RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 AMELXQ99217 191 aa14.65□□□□□ -0.06
PABPN1-206ENST00000556809 C2orf88Q9BSF0 95 aa14.65□□□□□ -0.06
PABPN1-206ENST00000556809 FAM30AQ9NZY2 134 aa14.65□□□□□ -0.06
PABPN1-206ENST00000556809 A0A096LNJ9 63 aa14.63□□□□□ -0.07
PABPN1-206ENST00000556809 hDV102S1A0JD36 115 aa14.63□□□□□ -0.07
PABPN1-206ENST00000556809 ZC2HC1BQ5TFG8 222 aa14.63□□□□□ -0.07
PABPN1-206ENST00000556809 COX7A2LO14548 114 aa14.62□□□□□ -0.07
PABPN1-206ENST00000556809 HBDP02042 147 aa14.62□□□□□ -0.07
PABPN1-206ENST00000556809 PMCHL1Q16048 86 aa14.62□□□□□ -0.07
PABPN1-206ENST00000556809 Q6ZSA8 131 aa14.62□□□□□ -0.07
PABPN1-206ENST00000556809 CHCHD1Q96BP2 118 aaKnown RBP14.62□□□□□ -0.07
PABPN1-206ENST00000556809 UBE2D1P51668 147 aa14.61□□□□□ -0.07
PABPN1-206ENST00000556809 BAGE3Q86Y29 109 aa14.61□□□□□ -0.07
PABPN1-206ENST00000556809 FAT1Q14517 4588 aa14.61□□□□□ -0.07
PABPN1-206ENST00000556809 GVQW2A0A096LPI5 108 aaPredicted RBP14.6□□□□□ -0.07
PABPN1-206ENST00000556809 IGHV1-58A0A0C4DH39 117 aa14.6□□□□□ -0.07
PABPN1-206ENST00000556809 LINC01620Q4KN68 170 aa14.6□□□□□ -0.07
PABPN1-206ENST00000556809 LINC00242Q5T6M2 205 aa14.6□□□□□ -0.07
PABPN1-206ENST00000556809 IGHV3OR16-9A0A0B4J2B5 98 aa14.59□□□□□ -0.07
PABPN1-206ENST00000556809 MALP21145 153 aa14.59□□□□□ -0.07
PABPN1-206ENST00000556809 HAMPP81172 84 aa14.59□□□□□ -0.07
PABPN1-206ENST00000556809 HIGD2BQ4VC39 106 aa14.59□□□□□ -0.07
PABPN1-206ENST00000556809 C5orf38Q86SI9 138 aa14.59□□□□□ -0.07
PABPN1-206ENST00000556809 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.57□□□□□ -0.08
PABPN1-206ENST00000556809 PDZD11Q5EBL8 140 aa14.57□□□□□ -0.08
PABPN1-206ENST00000556809 CNBPP62633 177 aaKnown RBP14.56□□□□□ -0.08
PABPN1-206ENST00000556809 EPM2AB3EWF7 344 aa14.55□□□□□ -0.08
PABPN1-206ENST00000556809 HSBP1O75506 76 aa14.55□□□□□ -0.08
PABPN1-206ENST00000556809 SMR3BP02814 79 aaPredicted RBP14.55□□□□□ -0.08
PABPN1-206ENST00000556809 COX6A2Q02221 97 aa14.55□□□□□ -0.08
PABPN1-206ENST00000556809 FAM19A3Q7Z5A8 133 aa14.55□□□□□ -0.08
PABPN1-206ENST00000556809 APOMO95445 188 aa14.54□□□□□ -0.08
PABPN1-206ENST00000556809 SLPIP03973 132 aa14.54□□□□□ -0.08
PABPN1-206ENST00000556809 VPS13BQ7Z7G8 4022 aa14.53□□□□□ -0.08
PABPN1-206ENST00000556809 SERF1AO75920 110 aa14.53□□□□□ -0.08
PABPN1-206ENST00000556809 ATP5LO75964 103 aa14.53□□□□□ -0.08
PABPN1-206ENST00000556809 SEC11AP67812 179 aa14.53□□□□□ -0.08
PABPN1-206ENST00000556809 PMVKQ15126 192 aa14.53□□□□□ -0.08
PABPN1-206ENST00000556809 C9orf163Q8N9P6 203 aa14.53□□□□□ -0.08
PABPN1-206ENST00000556809 CST9LQ9H4G1 147 aa14.53□□□□□ -0.08
PABPN1-206ENST00000556809 A0A087WZ39 114 aa14.52□□□□□ -0.09
PABPN1-206ENST00000556809 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.52□□□□□ -0.09
PABPN1-206ENST00000556809 ZNF561-AS1K7EIQ3 104 aa14.52□□□□□ -0.09
PABPN1-206ENST00000556809 LINC00310P59036 64 aa14.52□□□□□ -0.09
PABPN1-206ENST00000556809 HERVK_113P63121 156 aa14.51□□□□□ -0.09
PABPN1-206ENST00000556809 Q5VSD8 79 aa14.51□□□□□ -0.09
PABPN1-206ENST00000556809 LINC00526Q96FQ7 95 aa14.51□□□□□ -0.09
PABPN1-206ENST00000556809 IGHV3-64A0A075B6Q5 118 aa14.5□□□□□ -0.09
PABPN1-206ENST00000556809 A0A0J9YXV3 536 aa14.5□□□□□ -0.09
PABPN1-206ENST00000556809 FAM19A2Q8N3H0 131 aa14.5□□□□□ -0.09
PABPN1-206ENST00000556809 GEMIN7Q9H840 131 aaKnown RBP14.5□□□□□ -0.09
PABPN1-206ENST00000556809 HIST1H2BKO60814 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST1H2BJP06899 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST1H2BOP23527 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST1H2BBP33778 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST1H2BDP58876 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST1H2BCP62807 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST2H2BEQ16778 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.49□□□□□ -0.09
PABPN1-206ENST00000556809 OR10D4PQ8NGN7 298 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 ORAOV1Q8WV07 137 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST1H2BHQ93079 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST1H2BNQ99877 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 HIST1H2BMQ99879 126 aa14.49□□□□□ -0.09
PABPN1-206ENST00000556809 IGLV4-69A0A075B6H9 119 aa14.48□□□□□ -0.09
PABPN1-206ENST00000556809 NDUFA6P56556 154 aa14.48□□□□□ -0.09
PABPN1-206ENST00000556809 SPAG11BQ08648 103 aa14.48□□□□□ -0.09
PABPN1-206ENST00000556809 LINC01561Q8N1V8 128 aa14.48□□□□□ -0.09
PABPN1-206ENST00000556809 TINCRA0A1B0GVN0 87 aa14.47□□□□□ -0.09
PABPN1-206ENST00000556809 SCXQ7RTU7 201 aa14.47□□□□□ -0.09
PABPN1-206ENST00000556809 NUPR1O60356 82 aa14.46□□□□□ -0.09
PABPN1-206ENST00000556809 CHAC1Q9BUX1 264 aa14.46□□□□□ -0.09
PABPN1-206ENST00000556809 CDKN2A-AS1Q9UH64 79 aa14.46□□□□□ -0.09
PABPN1-206ENST00000556809 IFI27L1Q96BM0 104 aa14.45□□□□□ -0.1
PABPN1-206ENST00000556809 C2orf48Q96LS8 159 aa14.45□□□□□ -0.1
PABPN1-206ENST00000556809 SYCNQ0VAF6 134 aa14.44□□□□□ -0.1
PABPN1-206ENST00000556809 LINC00469Q8N7U9 141 aa14.44□□□□□ -0.1
PABPN1-206ENST00000556809 CARD19Q96LW7 228 aa14.44□□□□□ -0.1
PABPN1-206ENST00000556809 IGLV5-45A0A087WSX0 123 aa14.43□□□□□ -0.1
PABPN1-206ENST00000556809 FAM229AH3BQW9 127 aa14.43□□□□□ -0.1
PABPN1-206ENST00000556809 SDIM1Q6ZPB5 146 aa14.43□□□□□ -0.1
PABPN1-206ENST00000556809 CIRBP-AS1Q8TBR5 109 aa14.43□□□□□ -0.1
PABPN1-206ENST00000556809 CAMK2N2Q96S95 79 aa14.43□□□□□ -0.1
PABPN1-206ENST00000556809 LEPROTL1O95214 131 aa14.42□□□□□ -0.1
PABPN1-206ENST00000556809 IGLC3P0DOY3 106 aa14.42□□□□□ -0.1
PABPN1-206ENST00000556809 PACRGQ96M98 296 aaPredicted RBP14.42□□□□□ -0.1
PABPN1-206ENST00000556809 Q6ZRU5 148 aa14.4□□□□□ -0.1
PABPN1-206ENST00000556809 TRAV12-1A0A0B4J245 112 aa14.39□□□□□ -0.11
PABPN1-206ENST00000556809 F8WDY8 70 aa14.39□□□□□ -0.11
PABPN1-206ENST00000556809 KIAA0087Q14695 138 aa14.39□□□□□ -0.11
PABPN1-206ENST00000556809 PANO1I0J062 215 aa14.38□□□□□ -0.11
PABPN1-206ENST00000556809 INAFM2P0DMQ5 153 aa14.38□□□□□ -0.11
PABPN1-206ENST00000556809 LINC00528Q8N1L1 170 aa14.38□□□□□ -0.11
PABPN1-206ENST00000556809 HSPB8Q9UJY1 196 aa14.38□□□□□ -0.11
PABPN1-206ENST00000556809 CHTOPQ9Y3Y2 248 aaKnown RBP14.38□□□□□ -0.11
PABPN1-206ENST00000556809 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.38□□□□□ -0.11
PABPN1-206ENST00000556809 SRRM2Q9UQ35 2752 aaKnown RBP14.38□□□□□ -0.11
PABPN1-206ENST00000556809 SMIM1B2RUZ4 78 aa14.37□□□□□ -0.11
PABPN1-206ENST00000556809 NDUFA1O15239 70 aa14.37□□□□□ -0.11
PABPN1-206ENST00000556809 TOMM7Q9P0U1 55 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms