RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TRBV10-1A0A0K0K1A3 114 aa4.18□□□□□ -1.74
ATXN3-236ENST00000556220 C5orf52A6NGY3 159 aa4.18□□□□□ -1.74
ATXN3-236ENST00000556220 H3BVH4 76 aa4.18□□□□□ -1.74
ATXN3-236ENST00000556220 P01737 135 aa4.18□□□□□ -1.74
ATXN3-236ENST00000556220 PKIAP61925 76 aa4.18□□□□□ -1.74
ATXN3-236ENST00000556220 RPL36AP83881 106 aaKnown RBP4.18□□□□□ -1.74
ATXN3-236ENST00000556220 FABP9Q0Z7S8 132 aa4.18□□□□□ -1.74
ATXN3-236ENST00000556220 LINC00269Q8N2A0 174 aa4.18□□□□□ -1.74
ATXN3-236ENST00000556220 FABP5P3A8MUU1 101 aa4.17□□□□□ -1.74
ATXN3-236ENST00000556220 PPP1R2P9O14990 202 aa4.17□□□□□ -1.74
ATXN3-236ENST00000556220 S100A4P26447 101 aaKnown RBP4.17□□□□□ -1.74
ATXN3-236ENST00000556220 SSTP61278 116 aa4.17□□□□□ -1.74
ATXN3-236ENST00000556220 COA6Q5JTJ3 125 aaKnown RBP4.17□□□□□ -1.74
ATXN3-236ENST00000556220 SAPCD1Q5SSQ6 148 aa4.17□□□□□ -1.74
ATXN3-236ENST00000556220 CLPSL2Q6UWE3 100 aa4.17□□□□□ -1.74
ATXN3-236ENST00000556220 LINC00173Q6ZV60 143 aa4.17□□□□□ -1.74
ATXN3-236ENST00000556220 AMN1Q8IY45 258 aa4.17□□□□□ -1.74
ATXN3-236ENST00000556220 CHCHD5Q9BSY4 110 aa4.17□□□□□ -1.74
ATXN3-236ENST00000556220 ALKBH7Q9BT30 221 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-236ENST00000556220 GFRA4Q9GZZ7 299 aa4.17□□□□□ -1.74
ATXN3-236ENST00000556220 IGLV10-54A0A075B6I4 117 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 TRAV9-1A0A075B6T8 112 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 NCR2O95944 276 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 NPYP01303 97 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 OR5AL1P0C617 328 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 NTF3P20783 257 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 RBX1P62877 108 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 MRPL51Q4U2R6 128 aaKnown RBP4.16□□□□□ -1.74
ATXN3-236ENST00000556220 HIST3H2BBQ8N257 126 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 PRR26Q8N8Z3 221 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 FER1L6-AS1Q8NA97 138 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 C18orf32Q8TCD1 76 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 NDFIP1Q9BT67 221 aa4.16□□□□□ -1.74
ATXN3-236ENST00000556220 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 A8MWL6 223 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 VCYO14598 125 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 RAB4AP20338 218 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 SNRPEP62304 92 aaKnown RBP4.15□□□□□ -1.75
ATXN3-236ENST00000556220 CACNG7P62955 275 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 REG3AQ06141 175 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 FAM74A4Q5TZK3 123 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 FAM104AQ969W3 186 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 BTF3L4Q96K17 158 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 GNB1LQ9BYB4 327 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 LINC00474Q9P2X8 69 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 NAT8BQ9UHF3 227 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 PAM16Q9Y3D7 125 aa4.15□□□□□ -1.75
ATXN3-236ENST00000556220 A0A096LNI7 61 aa4.14□□□□□ -1.75
ATXN3-236ENST00000556220 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
ATXN3-236ENST00000556220 K7EQM0 130 aa4.14□□□□□ -1.75
ATXN3-236ENST00000556220 HBBP68871 147 aa4.14□□□□□ -1.75
ATXN3-236ENST00000556220 GAGE6Q13070 117 aa4.14□□□□□ -1.75
ATXN3-236ENST00000556220 FAM104BQ5XKR9 115 aa4.14□□□□□ -1.75
ATXN3-236ENST00000556220 RPL39LQ96EH5 51 aaKnown RBP4.14□□□□□ -1.75
ATXN3-236ENST00000556220 SERF1AO75920 110 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 NDUFA6P56556 154 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 TMEM97Q5BJF2 176 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 PDZD11Q5EBL8 140 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 NTM-AS1Q6ZSK4 140 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 ATP5L2Q7Z4Y8 100 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 C15orf56Q8N910 161 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 NEXN-AS1Q8NBZ9 246 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 TPPP3Q9BW30 176 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 TRAPPC1Q9Y5R8 145 aa4.13□□□□□ -1.75
ATXN3-236ENST00000556220 LINC01546A6NGU7 62 aa4.12□□□□□ -1.75
ATXN3-236ENST00000556220 C1orf196B1AJZ1 125 aa4.12□□□□□ -1.75
ATXN3-236ENST00000556220 D6R8Y8 96 aa4.12□□□□□ -1.75
ATXN3-236ENST00000556220 ESDP10768 282 aa4.12□□□□□ -1.75
ATXN3-236ENST00000556220 PMCHL1Q16048 86 aa4.12□□□□□ -1.75
ATXN3-236ENST00000556220 C20orf203Q8NBC4 194 aa4.12□□□□□ -1.75
ATXN3-236ENST00000556220 TMEM18Q96B42 140 aa4.12□□□□□ -1.75
ATXN3-236ENST00000556220 HIST1H2BLQ99880 126 aa4.12□□□□□ -1.75
ATXN3-236ENST00000556220 TMEM191AQ9H0A3 160 aa4.12□□□□□ -1.75
ATXN3-236ENST00000556220 IGLV1-50A0A075B6I6 118 aa4.11□□□□□ -1.75
ATXN3-236ENST00000556220 TRBV25-1A0A075B6N4 114 aa4.11□□□□□ -1.75
ATXN3-236ENST00000556220 M0R381 172 aa4.11□□□□□ -1.75
ATXN3-236ENST00000556220 APCSP02743 223 aa4.11□□□□□ -1.75
ATXN3-236ENST00000556220 RPS20P60866 119 aaKnown RBP4.11□□□□□ -1.75
ATXN3-236ENST00000556220 RAB4BP61018 213 aa4.11□□□□□ -1.75
ATXN3-236ENST00000556220 HIGD2BQ4VC39 106 aa4.11□□□□□ -1.75
ATXN3-236ENST00000556220 RASL11AQ6T310 242 aa4.11□□□□□ -1.75
ATXN3-236ENST00000556220 FAM19A2Q8N3H0 131 aa4.11□□□□□ -1.75
ATXN3-236ENST00000556220 PHLDA3Q9Y5J5 127 aa4.11□□□□□ -1.75
ATXN3-236ENST00000556220 IGLV4-60A0A075B6I1 120 aa4.1□□□□□ -1.75
ATXN3-236ENST00000556220 A0A1B0GUV1 79 aa4.1□□□□□ -1.75
ATXN3-236ENST00000556220 XKRY2A2RUG3 117 aa4.1□□□□□ -1.75
ATXN3-236ENST00000556220 M0QY20 66 aa4.1□□□□□ -1.75
ATXN3-236ENST00000556220 S100PP25815 95 aa4.1□□□□□ -1.75
ATXN3-236ENST00000556220 IFI27P40305 119 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-236ENST00000556220 PYY3Q5JQD4 70 aa4.1□□□□□ -1.75
ATXN3-236ENST00000556220 DIRC1Q969H9 104 aa4.1□□□□□ -1.75
ATXN3-236ENST00000556220 BIN3Q9NQY0 253 aa4.1□□□□□ -1.75
ATXN3-236ENST00000556220 PKIGQ9Y2B9 76 aa4.1□□□□□ -1.75
ATXN3-236ENST00000556220 GVQW2A0A096LPI5 108 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-236ENST00000556220 IGHV1-24A0A0C4DH33 117 aa4.09□□□□□ -1.75
ATXN3-236ENST00000556220 A0A1W2PNN7 141 aa4.09□□□□□ -1.75
ATXN3-236ENST00000556220 A4D1N5 150 aa4.09□□□□□ -1.75
ATXN3-236ENST00000556220 TSHBP01222 138 aa4.09□□□□□ -1.75
ATXN3-236ENST00000556220 MT-ND6P03923 174 aa4.09□□□□□ -1.75
ATXN3-236ENST00000556220 POLR2KP53803 58 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms