RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.31□□□□□ -2.62
SNX6-204ENST00000555541 TRBV7-3A0A075B6L6 115 aa-1.31□□□□□ -2.62
SNX6-204ENST00000555541 H0YGG7 62 aa-1.31□□□□□ -2.62
SNX6-204ENST00000555541 TSPAN19P0C672 248 aa-1.31□□□□□ -2.62
SNX6-204ENST00000555541 H1FX-AS1Q4G0G2 97 aa-1.31□□□□□ -2.62
SNX6-204ENST00000555541 Q8N8P6 123 aa-1.31□□□□□ -2.62
SNX6-204ENST00000555541 DOCK1Q14185 1865 aa-1.31□□□□□ -2.62
SNX6-204ENST00000555541 ZFHX3Q15911 3703 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 GNG14A0A1W2PPG7 69 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 HMGN4O00479 90 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 SSSCA1O60232 199 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 NBEAP1P0C6P0 100 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 B2MP61769 119 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 TSLPQ969D9 159 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 FAIMQ9NVQ4 179 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 SBF2Q86WG5 1849 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 MYH13Q9UKX3 1938 aa-1.32□□□□□ -2.62
SNX6-204ENST00000555541 DNAH2Q9P225 4427 aa-1.33□□□□□ -2.62
SNX6-204ENST00000555541 KIAA0556O60303 1618 aa-1.33□□□□□ -2.62
SNX6-204ENST00000555541 LOC285095A0A1B0GVY8 99 aa-1.33□□□□□ -2.62
SNX6-204ENST00000555541 HIST1H1DP16402 221 aaKnown RBP-1.33□□□□□ -2.62
SNX6-204ENST00000555541 MRPL54Q6P161 138 aaKnown RBP-1.33□□□□□ -2.62
SNX6-204ENST00000555541 LINC01600Q96MT4 127 aa-1.33□□□□□ -2.62
SNX6-204ENST00000555541 TPT1P8Q9HAU6 139 aa-1.33□□□□□ -2.62
SNX6-204ENST00000555541 DNHD1Q96M86 4753 aa-1.34□□□□□ -2.62
SNX6-204ENST00000555541 MYH8P13535 1937 aa-1.34□□□□□ -2.62
SNX6-204ENST00000555541 VPS13BQ7Z7G8 4022 aa-1.34□□□□□ -2.62
SNX6-204ENST00000555541 CKS1BP61024 79 aa-1.34□□□□□ -2.62
SNX6-204ENST00000555541 TSTD1Q8NFU3 115 aa-1.34□□□□□ -2.62
SNX6-204ENST00000555541 SELENOSQ9BQE4 189 aa-1.34□□□□□ -2.62
SNX6-204ENST00000555541 ABCA13Q86UQ4 5058 aa-1.34□□□□□ -2.62
SNX6-204ENST00000555541 PRG4Q92954 1404 aaPredicted RBP-1.34□□□□□ -2.62
SNX6-204ENST00000555541 RIMS1Q86UR5 1692 aaKnown RBP-1.35□□□□□ -2.63
SNX6-204ENST00000555541 MT1AP04731 61 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 IGLC1P0CG04 106 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 COPZ1P61923 177 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 SMCO1Q147U7 214 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 C12orf73Q69YU5 71 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 AKAP14Q86UN6 197 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 TCEAL4Q96EI5 215 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 LYSTQ99698 3801 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 PDCD10Q9BUL8 212 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 ARAP2Q8WZ64 1704 aa-1.35□□□□□ -2.63
SNX6-204ENST00000555541 RAPGEF6Q8TEU7 1601 aa-1.36□□□□□ -2.63
SNX6-204ENST00000555541 NXT2Q9NPJ8 142 aaKnown RBP-1.36□□□□□ -2.63
SNX6-204ENST00000555541 NBASA2RRP1 2371 aa-1.36□□□□□ -2.63
SNX6-204ENST00000555541 MAGI1Q96QZ7 1491 aaPredicted RBP-1.37□□□□□ -2.63
SNX6-204ENST00000555541 CHKB-CPT1BH3BT56 60 aa-1.37□□□□□ -2.63
SNX6-204ENST00000555541 SCGB1A1P11684 91 aa-1.37□□□□□ -2.63
SNX6-204ENST00000555541 UBE2D3P61077 147 aa-1.37□□□□□ -2.63
SNX6-204ENST00000555541 UBE2D2P62837 147 aa-1.37□□□□□ -2.63
SNX6-204ENST00000555541 WHAMMP3Q1A5X7 153 aa-1.37□□□□□ -2.63
SNX6-204ENST00000555541 TMEM191AQ9H0A3 160 aa-1.37□□□□□ -2.63
SNX6-204ENST00000555541 PRO1933Q9H354 126 aa-1.37□□□□□ -2.63
SNX6-204ENST00000555541 CRIPTQ9P021 101 aa-1.37□□□□□ -2.63
SNX6-204ENST00000555541 PLECQ15149 4684 aaKnown RBP-1.37□□□□□ -2.63
SNX6-204ENST00000555541 CDK5RAP2Q96SN8 1893 aa-1.37□□□□□ -2.63
SNX6-204ENST00000555541 FHAD1B1AJZ9 1412 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 SLIT1O75093 1534 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 H3BNG1 76 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 I3L3M4 83 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 COPS9Q8WXC6 57 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 LZICQ8WZA0 190 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 DPH3Q96FX2 82 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 FAM167A-AS1Q96KT0 104 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 SPRR4Q96PI1 79 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 CCDC167Q9P0B6 97 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 ARL2-SNX15V9GYD0 113 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 FMN2Q9NZ56 1722 aa-1.38□□□□□ -2.63
SNX6-204ENST00000555541 PRRC2CQ9Y520 2896 aaKnown RBP-1.39□□□□□ -2.63
SNX6-204ENST00000555541 DNAH11Q96DT5 4516 aa-1.39□□□□□ -2.63
SNX6-204ENST00000555541 RPS25P62851 125 aaKnown RBP-1.39□□□□□ -2.63
SNX6-204ENST00000555541 SEC11AP67812 179 aa-1.39□□□□□ -2.63
SNX6-204ENST00000555541 FAM223AQ8IWN6 122 aa-1.39□□□□□ -2.63
SNX6-204ENST00000555541 LCN9Q8WX39 176 aa-1.39□□□□□ -2.63
SNX6-204ENST00000555541 UQCR10Q9UDW1 63 aa-1.39□□□□□ -2.63
SNX6-204ENST00000555541 CCDC141Q6ZP82 1450 aa-1.39□□□□□ -2.63
SNX6-204ENST00000555541 DSPP15924 2871 aaKnown RBP-1.39□□□□□ -2.63
SNX6-204ENST00000555541 TNRC18O15417 2968 aaPredicted RBP-1.39□□□□□ -2.63
SNX6-204ENST00000555541 LAMA1P25391 3075 aa-1.39□□□□□ -2.63
SNX6-204ENST00000555541 APOBP04114 4563 aaKnown RBP-1.4□□□□□ -2.63
SNX6-204ENST00000555541 AKAP13Q12802 2813 aa-1.4□□□□□ -2.63
SNX6-204ENST00000555541 HEPN1Q6WQI6 88 aa-1.4□□□□□ -2.63
SNX6-204ENST00000555541 LSM10Q969L4 123 aaKnown RBP-1.4□□□□□ -2.63
SNX6-204ENST00000555541 KNL1Q8NG31 2342 aa-1.4□□□□□ -2.63
SNX6-204ENST00000555541 TROQ12816 1431 aaPredicted RBP-1.4□□□□□ -2.63
SNX6-204ENST00000555541 LOC100130705A0A1B0GUX0 176 aa-1.41□□□□□ -2.64
SNX6-204ENST00000555541 BTG2P78543 158 aa-1.41□□□□□ -2.64
SNX6-204ENST00000555541 COPZ2Q9P299 210 aa-1.41□□□□□ -2.64
SNX6-204ENST00000555541 CELSR3Q9NYQ7 3312 aa-1.42□□□□□ -2.64
SNX6-204ENST00000555541 TRAV30A0A087WSZ9 112 aa-1.42□□□□□ -2.64
SNX6-204ENST00000555541 MYOZ3Q8TDC0 251 aa-1.42□□□□□ -2.64
SNX6-204ENST00000555541 PPP3R2Q96LZ3 170 aa-1.42□□□□□ -2.64
SNX6-204ENST00000555541 SERP1Q9Y6X1 66 aa-1.42□□□□□ -2.64
SNX6-204ENST00000555541 MYH6P13533 1939 aa-1.42□□□□□ -2.64
SNX6-204ENST00000555541 NIPBLQ6KC79 2804 aaeCLIP-1.43□□□□□ -2.64
SNX6-204ENST00000555541 NKTRP30414 1462 aaKnown RBP-1.43□□□□□ -2.64
SNX6-204ENST00000555541 C1orf167Q5SNV9 1468 aa-1.43□□□□□ -2.64
SNX6-204ENST00000555541 A0A1B0GWA3 101 aa-1.43□□□□□ -2.64
SNX6-204ENST00000555541 SPANXDQ9BXN6 97 aa-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms