RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 H0YGG7 62 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 H7BZZ5 65 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 EFNA4P52798 201 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 Q8NAQ8 132 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 TP53AIP1Q9HCN2 124 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 FNDC1Q4ZHG4 1894 aaPredicted RBP1.22□□□□□ -2.21
KTN1-224ENST00000556631 ZNF236Q9UL36 1845 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 THADAQ6YHU6 1953 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 TNRC18O15417 2968 aaPredicted RBP1.22□□□□□ -2.21
KTN1-224ENST00000556631 PSME4Q14997 1843 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 RTL8CO15255 209 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 CCL18P55774 89 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 ADM2Q7Z4H4 148 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 LINC01558Q9Y6Z2 57 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 POLR2AP24928 1970 aaKnown RBP1.22□□□□□ -2.21
KTN1-224ENST00000556631 ZNF106Q9H2Y7 1883 aaKnown RBP1.22□□□□□ -2.21
KTN1-224ENST00000556631 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.22□□□□□ -2.21
KTN1-224ENST00000556631 TTTY12Q9BZ98 90 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 SBF1O95248 1867 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 MYO5AQ9Y4I1 1855 aaKnown RBP1.22□□□□□ -2.21
KTN1-224ENST00000556631 SCN5AQ14524 2016 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 TRBV7-4A0A0J9YYF1 115 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 A0A1W2PPR1 153 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 EPM2AB3EWF7 344 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 CCL5P13501 91 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 NTM-AS1Q6ZSK4 140 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 KIAA2026Q5HYC2 2103 aa1.22□□□□□ -2.21
KTN1-224ENST00000556631 OTOFQ9HC10 1997 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 TCHHQ07283 1943 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 KIF26BQ2KJY2 2108 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 ARHGAP32A7KAX9 2087 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 HCFC1P51610 2035 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 RALGAPA1Q6GYQ0 2036 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 A0A1B0GUV1 79 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 FREM3P0C091 2139 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 NDPQ00604 133 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 C1orf147Q96MC9 270 aaPredicted RBP1.21□□□□□ -2.22
KTN1-224ENST00000556631 DOCK5Q9H7D0 1870 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 DDX60LQ5H9U9 1706 aaKnown RBP1.21□□□□□ -2.22
KTN1-224ENST00000556631 H3BUA1 57 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 COX6A2Q02221 97 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 KPRPQ5T749 579 aaPredicted RBP1.21□□□□□ -2.22
KTN1-224ENST00000556631 VOPP1Q96AW1 172 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 CCL19Q99731 98 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 DOCK4Q8N1I0 1966 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 KRTAP24-1Q3LI83 254 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 MYO9BQ13459 2157 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 SDK2Q58EX2 2172 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 TSC2P49815 1807 aa1.21□□□□□ -2.22
KTN1-224ENST00000556631 TTC3P53804 2025 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 A0A1B0GU33 70 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 PRB3Q04118 309 aaPredicted RBP1.2□□□□□ -2.22
KTN1-224ENST00000556631 MRGPRG-AS1Q2M3A8 158 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 DEFB121Q5J5C9 76 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 CDKN2A-AS1Q9UH64 79 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 TIAM2Q8IVF5 1701 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 A6NN06 94 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 SPINK7P58062 85 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 DEFB114Q30KQ6 69 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 ZNF469Q96JG9 3925 aaPredicted RBP1.2□□□□□ -2.22
KTN1-224ENST00000556631 GREB1LQ9C091 1923 aaPredicted RBP1.2□□□□□ -2.22
KTN1-224ENST00000556631 A8MUU9 505 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 CGB3P0DN86 165 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 CGB7P0DN87 165 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 PRO3102Q9H379 93 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 LINC00846Q9NV44 126 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 MYOFQ9NZM1 2061 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 PCM1Q15154 2024 aa1.2□□□□□ -2.22
KTN1-224ENST00000556631 DENND4AQ7Z401 1863 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 SCN2AQ99250 2005 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 C9orf106Q8NAJ2 232 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 CDC42SE2Q9NRR3 84 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 R4GN34 69 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 ECM29Q5VYK3 1845 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 MDC1Q14676 2089 aaKnown RBP1.19□□□□□ -2.22
KTN1-224ENST00000556631 SCN9AQ15858 1988 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 IGLV1-51P01701 117 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 MED13Q9UHV7 2174 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 MYH7P12883 1935 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 MRC1P22897 1456 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 DLG5Q8TDM6 1919 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 HRES1P13985 223 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 LINC00575Q6W349 94 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 Q6ZRX8 168 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 WFDC10BQ8IUB3 73 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 Q8N1X5 172 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 Q8N2B8 174 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 CYYR1Q96J86 154 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 C16orf95Q9H693 158 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 C6orf48Q9UBA6 75 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 TRIP12Q14669 1992 aaPredicted RBP1.19□□□□□ -2.22
KTN1-224ENST00000556631 MPDZO75970 2070 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 KRTAP5-8O75690 187 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 TTTY10Q9BZA0 68 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 SDK1Q7Z5N4 2213 aa1.19□□□□□ -2.22
KTN1-224ENST00000556631 GAS8-AS1O95177 125 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 Q6ZPA2 131 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 LINC00308Q8TCZ7 52 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 CCL26Q9Y258 94 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms