RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 VCX2Q9H322 139 aa6.87□□□□□ -1.31
PSEN1-213ENST00000555386 SPANXA1Q9NS26 97 aa6.87□□□□□ -1.31
PSEN1-213ENST00000555386 LEPROTO15243 131 aa6.86□□□□□ -1.31
PSEN1-213ENST00000555386 UBE2DNLQ8IWF7 75 aa6.86□□□□□ -1.31
PSEN1-213ENST00000555386 DNAH6Q9C0G6 4158 aa6.86□□□□□ -1.31
PSEN1-213ENST00000555386 LOC100131303A0A0U1RQF7 123 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 TMEM223A0PJW6 202 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 J3QQQ9 107 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 LCE2AQ5TA79 106 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-213ENST00000555386 LINC00476Q8WZB0 136 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 PRO0255Q9UI72 69 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 LCE6AA0A183 80 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 K7ERJ3 54 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 K7ERU9 68 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 GYPEP15421 78 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 LGALS3P17931 250 aaKnown RBP6.85□□□□□ -1.31
PSEN1-213ENST00000555386 MRPS36P82909 103 aaKnown RBP6.85□□□□□ -1.31
PSEN1-213ENST00000555386 SRSF9Q13242 221 aaKnown RBP eCLIP6.85□□□□□ -1.31
PSEN1-213ENST00000555386 OCIAD2Q56VL3 154 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 Q6ZSN1 163 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 SLC25A29Q8N8R3 303 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 C15orf53Q8NAA6 179 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
PSEN1-213ENST00000555386 TRBV10-1A0A0K0K1A3 114 aa6.84□□□□□ -1.31
PSEN1-213ENST00000555386 CIDEAO60543 219 aa6.84□□□□□ -1.31
PSEN1-213ENST00000555386 ZNF22P17026 224 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-213ENST00000555386 UBE2D1P51668 147 aa6.84□□□□□ -1.31
PSEN1-213ENST00000555386 RBX1P62877 108 aa6.84□□□□□ -1.31
PSEN1-213ENST00000555386 COTL1Q14019 142 aa6.84□□□□□ -1.31
PSEN1-213ENST00000555386 NAA38Q9BRA0 125 aaKnown RBP6.84□□□□□ -1.31
PSEN1-213ENST00000555386 CHCHD7Q9BUK0 85 aa6.84□□□□□ -1.31
PSEN1-213ENST00000555386 TIMM21Q9BVV7 248 aa6.84□□□□□ -1.31
PSEN1-213ENST00000555386 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
PSEN1-213ENST00000555386 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-213ENST00000555386 UBE2D4Q9Y2X8 147 aa6.83□□□□□ -1.32
PSEN1-213ENST00000555386 ICOSQ9Y6W8 199 aa6.83□□□□□ -1.32
PSEN1-213ENST00000555386 A0A0J9YXV3 536 aa6.82□□□□□ -1.32
PSEN1-213ENST00000555386 TINCRA0A1B0GVN0 87 aa6.82□□□□□ -1.32
PSEN1-213ENST00000555386 H3BS24 57 aa6.82□□□□□ -1.32
PSEN1-213ENST00000555386 TSPEAR-AS2P59090 65 aa6.82□□□□□ -1.32
PSEN1-213ENST00000555386 SMAGPQ0VAQ4 97 aa6.82□□□□□ -1.32
PSEN1-213ENST00000555386 FAM104AQ969W3 186 aa6.82□□□□□ -1.32
PSEN1-213ENST00000555386 GAGE12JA6NER3 117 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 F8W1H4 67 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 K7EQD1 137 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 IGHV3-30P01768 117 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 IGHV3-30-5P0DP03 117 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 CCL18P55774 89 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 GAGE4Q13068 117 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 GAGE5Q13069 117 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 GAGE13Q4V321 117 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 LYRM7Q5U5X0 104 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 Q9UF83 564 aa6.81□□□□□ -1.32
PSEN1-213ENST00000555386 TMEM238C9JI98 176 aa6.8□□□□□ -1.32
PSEN1-213ENST00000555386 M0R2N4 97 aa6.8□□□□□ -1.32
PSEN1-213ENST00000555386 RPL36AP83881 106 aaKnown RBP6.8□□□□□ -1.32
PSEN1-213ENST00000555386 MRPL23Q16540 153 aaKnown RBP6.8□□□□□ -1.32
PSEN1-213ENST00000555386 ESRGQ1W209 222 aa6.8□□□□□ -1.32
PSEN1-213ENST00000555386 DAZ4Q86SG3 579 aaKnown RBP6.8□□□□□ -1.32
PSEN1-213ENST00000555386 RPL36ALQ969Q0 106 aaKnown RBP6.8□□□□□ -1.32
PSEN1-213ENST00000555386 DAZ3Q9NR90 486 aaKnown RBP6.8□□□□□ -1.32
PSEN1-213ENST00000555386 LINC00588Q9Y4M8 146 aa6.8□□□□□ -1.32
PSEN1-213ENST00000555386 IGHV1-58A0A0C4DH39 117 aa6.79□□□□□ -1.32
PSEN1-213ENST00000555386 TRBV6-4A0A1B0GX49 114 aa6.79□□□□□ -1.32
PSEN1-213ENST00000555386 H3BNG1 76 aa6.79□□□□□ -1.32
PSEN1-213ENST00000555386 TIRAPP58753 221 aa6.79□□□□□ -1.32
PSEN1-213ENST00000555386 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
PSEN1-213ENST00000555386 IGLV5-45A0A087WSX0 123 aa6.79□□□□□ -1.32
PSEN1-213ENST00000555386 IGHV3-30-3P0DP02 117 aa6.79□□□□□ -1.32
PSEN1-213ENST00000555386 RPL24P83731 157 aaKnown RBP6.79□□□□□ -1.32
PSEN1-213ENST00000555386 FAM19A3Q7Z5A8 133 aa6.79□□□□□ -1.32
PSEN1-213ENST00000555386 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.78□□□□□ -1.32
PSEN1-213ENST00000555386 IGKV2-29A2NJV5 120 aaPredicted RBP6.78□□□□□ -1.32
PSEN1-213ENST00000555386 LYPD5Q6UWN5 251 aa6.78□□□□□ -1.32
PSEN1-213ENST00000555386 GTSF1LQ9H1H1 148 aa6.78□□□□□ -1.32
PSEN1-213ENST00000555386 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.77□□□□□ -1.33
PSEN1-213ENST00000555386 A0A0B4J2C4 111 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 A0A0J9YXY3 114 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 H7C423 109 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 TSPAN13O95857 204 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 UBE2D3P61077 147 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 UBE2D2P62837 147 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 DGAT2L7PQ6IED9 249 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 Q6ZUT4 128 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 C10orf126Q8N4M7 172 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 ATP6V0E2Q8NHE4 81 aa6.77□□□□□ -1.33
PSEN1-213ENST00000555386 GEMIN7Q9H840 131 aaKnown RBP6.77□□□□□ -1.33
PSEN1-213ENST00000555386 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 IGHV3-38A0A0C4DH36 116 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 TIMM17BO60830 172 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 CFC1BP0CG36 223 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 CFC1P0CG37 223 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 HERVK_113P63121 156 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 SPANXCQ9NY87 97 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 PRO1854Q9UHT4 67 aa6.76□□□□□ -1.33
PSEN1-213ENST00000555386 DNAH10Q8IVF4 4471 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms