RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 BTG2P78543 158 aa-0.45□□□□□ -2.48
LINC00871-203ENST00000556869 FDCSPQ8NFU4 85 aa-0.45□□□□□ -2.48
LINC00871-203ENST00000556869 TMEM263Q8WUH6 116 aaKnown RBP-0.45□□□□□ -2.48
LINC00871-203ENST00000556869 NXT2Q9NPJ8 142 aaKnown RBP-0.45□□□□□ -2.48
LINC00871-203ENST00000556869 NSD3Q9BZ95 1437 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 LOC100130705A0A1B0GUX0 176 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 SYS1-DBNDD2H3BUS1 97 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 IGLC1P0CG04 106 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 KLK9Q2XQG4 91 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 C10orf113Q5VZT2 155 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 DEFB105AQ8NG35 78 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 LINC00474Q9P2X8 69 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 CHD8Q9HCK8 2581 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 DCHS2Q6V1P9 2916 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 SHROOM2Q13796 1616 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 KTN1Q86UP2 1357 aaKnown RBP-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 DNAJC13O75165 2243 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 ROBO1Q9Y6N7 1651 aa-0.46□□□□□ -2.48
LINC00871-203ENST00000556869 BSNQ9UPA5 3926 aa-0.47□□□□□ -2.48
LINC00871-203ENST00000556869 ARHGEF5Q12774 1597 aa-0.47□□□□□ -2.48
LINC00871-203ENST00000556869 AKAIN1P0CW23 69 aa-0.47□□□□□ -2.48
LINC00871-203ENST00000556869 WHAMMP3Q1A5X7 153 aa-0.47□□□□□ -2.48
LINC00871-203ENST00000556869 FAM223AQ8IWN6 122 aa-0.47□□□□□ -2.48
LINC00871-203ENST00000556869 ARL2-SNX15V9GYD0 113 aa-0.47□□□□□ -2.48
LINC00871-203ENST00000556869 FLNBO75369 2602 aaKnown RBP-0.47□□□□□ -2.48
LINC00871-203ENST00000556869 MAGI1Q96QZ7 1491 aaPredicted RBP-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 TULP4Q9NRJ4 1543 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 CNOT1A5YKK6 2376 aaKnown RBP-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 LINC00959A0A1B0GUT2 108 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 OOSP1A8MZH6 123 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 M0R2T5 61 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 COX8AP10176 69 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 GNG11P61952 73 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 S100A12P80511 92 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 C9orf153Q5TBE3 101 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 CDC42SE2Q9NRR3 84 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 SMG6Q86US8 1419 aaKnown RBP-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 IQSEC2Q5JU85 1478 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 LRP1BQ9NZR2 4599 aa-0.48□□□□□ -2.49
LINC00871-203ENST00000556869 PIEZO2Q9H5I5 2752 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 QRICH2Q9H0J4 1663 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 UBE2L5PA0A1B0GUS4 154 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 K7EP13 123 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 UBE2L3P68036 154 aaKnown RBP-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 C1orf54Q8WWF1 131 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 LINC01600Q96MT4 127 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 SPRR4Q96PI1 79 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 PRO1933Q9H354 126 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 MANBALQ9NQG1 85 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 ATRQ13535 2644 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 SETBP1Q9Y6X0 1596 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 KIAA0556O60303 1618 aa-0.49□□□□□ -2.49
LINC00871-203ENST00000556869 FAM24AA6NFZ4 105 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 SNAPC5O75971 98 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 PP6455Q8WZ26 134 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 USMG5Q96IX5 58 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 A2ML1A8K2U0 1454 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 HMGXB3Q12766 1538 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 EHBP1L1Q8N3D4 1523 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 COL6A3P12111 3177 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 TET3O43151 1660 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 CUL7Q14999 1698 aa-0.5□□□□□ -2.49
LINC00871-203ENST00000556869 A0A1B0GWA3 101 aa-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 F6UZH7 168 aa-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 HMGN1P05114 100 aa-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 TRAPPC2P0DI81 140 aa-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 TRAPPC2BP0DI82 140 aa-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 ATP5EP56381 51 aaPredicted RBP-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 Q0VG73 95 aa-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 SFTA2Q6UW10 78 aa-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 FAM167A-AS1Q96KT0 104 aa-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 TENM2Q9NT68 2774 aa-0.51□□□□□ -2.49
LINC00871-203ENST00000556869 SCN7AQ01118 1682 aa-0.52□□□□□ -2.49
LINC00871-203ENST00000556869 C1orf167Q5SNV9 1468 aa-0.52□□□□□ -2.49
LINC00871-203ENST00000556869 ROCK2O75116 1388 aaKnown RBP-0.52□□□□□ -2.49
LINC00871-203ENST00000556869 LCN9Q8WX39 176 aa-0.52□□□□□ -2.49
LINC00871-203ENST00000556869 DPH3P1Q9H4G8 78 aa-0.52□□□□□ -2.49
LINC00871-203ENST00000556869 APLNQ9ULZ1 77 aa-0.52□□□□□ -2.49
LINC00871-203ENST00000556869 FMN2Q9NZ56 1722 aa-0.52□□□□□ -2.49
LINC00871-203ENST00000556869 TOP2BQ02880 1626 aa-0.53□□□□□ -2.49
LINC00871-203ENST00000556869 SCAPERQ9BY12 1400 aa-0.53□□□□□ -2.49
LINC00871-203ENST00000556869 FAM223BA6NKX1 122 aa-0.53□□□□□ -2.49
LINC00871-203ENST00000556869 COX6CP09669 75 aa-0.53□□□□□ -2.49
LINC00871-203ENST00000556869 A0A0G2JMZ2 1700 aa-0.53□□□□□ -2.49
LINC00871-203ENST00000556869 MYOM2P54296 1465 aa-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 NUP188Q5SRE5 1749 aa-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 XRN1Q8IZH2 1706 aaKnown RBP-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 NAP1L6A6NFF2 107 aa-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 CPSF4LA6NMK7 179 aaKnown RBP-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 SEC11AP67812 179 aa-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 SVBPQ8N300 66 aa-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 C12orf57Q99622 126 aa-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 PRO1854Q9UHT4 67 aa-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 SETXQ7Z333 2677 aaKnown RBP-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 ADGRL2O95490 1459 aa-0.54□□□□□ -2.5
LINC00871-203ENST00000556869 NALCNQ8IZF0 1738 aa-0.55□□□□□ -2.5
LINC00871-203ENST00000556869 PCNX1Q96RV3 2341 aa-0.55□□□□□ -2.5
LINC00871-203ENST00000556869 UBE2D3P61077 147 aa-0.55□□□□□ -2.5
LINC00871-203ENST00000556869 UBE2D2P62837 147 aa-0.55□□□□□ -2.5
LINC00871-203ENST00000556869 RPL13AP3Q6NVV1 102 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms