RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 C5orf38Q86SI9 138 aa5.23□□□□□ -1.57
PRKCH-218ENST00000555628 OR10D4PQ8NGN7 298 aa5.23□□□□□ -1.57
PRKCH-218ENST00000555628 S100ZQ8WXG8 99 aa5.23□□□□□ -1.57
PRKCH-218ENST00000555628 FAM104AQ969W3 186 aa5.23□□□□□ -1.57
PRKCH-218ENST00000555628 SMIM12Q96EX1 92 aa5.23□□□□□ -1.57
PRKCH-218ENST00000555628 MRAP2Q96G30 205 aa5.23□□□□□ -1.57
PRKCH-218ENST00000555628 BTF3L4Q96K17 158 aa5.23□□□□□ -1.57
PRKCH-218ENST00000555628 TMEM242Q9NWH2 141 aa5.23□□□□□ -1.57
PRKCH-218ENST00000555628 CSDC2Q9Y534 153 aaKnown RBP5.23□□□□□ -1.57
PRKCH-218ENST00000555628 TRBV27A0A0K0K1C4 114 aa5.22□□□□□ -1.57
PRKCH-218ENST00000555628 IFNA1P01562 189 aa5.22□□□□□ -1.57
PRKCH-218ENST00000555628 POLR2KP53803 58 aaKnown RBP5.22□□□□□ -1.57
PRKCH-218ENST00000555628 LINC01547P58512 204 aaPredicted RBP5.22□□□□□ -1.57
PRKCH-218ENST00000555628 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
PRKCH-218ENST00000555628 C9orf129Q5T035 196 aaKnown RBP5.22□□□□□ -1.57
PRKCH-218ENST00000555628 LINC00242Q5T6M2 205 aa5.22□□□□□ -1.57
PRKCH-218ENST00000555628 FAM210AQ96ND0 272 aa5.22□□□□□ -1.57
PRKCH-218ENST00000555628 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 IGHV3OR16-9A0A0B4J2B5 98 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 F8WDY8 70 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 PFDN1O60925 122 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 GIPP09681 153 aaPredicted RBP5.21□□□□□ -1.58
PRKCH-218ENST00000555628 ASB16-AS1Q495Z4 193 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 RNASE13Q5GAN3 156 aaKnown RBP5.21□□□□□ -1.58
PRKCH-218ENST00000555628 UNQ6190/PRO20217Q6UXQ8 127 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 TYMSOSQ8TAI1 123 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 SFT2D1Q8WV19 159 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 IMMP2LQ96T52 175 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 UBE2D4Q9Y2X8 147 aa5.21□□□□□ -1.58
PRKCH-218ENST00000555628 FXYD6-FXYD2A0A087WZ82 144 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 A0A1B0GV50 99 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 XKRY2A2RUG3 117 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 C7orf77A4D0Y5 90 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 RAB19A4D1S5 217 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 PRYO14603 147 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 IGKV2-30P06310 120 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 CRYGAP11844 174 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 PMCHP20382 165 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 UBE2BP63146 152 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 CCL20P78556 96 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 TWIST1Q15672 202 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 TEX261Q6UWH6 196 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 Q6ZUT4 128 aa5.2□□□□□ -1.58
PRKCH-218ENST00000555628 TRAV13-1A0A0B4J241 112 aa5.19□□□□□ -1.58
PRKCH-218ENST00000555628 NDUFA1O15239 70 aa5.19□□□□□ -1.58
PRKCH-218ENST00000555628 GAGE2EQ4V326 116 aa5.19□□□□□ -1.58
PRKCH-218ENST00000555628 KCNRGQ8N5I3 272 aa5.19□□□□□ -1.58
PRKCH-218ENST00000555628 NRACQ8N912 160 aa5.19□□□□□ -1.58
PRKCH-218ENST00000555628 FAM213BQ8TBF2 198 aa5.19□□□□□ -1.58
PRKCH-218ENST00000555628 ORAOV1Q8WV07 137 aa5.19□□□□□ -1.58
PRKCH-218ENST00000555628 NDUFA13Q9P0J0 144 aa5.19□□□□□ -1.58
PRKCH-218ENST00000555628 GAGE2DQ9UEU5 116 aa5.19□□□□□ -1.58
PRKCH-218ENST00000555628 CTAG1AP78358 180 aa5.18□□□□□ -1.58
PRKCH-218ENST00000555628 TMEM241Q24JQ0 296 aa5.18□□□□□ -1.58
PRKCH-218ENST00000555628 KRTAP13-1Q8IUC0 172 aa5.18□□□□□ -1.58
PRKCH-218ENST00000555628 ANAPC11Q9NYG5 84 aa5.18□□□□□ -1.58
PRKCH-218ENST00000555628 UMAD1C9J7I0 102 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 NDUFC2-KCTD14E9PQ53 114 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 K7EN84 100 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 NUPR1O60356 82 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 GNG4P50150 75 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 KRTAP13-3Q3SY46 172 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 LINC00173Q6ZV60 143 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 LINC00304Q8N9R0 145 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 TIMM21Q9BVV7 248 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 ST20Q9HBF5 79 aa5.17□□□□□ -1.58
PRKCH-218ENST00000555628 MT1HP80294 61 aa5.16□□□□□ -1.58
PRKCH-218ENST00000555628 PPDPFQ9H3Y8 114 aa5.16□□□□□ -1.58
PRKCH-218ENST00000555628 MANBALQ9NQG1 85 aa5.16□□□□□ -1.58
PRKCH-218ENST00000555628 TRBV30A0A0K0K1B3 111 aa5.15□□□□□ -1.59
PRKCH-218ENST00000555628 BCE1O60756 84 aa5.15□□□□□ -1.59
PRKCH-218ENST00000555628 FAM229BQ4G0N7 80 aa5.15□□□□□ -1.59
PRKCH-218ENST00000555628 GNG13Q9P2W3 67 aa5.15□□□□□ -1.59
PRKCH-218ENST00000555628 C22orf24Q9Y442 160 aa5.15□□□□□ -1.59
PRKCH-218ENST00000555628 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
PRKCH-218ENST00000555628 ARPC5O15511 151 aa5.14□□□□□ -1.59
PRKCH-218ENST00000555628 RPL28P46779 137 aaKnown RBP5.14□□□□□ -1.59
PRKCH-218ENST00000555628 C2orf82Q6UX34 121 aa5.14□□□□□ -1.59
PRKCH-218ENST00000555628 RAB4AP20338 218 aa5.13□□□□□ -1.59
PRKCH-218ENST00000555628 BIN3Q9NQY0 253 aa5.13□□□□□ -1.59
PRKCH-218ENST00000555628 TP73-AS1Q9UF72 201 aa5.13□□□□□ -1.59
PRKCH-218ENST00000555628 PDE6DO43924 150 aa5.12□□□□□ -1.59
PRKCH-218ENST00000555628 ZNF345Q14585 488 aa5.12□□□□□ -1.59
PRKCH-218ENST00000555628 SMIM15Q7Z3B0 74 aa5.12□□□□□ -1.59
PRKCH-218ENST00000555628 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
PRKCH-218ENST00000555628 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
PRKCH-218ENST00000555628 SMKR1H3BMG3 65 aa5.11□□□□□ -1.59
PRKCH-218ENST00000555628 VCYO14598 125 aa5.11□□□□□ -1.59
PRKCH-218ENST00000555628 KRTAP10-6P60371 365 aaPredicted RBP5.11□□□□□ -1.59
PRKCH-218ENST00000555628 RPL39P62891 51 aaKnown RBP5.11□□□□□ -1.59
PRKCH-218ENST00000555628 MRPS36P82909 103 aaKnown RBP5.11□□□□□ -1.59
PRKCH-218ENST00000555628 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
PRKCH-218ENST00000555628 AMN1Q8IY45 258 aa5.11□□□□□ -1.59
PRKCH-218ENST00000555628 OCC1Q8TAD7 63 aa5.11□□□□□ -1.59
PRKCH-218ENST00000555628 VPREB1P12018 145 aa5.1□□□□□ -1.59
PRKCH-218ENST00000555628 FCER1GP30273 86 aa5.1□□□□□ -1.59
PRKCH-218ENST00000555628 PACRGQ96M98 296 aaPredicted RBP5.1□□□□□ -1.59
PRKCH-218ENST00000555628 SMAGPQ0VAQ4 97 aa5.09□□□□□ -1.59
PRKCH-218ENST00000555628 LBHQ53QV2 105 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms