RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ZNF561-AS1K7EIQ3 104 aa9.73□□□□□ -0.85
ACTN1-217ENST00000556203 Q6ZN92 141 aa9.72□□□□□ -0.85
ACTN1-217ENST00000556203 TEX43Q6ZNM6 134 aa9.72□□□□□ -0.85
ACTN1-217ENST00000556203 TRAPPC1Q9Y5R8 145 aa9.72□□□□□ -0.85
ACTN1-217ENST00000556203 IGLV4-69A0A075B6H9 119 aa9.71□□□□□ -0.86
ACTN1-217ENST00000556203 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.86
ACTN1-217ENST00000556203 IGIPA6NJ69 53 aa9.71□□□□□ -0.86
ACTN1-217ENST00000556203 APOMO95445 188 aa9.71□□□□□ -0.86
ACTN1-217ENST00000556203 CHTF8P0CG12 524 aa9.71□□□□□ -0.86
ACTN1-217ENST00000556203 G0S2P27469 103 aa9.71□□□□□ -0.86
ACTN1-217ENST00000556203 COX6A2Q02221 97 aa9.71□□□□□ -0.86
ACTN1-217ENST00000556203 CARD19Q96LW7 228 aa9.71□□□□□ -0.86
ACTN1-217ENST00000556203 C2orf88Q9BSF0 95 aa9.71□□□□□ -0.86
ACTN1-217ENST00000556203 INAFM2P0DMQ5 153 aa9.7□□□□□ -0.86
ACTN1-217ENST00000556203 SYCNQ0VAF6 134 aa9.7□□□□□ -0.86
ACTN1-217ENST00000556203 CIRBPQ14011 172 aaKnown RBP9.7□□□□□ -0.86
ACTN1-217ENST00000556203 LINC00242Q5T6M2 205 aa9.7□□□□□ -0.86
ACTN1-217ENST00000556203 ZC2HC1BQ5TFG8 222 aa9.7□□□□□ -0.86
ACTN1-217ENST00000556203 TOMM6Q96B49 74 aa9.7□□□□□ -0.86
ACTN1-217ENST00000556203 DPH3Q96FX2 82 aa9.7□□□□□ -0.86
ACTN1-217ENST00000556203 VCX2Q9H322 139 aa9.7□□□□□ -0.86
ACTN1-217ENST00000556203 PLA2G1BP04054 148 aaKnown RBP9.69□□□□□ -0.86
ACTN1-217ENST00000556203 NPSP0C0P6 89 aa9.69□□□□□ -0.86
ACTN1-217ENST00000556203 UBE2D1P51668 147 aa9.69□□□□□ -0.86
ACTN1-217ENST00000556203 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
ACTN1-217ENST00000556203 SPACA4Q8TDM5 124 aa9.69□□□□□ -0.86
ACTN1-217ENST00000556203 AMELXQ99217 191 aa9.69□□□□□ -0.86
ACTN1-217ENST00000556203 LINC01546A6NGU7 62 aa9.68□□□□□ -0.86
ACTN1-217ENST00000556203 LINC00173Q6ZV60 143 aa9.68□□□□□ -0.86
ACTN1-217ENST00000556203 FA2HQ7L5A8 372 aa9.68□□□□□ -0.86
ACTN1-217ENST00000556203 CAMK2N2Q96S95 79 aa9.68□□□□□ -0.86
ACTN1-217ENST00000556203 TIMM17AQ99595 171 aa9.68□□□□□ -0.86
ACTN1-217ENST00000556203 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
ACTN1-217ENST00000556203 PAPPA-AS1Q5QFB9 102 aa9.67□□□□□ -0.86
ACTN1-217ENST00000556203 Q6ZRU5 148 aa9.67□□□□□ -0.86
ACTN1-217ENST00000556203 SLC7A5P1Q8MH63 180 aa9.67□□□□□ -0.86
ACTN1-217ENST00000556203 OR10D4PQ8NGN7 298 aa9.67□□□□□ -0.86
ACTN1-217ENST00000556203 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
ACTN1-217ENST00000556203 SCGB3A1Q96QR1 104 aa9.67□□□□□ -0.86
ACTN1-217ENST00000556203 SMCO4Q9NRQ5 59 aa9.67□□□□□ -0.86
ACTN1-217ENST00000556203 A0A087WYN8 130 aa9.66□□□□□ -0.86
ACTN1-217ENST00000556203 A0A087WZ39 114 aa9.66□□□□□ -0.86
ACTN1-217ENST00000556203 MAJINQ3KP22 176 aa9.66□□□□□ -0.86
ACTN1-217ENST00000556203 C2orf48Q96LS8 159 aa9.66□□□□□ -0.86
ACTN1-217ENST00000556203 YPEL4Q96NS1 127 aa9.66□□□□□ -0.86
ACTN1-217ENST00000556203 A0A096LNI7 61 aa9.65□□□□□ -0.86
ACTN1-217ENST00000556203 ERASQ7Z444 233 aa9.65□□□□□ -0.86
ACTN1-217ENST00000556203 PKIGQ9Y2B9 76 aa9.65□□□□□ -0.86
ACTN1-217ENST00000556203 CBLN2Q8IUK8 224 aa9.64□□□□□ -0.87
ACTN1-217ENST00000556203 C18orf32Q8TCD1 76 aa9.64□□□□□ -0.87
ACTN1-217ENST00000556203 LINC01549A6NIU2 74 aa9.63□□□□□ -0.87
ACTN1-217ENST00000556203 PLAC8Q9NZF1 115 aa9.63□□□□□ -0.87
ACTN1-217ENST00000556203 VPS13BQ7Z7G8 4022 aa9.62□□□□□ -0.87
ACTN1-217ENST00000556203 LINC00614P0C842 121 aa9.62□□□□□ -0.87
ACTN1-217ENST00000556203 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
ACTN1-217ENST00000556203 FAM19A3Q7Z5A8 133 aa9.62□□□□□ -0.87
ACTN1-217ENST00000556203 URB1-AS1Q96HZ7 61 aa9.62□□□□□ -0.87
ACTN1-217ENST00000556203 LINC00474Q9P2X8 69 aa9.62□□□□□ -0.87
ACTN1-217ENST00000556203 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
ACTN1-217ENST00000556203 F8WDY8 70 aa9.61□□□□□ -0.87
ACTN1-217ENST00000556203 NDUFA1O15239 70 aa9.61□□□□□ -0.87
ACTN1-217ENST00000556203 KRTAP10-4P60372 401 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-217ENST00000556203 SEC11AP67812 179 aa9.61□□□□□ -0.87
ACTN1-217ENST00000556203 GAGE2BQ13066 116 aa9.61□□□□□ -0.87
ACTN1-217ENST00000556203 LINC01561Q8N1V8 128 aa9.61□□□□□ -0.87
ACTN1-217ENST00000556203 STPG4Q8N801 248 aa9.61□□□□□ -0.87
ACTN1-217ENST00000556203 A0A0J9YXV3 536 aa9.6□□□□□ -0.87
ACTN1-217ENST00000556203 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-217ENST00000556203 PTTG1IPP53801 180 aa9.6□□□□□ -0.87
ACTN1-217ENST00000556203 HERVK_113P63121 156 aa9.6□□□□□ -0.87
ACTN1-217ENST00000556203 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
ACTN1-217ENST00000556203 GEMIN7Q9H840 131 aaKnown RBP9.6□□□□□ -0.87
ACTN1-217ENST00000556203 MRPL35Q9NZE8 188 aaKnown RBP9.6□□□□□ -0.87
ACTN1-217ENST00000556203 A0A096LNJ9 63 aa9.59□□□□□ -0.87
ACTN1-217ENST00000556203 RNF151Q2KHN1 245 aa9.59□□□□□ -0.87
ACTN1-217ENST00000556203 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
ACTN1-217ENST00000556203 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
ACTN1-217ENST00000556203 CST9LQ9H4G1 147 aa9.59□□□□□ -0.87
ACTN1-217ENST00000556203 HBDP02042 147 aa9.58□□□□□ -0.88
ACTN1-217ENST00000556203 RAB5BP61020 215 aa9.58□□□□□ -0.88
ACTN1-217ENST00000556203 RPL18AQ02543 176 aaKnown RBP9.58□□□□□ -0.88
ACTN1-217ENST00000556203 PMVKQ15126 192 aa9.58□□□□□ -0.88
ACTN1-217ENST00000556203 PMCHL1Q16048 86 aa9.58□□□□□ -0.88
ACTN1-217ENST00000556203 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
ACTN1-217ENST00000556203 CDKN2A-AS1Q9UH64 79 aa9.58□□□□□ -0.88
ACTN1-217ENST00000556203 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-217ENST00000556203 TOMM7Q9P0U1 55 aa9.57□□□□□ -0.88
ACTN1-217ENST00000556203 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
ACTN1-217ENST00000556203 PRSS2P07478 247 aa9.56□□□□□ -0.88
ACTN1-217ENST00000556203 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
ACTN1-217ENST00000556203 LINC00469Q8N7U9 141 aa9.56□□□□□ -0.88
ACTN1-217ENST00000556203 C7orf33Q8WU49 177 aa9.56□□□□□ -0.88
ACTN1-217ENST00000556203 NDUFA6P56556 154 aa9.54□□□□□ -0.88
ACTN1-217ENST00000556203 PDZD11Q5EBL8 140 aa9.54□□□□□ -0.88
ACTN1-217ENST00000556203 Q8IZM0 81 aa9.54□□□□□ -0.88
ACTN1-217ENST00000556203 IGLV5-45A0A087WSX0 123 aa9.53□□□□□ -0.88
ACTN1-217ENST00000556203 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
ACTN1-217ENST00000556203 TRGC2P03986 189 aa9.53□□□□□ -0.88
ACTN1-217ENST00000556203 TLX1NBP0CAT3 122 aa9.53□□□□□ -0.88
ACTN1-217ENST00000556203 CKS1BP61024 79 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms