RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 DNAH6Q9C0G6 4158 aa6.76□□□□□ -1.33
SYNE2-215ENST00000554997 IGHV3OR16-9A0A0B4J2B5 98 aa6.76□□□□□ -1.33
SYNE2-215ENST00000554997 TINCRA0A1B0GVN0 87 aa6.76□□□□□ -1.33
SYNE2-215ENST00000554997 COX6A2Q02221 97 aa6.76□□□□□ -1.33
SYNE2-215ENST00000554997 HIST3H2BBQ8N257 126 aa6.76□□□□□ -1.33
SYNE2-215ENST00000554997 MAP1LC3CQ9BXW4 147 aa6.76□□□□□ -1.33
SYNE2-215ENST00000554997 PGPEP1Q9NXJ5 209 aa6.76□□□□□ -1.33
SYNE2-215ENST00000554997 KMT2AQ03164 3969 aa6.76□□□□□ -1.33
SYNE2-215ENST00000554997 A0A0J9YXV3 536 aa6.75□□□□□ -1.33
SYNE2-215ENST00000554997 LRCOL1A6NCL2 159 aa6.75□□□□□ -1.33
SYNE2-215ENST00000554997 S100A2P29034 98 aa6.75□□□□□ -1.33
SYNE2-215ENST00000554997 HERVK_113P63121 156 aa6.75□□□□□ -1.33
SYNE2-215ENST00000554997 LINC00336Q6ZUF6 198 aa6.75□□□□□ -1.33
SYNE2-215ENST00000554997 SPATA12Q7Z6I5 190 aa6.75□□□□□ -1.33
SYNE2-215ENST00000554997 LINC00528Q8N1L1 170 aa6.75□□□□□ -1.33
SYNE2-215ENST00000554997 CHTOPQ9Y3Y2 248 aaKnown RBP6.75□□□□□ -1.33
SYNE2-215ENST00000554997 CFAP161Q6P656 301 aa6.74□□□□□ -1.33
SYNE2-215ENST00000554997 HIST1H2BLQ99880 126 aa6.74□□□□□ -1.33
SYNE2-215ENST00000554997 GEMIN7Q9H840 131 aaKnown RBP6.74□□□□□ -1.33
SYNE2-215ENST00000554997 A0A087WTM6 91 aa6.73□□□□□ -1.33
SYNE2-215ENST00000554997 A0A087WZ39 114 aa6.73□□□□□ -1.33
SYNE2-215ENST00000554997 SYS1-DBNDD2H3BUS1 97 aa6.73□□□□□ -1.33
SYNE2-215ENST00000554997 COX7A2LO14548 114 aa6.73□□□□□ -1.33
SYNE2-215ENST00000554997 IGLC3P0DOY3 106 aa6.73□□□□□ -1.33
SYNE2-215ENST00000554997 TNP2Q05952 138 aa6.73□□□□□ -1.33
SYNE2-215ENST00000554997 C5orf38Q86SI9 138 aa6.73□□□□□ -1.33
SYNE2-215ENST00000554997 LINC01561Q8N1V8 128 aa6.73□□□□□ -1.33
SYNE2-215ENST00000554997 IGLV4-69A0A075B6H9 119 aa6.72□□□□□ -1.33
SYNE2-215ENST00000554997 IGLV5-45A0A087WSX0 123 aa6.72□□□□□ -1.33
SYNE2-215ENST00000554997 F8VRH5 84 aa6.72□□□□□ -1.33
SYNE2-215ENST00000554997 H0Y8G0 127 aa6.72□□□□□ -1.33
SYNE2-215ENST00000554997 C3orf79P0CE67 100 aa6.72□□□□□ -1.33
SYNE2-215ENST00000554997 MALP21145 153 aa6.72□□□□□ -1.33
SYNE2-215ENST00000554997 ODF1Q14990 250 aa6.72□□□□□ -1.33
SYNE2-215ENST00000554997 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
SYNE2-215ENST00000554997 MRPL35Q9NZE8 188 aaKnown RBP6.72□□□□□ -1.33
SYNE2-215ENST00000554997 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
SYNE2-215ENST00000554997 IGHV1-58A0A0C4DH39 117 aa6.71□□□□□ -1.34
SYNE2-215ENST00000554997 USP17L23D6RBM5 183 aa6.71□□□□□ -1.34
SYNE2-215ENST00000554997 EREGO14944 169 aa6.71□□□□□ -1.34
SYNE2-215ENST00000554997 TMA7Q9Y2S6 64 aaKnown RBP6.71□□□□□ -1.34
SYNE2-215ENST00000554997 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 IGHV3-64A0A075B6Q5 118 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 LECT2O14960 151 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 APOMO95445 188 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 KRTDAPP60985 99 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 WFDC2Q14508 124 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 C14orf177Q52M58 125 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 LINC00469Q8N7U9 141 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 Q8N814 137 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 CHAC1Q9BUX1 264 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 BIRC6Q9NR09 4857 aa6.7□□□□□ -1.34
SYNE2-215ENST00000554997 FRAS1Q86XX4 4008 aa6.69□□□□□ -1.34
SYNE2-215ENST00000554997 C11orf86A6NJI1 115 aa6.69□□□□□ -1.34
SYNE2-215ENST00000554997 H3BRM9 83 aa6.69□□□□□ -1.34
SYNE2-215ENST00000554997 ZNF22P17026 224 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-215ENST00000554997 PLNP26678 52 aa6.69□□□□□ -1.34
SYNE2-215ENST00000554997 LINC01545Q5VT33 79 aa6.69□□□□□ -1.34
SYNE2-215ENST00000554997 C15orf56Q8N910 161 aa6.69□□□□□ -1.34
SYNE2-215ENST00000554997 GVQW2A0A096LPI5 108 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-215ENST00000554997 hDV102S1A0JD36 115 aa6.68□□□□□ -1.34
SYNE2-215ENST00000554997 DPM2O94777 84 aa6.68□□□□□ -1.34
SYNE2-215ENST00000554997 IGKCP01834 107 aa6.68□□□□□ -1.34
SYNE2-215ENST00000554997 TMEM170BQ5T4T1 132 aa6.68□□□□□ -1.34
SYNE2-215ENST00000554997 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-215ENST00000554997 OR10D4PQ8NGN7 298 aa6.68□□□□□ -1.34
SYNE2-215ENST00000554997 PMCHL2Q9BQD1 86 aa6.68□□□□□ -1.34
SYNE2-215ENST00000554997 ZNF561-AS1K7EIQ3 104 aa6.67□□□□□ -1.34
SYNE2-215ENST00000554997 AKR1D1P51857 326 aa6.67□□□□□ -1.34
SYNE2-215ENST00000554997 DNAH17Q9UFH2 4485 aa6.67□□□□□ -1.34
SYNE2-215ENST00000554997 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
SYNE2-215ENST00000554997 C20orf202A1L168 122 aa6.66□□□□□ -1.34
SYNE2-215ENST00000554997 SMIM1B2RUZ4 78 aa6.66□□□□□ -1.34
SYNE2-215ENST00000554997 F8WDY8 70 aa6.66□□□□□ -1.34
SYNE2-215ENST00000554997 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
SYNE2-215ENST00000554997 C6orf226Q5I0X4 101 aa6.66□□□□□ -1.34
SYNE2-215ENST00000554997 NTN5Q8WTR8 489 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-215ENST00000554997 ORAOV1Q8WV07 137 aa6.66□□□□□ -1.34
SYNE2-215ENST00000554997 IGLV5-39A0A0G2JS06 123 aa6.65□□□□□ -1.34
SYNE2-215ENST00000554997 A0A1B0GVY2 172 aa6.65□□□□□ -1.34
SYNE2-215ENST00000554997 SLPIP03973 132 aa6.65□□□□□ -1.34
SYNE2-215ENST00000554997 SPINK8P0C7L1 97 aa6.65□□□□□ -1.34
SYNE2-215ENST00000554997 HIGD2BQ4VC39 106 aa6.65□□□□□ -1.34
SYNE2-215ENST00000554997 Q8IZM0 81 aa6.65□□□□□ -1.34
SYNE2-215ENST00000554997 C2orf48Q96LS8 159 aa6.65□□□□□ -1.34
SYNE2-215ENST00000554997 PRSS2P07478 247 aa6.64□□□□□ -1.35
SYNE2-215ENST00000554997 CNBPP62633 177 aaKnown RBP6.64□□□□□ -1.35
SYNE2-215ENST00000554997 SPAG11BQ08648 103 aa6.64□□□□□ -1.35
SYNE2-215ENST00000554997 COX7B2Q8TF08 81 aa6.64□□□□□ -1.35
SYNE2-215ENST00000554997 LINC00526Q96FQ7 95 aa6.64□□□□□ -1.35
SYNE2-215ENST00000554997 FAT2Q9NYQ8 4349 aa6.64□□□□□ -1.35
SYNE2-215ENST00000554997 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-215ENST00000554997 KRTAP10-2P60368 255 aa6.63□□□□□ -1.35
SYNE2-215ENST00000554997 SYCNQ0VAF6 134 aa6.63□□□□□ -1.35
SYNE2-215ENST00000554997 CDPF1Q6NVV7 123 aa6.63□□□□□ -1.35
SYNE2-215ENST00000554997 CAMK2N2Q96S95 79 aa6.63□□□□□ -1.35
SYNE2-215ENST00000554997 TOMM7Q9P0U1 55 aa6.63□□□□□ -1.35
SYNE2-215ENST00000554997 IGLV5-52A0A0A0MRZ9 124 aa6.62□□□□□ -1.35
SYNE2-215ENST00000554997 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-215ENST00000554997 SCGB1D1O95968 90 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms