RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 IGLC6P0CF74 106 aa4.32□□□□□ -1.72
GPHN-208ENST00000555503 VAMP3Q15836 100 aa4.32□□□□□ -1.72
GPHN-208ENST00000555503 LINC00526Q96FQ7 95 aa4.32□□□□□ -1.72
GPHN-208ENST00000555503 LINC01600Q96MT4 127 aa4.32□□□□□ -1.72
GPHN-208ENST00000555503 GNG13Q9P2W3 67 aa4.32□□□□□ -1.72
GPHN-208ENST00000555503 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
GPHN-208ENST00000555503 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
GPHN-208ENST00000555503 RAB19A4D1S5 217 aa4.31□□□□□ -1.72
GPHN-208ENST00000555503 RPS10P46783 165 aaKnown RBP4.31□□□□□ -1.72
GPHN-208ENST00000555503 COTL1Q14019 142 aa4.31□□□□□ -1.72
GPHN-208ENST00000555503 LYZL1Q6UWQ5 148 aa4.31□□□□□ -1.72
GPHN-208ENST00000555503 MBD3L1Q8WWY6 194 aa4.31□□□□□ -1.72
GPHN-208ENST00000555503 NIT2Q9NQR4 276 aa4.31□□□□□ -1.72
GPHN-208ENST00000555503 LPAP08519 4548 aa4.31□□□□□ -1.72
GPHN-208ENST00000555503 A0A0J9YXV3 536 aa4.3□□□□□ -1.72
GPHN-208ENST00000555503 NDUFS6O75380 124 aaKnown RBP4.3□□□□□ -1.72
GPHN-208ENST00000555503 CACNG7P62955 275 aa4.3□□□□□ -1.72
GPHN-208ENST00000555503 CCL20P78556 96 aa4.3□□□□□ -1.72
GPHN-208ENST00000555503 AMMECR1LQ6DCA0 310 aa4.3□□□□□ -1.72
GPHN-208ENST00000555503 RPL39LQ96EH5 51 aaKnown RBP4.3□□□□□ -1.72
GPHN-208ENST00000555503 C19orf71A6NCJ1 209 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 UMAD1C9J7I0 102 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 SMKR1H3BMG3 65 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 SERF1AO75920 110 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 GAS8-AS1O95177 125 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 IFNA1P01562 189 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 TRGC1P0CF51 173 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 NTF3P20783 257 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 XCL1P47992 114 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 GNG4P50150 75 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 RPS20P60866 119 aaKnown RBP4.29□□□□□ -1.72
GPHN-208ENST00000555503 Q1RN00 199 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 GATD1Q8NB37 220 aa4.29□□□□□ -1.72
GPHN-208ENST00000555503 TRBV20OR9-2A0A075B6H5 130 aa4.28□□□□□ -1.72
GPHN-208ENST00000555503 GVQW2A0A096LPI5 108 aaPredicted RBP4.28□□□□□ -1.72
GPHN-208ENST00000555503 KANTRA0A1W2PQU2 76 aa4.28□□□□□ -1.72
GPHN-208ENST00000555503 BCL2L11O43521 198 aa4.28□□□□□ -1.72
GPHN-208ENST00000555503 APCSP02743 223 aa4.28□□□□□ -1.72
GPHN-208ENST00000555503 FGF6P10767 208 aa4.28□□□□□ -1.72
GPHN-208ENST00000555503 FOXA3P55318 350 aaPredicted RBP4.28□□□□□ -1.72
GPHN-208ENST00000555503 KRTAP10-8P60410 259 aa4.28□□□□□ -1.72
GPHN-208ENST00000555503 MAP1LC3CQ9BXW4 147 aa4.28□□□□□ -1.72
GPHN-208ENST00000555503 MANBALQ9NQG1 85 aa4.28□□□□□ -1.72
GPHN-208ENST00000555503 F2Z2F3 143 aa4.27□□□□□ -1.73
GPHN-208ENST00000555503 CCL25O15444 150 aa4.27□□□□□ -1.73
GPHN-208ENST00000555503 CTRLP40313 264 aa4.27□□□□□ -1.73
GPHN-208ENST00000555503 ZNF345Q14585 488 aa4.27□□□□□ -1.73
GPHN-208ENST00000555503 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
GPHN-208ENST00000555503 CARD19Q96LW7 228 aa4.27□□□□□ -1.73
GPHN-208ENST00000555503 RNASE7Q9H1E1 156 aaKnown RBP4.27□□□□□ -1.73
GPHN-208ENST00000555503 MED9Q9NWA0 146 aa4.27□□□□□ -1.73
GPHN-208ENST00000555503 SDHAF1A6NFY7 115 aa4.26□□□□□ -1.73
GPHN-208ENST00000555503 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
GPHN-208ENST00000555503 MEF2BQ02080 365 aaPredicted RBP4.26□□□□□ -1.73
GPHN-208ENST00000555503 CBLN2Q8IUK8 224 aa4.26□□□□□ -1.73
GPHN-208ENST00000555503 C9orf62Q8N4C0 152 aa4.26□□□□□ -1.73
GPHN-208ENST00000555503 OR5A1Q8NGJ0 315 aa4.26□□□□□ -1.73
GPHN-208ENST00000555503 IGHV1-58A0A0C4DH39 117 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 LINC00959A0A1B0GUT2 108 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 K7EN84 100 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 BCL2P10415 239 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 RAB4AP20338 218 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 SYCNQ0VAF6 134 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 KIAA0087Q14695 138 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 RGS21Q2M5E4 152 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 TMEM101Q96IK0 257 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 BTF3L4Q96K17 158 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 RPP21Q9H633 154 aaKnown RBP4.25□□□□□ -1.73
GPHN-208ENST00000555503 TMEM242Q9NWH2 141 aa4.25□□□□□ -1.73
GPHN-208ENST00000555503 IGLV4-69A0A075B6H9 119 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 A6NDN8 102 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 HMSDA8MTL9 139 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 PDE6DO43924 150 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 NCR2O95944 276 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 RNASE13Q5GAN3 156 aaKnown RBP4.24□□□□□ -1.73
GPHN-208ENST00000555503 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 KRTAP7-1Q8IUC3 87 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 SMIM12Q96EX1 92 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 CNFNQ9BYD5 112 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 LINC00474Q9P2X8 69 aa4.24□□□□□ -1.73
GPHN-208ENST00000555503 TRAV1-1A0A0B4J248 108 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 LOC107984640A0A0U1RRK4 108 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 A0A1W2PNN7 141 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 I3L3M4 83 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 MT-ND6P03923 174 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 ZNF25P17030 456 aaPredicted RBP4.23□□□□□ -1.73
GPHN-208ENST00000555503 EIF5AP63241 154 aaKnown RBP4.23□□□□□ -1.73
GPHN-208ENST00000555503 RPL18AQ02543 176 aaKnown RBP4.23□□□□□ -1.73
GPHN-208ENST00000555503 SS18Q15532 418 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 PHF5AQ7RTV0 110 aaKnown RBP4.23□□□□□ -1.73
GPHN-208ENST00000555503 SMIM15Q7Z3B0 74 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 MRAP2Q96G30 205 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 BIN3Q9NQY0 253 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 BATF3Q9NR55 127 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 PSORS1C2Q9UIG4 136 aa4.23□□□□□ -1.73
GPHN-208ENST00000555503 KRTAP4-16G5E9R7 235 aaPredicted RBP4.22□□□□□ -1.73
GPHN-208ENST00000555503 CEBPGP53567 150 aa4.22□□□□□ -1.73
GPHN-208ENST00000555503 C1orf137Q5JT78 98 aa4.22□□□□□ -1.73
GPHN-208ENST00000555503 ZNF664Q8N3J9 261 aa4.22□□□□□ -1.73
GPHN-208ENST00000555503 CAMK2N2Q96S95 79 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms