9orf129Q5T035 196 aaKnown RBP10.96□□□□□ -0.65
VIPAS39-209ENST00000556909 LINC00242Q5T6M2 205 aa10.96□□□□□ -0.65
VIPAS39-209ENST00000556909 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
VIPAS39-209ENST00000556909 hCG_2014768A0A024R1R8 64 aa10.95□□□□□ -0.66
VIPAS39-209ENST00000556909 IGLV4-3A0A075B6K6 122 aa10.95□□□□□ -0.66
VIPAS39-209ENST00000556909 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
VIPAS39-209ENST00000556909 F8W036 122 aa10.95□□□□□ -0.66
VIPAS39-209ENST00000556909 S100A8P05109 93 aa10.95□□□□□ -0.66
VIPAS39-209ENST00000556909 PPBPP02775 128 aa10.94□□□□□ -0.66
VIPAS39-209ENST00000556909 RPL13AP40429 203 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-209ENST00000556909 PRR4Q16378 134 aa10.94□□□□□ -0.66
VIPAS39-209ENST00000556909 PYGO1Q9Y3Y4 419 aa10.94□□□□□ -0.66
VIPAS39-209ENST00000556909 ORMDL3Q8N138 153 aa10.92□□□□□ -0.66
VIPAS39-209ENST00000556909 TMEM141Q96I45 108 aa10.92□□□□□ -0.66
VIPAS39-209ENST00000556909 PACRGQ96M98 296 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-209ENST00000556909 RAB5AP20339 215 aa10.91□□□□□ -0.66
VIPAS39-209ENST00000556909 SRSF3P84103 164 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-209ENST00000556909 LINC01561Q8N1V8 128 aa10.9□□□□□ -0.66
VIPAS39-209ENST00000556909 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-209ENST00000556909 TEX43Q6ZNM6 134 aa10.89□□□□□ -0.67
VIPAS39-209ENST00000556909 PRELID3AQ96N28 172 aa10.89□□□□□ -0.67
VIPAS39-209ENST00000556909 ZNF861PO60384 105 aa10.88□□□□□ -0.67
VIPAS39-209ENST00000556909 TMEM136Q6ZRR5 245 aa10.88□□□□□ -0.67
VIPAS39-209ENST00000556909 C2orf88Q9BSF0 95 aa10.88□□□□□ -0.67
VIPAS39-209ENST00000556909 PEA15Q15121 130 aa10.87□□□□□ -0.67
VIPAS39-209ENST00000556909 ZC2HC1BQ5TFG8 222 aa10.87□□□□□ -0.67
VIPAS39-209ENST00000556909 LINC00173Q6ZV60 143 aa10.87□□□□□ -0.67
VIPAS39-209ENST00000556909 ATP5L2Q7Z4Y8 100 aa10.86□□□□□ -0.67
VIPAS39-209ENST00000556909 LINC00469Q8N7U9 141 aa10.86□□□□□ -0.67
VIPAS39-209ENST00000556909 LOC389332A0A1B0GUA5 103 aa10.85□□□□□ -0.67
VIPAS39-209ENST00000556909 NUPR1O60356 82 aa10.85□□□□□ -0.67
VIPAS39-209ENST00000556909 PRSS2P07478 247 aa10.85□□□□□ -0.67
VIPAS39-209ENST00000556909 AMELXQ99217 191 aa10.85□□□□□ -0.67
VIPAS39-209ENST00000556909 TOMM7Q9P0U1 55 aa10.85□□□□□ -0.67
VIPAS39-209ENST00000556909 C22orf24Q9Y442 160 aa10.85□□□□□ -0.67
VIPAS39-209ENST00000556909 PRSS47A8MTI9 375 aa10.84□□□□□ -0.67
VIPAS39-209ENST00000556909 CKS1BP61024 79 aa10.84□□□□□ -0.67
VIPAS39-209ENST00000556909 Q6ZN92 141 aa10.84□□□□□ -0.67
VIPAS39-209ENST00000556909 MAP1LC3AQ9H492 121 aa10.84□□□□□ -0.67
VIPAS39-209ENST00000556909 CYSLTR1Q9Y271 337 aa10.84□□□□□ -0.67
VIPAS39-209ENST00000556909 C2orf66Q6UXQ4 117 aa10.83□□□□□ -0.68
VIPAS39-209ENST00000556909 Q8IZM0 81 aa10.83□□□□□ -0.68
VIPAS39-209ENST00000556909 XAGE1AQ9HD64 81 aa10.83□□□□□ -0.68
VIPAS39-209ENST00000556909 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.68
VIPAS39-209ENST00000556909 TSPAN13O95857 204 aa10.82□□□□□ -0.68
VIPAS39-209ENST00000556909 CTDSP1Q9GZU7 261 aa10.82□□□□□ -0.68
VIPAS39-209ENST00000556909 A0A087X002 238 aa10.81□□□□□ -0.68
VIPAS39-209ENST00000556909 LBHQ53QV2 105 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-209ENST00000556909 C6orf226Q5I0X4 101 aa10.81□□□□□ -0.68
VIPAS39-209ENST00000556909 FAM19A3Q7Z5A8 133 aa10.81□□□□□ -0.68
VIPAS39-209ENST00000556909 Q8N8P6 123 aa10.81□□□□□ -0.68
VIPAS39-209ENST00000556909 VCX2Q9H322 139 aa10.81□□□□□ -0.68
VIPAS39-209ENST00000556909 A0A0U1RQV1 116 aa10.8□□□□□ -0.68
VIPAS39-209ENST00000556909 ALKBH7Q9BT30 221 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-209ENST00000556909 IGIPA6NJ69 53 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms