RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 TMEM191AQ9H0A3 160 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 IGLV10-54A0A075B6I4 117 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-231ENST00000554994 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-231ENST00000554994 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-231ENST00000554994 FAM231BA6NCW3 169 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 USP17L23D6RBM5 183 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 I3L3M4 83 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 K7EP13 123 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 HLA-DQA1P01909 254 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 APCSP02743 223 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 TRGC2P03986 189 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 Q0VG73 95 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
ATXN3-231ENST00000554994 MPV17L2Q567V2 206 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 NTM-AS1Q6ZSK4 140 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 LINC00269Q8N2A0 174 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 TMEM18Q96B42 140 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 TMEM101Q96IK0 257 aa3.1□□□□□ -1.91
ATXN3-231ENST00000554994 FAT3Q8TDW7 4589 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 A0A087WTM6 91 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 A0A1B0GW15 77 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 IFITM10A6NMD0 228 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 VCYO14598 125 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 PPP1R17O96001 155 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 LINC00694P0DN24 101 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 RBX1P62877 108 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 HBBP68871 147 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 FAM104BQ5XKR9 115 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 RNF185Q96GF1 192 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 CNFNQ9BYD5 112 aa3.09□□□□□ -1.91
ATXN3-231ENST00000554994 IGLV4-60A0A075B6I1 120 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 IGLV5-52A0A0A0MRZ9 124 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 D6R8Y8 96 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 ESDP10768 282 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 MT3P25713 68 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 DDTP30046 118 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 REG3AQ06141 175 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 KIAA1644Q3SXP7 199 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 ENHOQ6UWT2 76 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 TMEM136Q6ZRR5 245 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 KIR2DL4Q99706 377 aa3.08□□□□□ -1.92
ATXN3-231ENST00000554994 TCAPO15273 167 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 TSHBP01222 138 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 MT-ND6P03923 174 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 FGF6P10767 208 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 FABP4P15090 132 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 KRTAP10-1P60331 282 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 LAGE3Q14657 143 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 SS18Q15532 418 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 MIAQ16674 131 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
ATXN3-231ENST00000554994 Q6ZRN7 208 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-231ENST00000554994 ORMDL3Q8N138 153 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 C14orf144Q96I85 54 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 TMEM70Q9BUB7 260 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 CHCHD7Q9BUK0 85 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
ATXN3-231ENST00000554994 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 TRBV6-5A0A0K0K1A5 114 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 A0A1B0GUV1 79 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 hDV102S1A0JD36 115 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 NPYP01303 97 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 PPBPP02775 128 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 POLR2KP53803 58 aaKnown RBP3.06□□□□□ -1.92
ATXN3-231ENST00000554994 SMAGPQ0VAQ4 97 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 LINC01620Q4KN68 170 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 ATP5L2Q7Z4Y8 100 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 Q8N814 137 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 C20orf203Q8NBC4 194 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 C20orf78Q9BR46 151 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
ATXN3-231ENST00000554994 TRAV13-1A0A0B4J241 112 aa3.05□□□□□ -1.92
ATXN3-231ENST00000554994 TRAV8-4A0A0B4J246 113 aa3.05□□□□□ -1.92
ATXN3-231ENST00000554994 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
ATXN3-231ENST00000554994 A0A1B0GXF2 115 aa3.05□□□□□ -1.92
ATXN3-231ENST00000554994 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
ATXN3-231ENST00000554994 H7C423 109 aa3.05□□□□□ -1.92
ATXN3-231ENST00000554994 M0R143 59 aa3.05□□□□□ -1.92
ATXN3-231ENST00000554994 XCL1P47992 114 aa3.05□□□□□ -1.92
ATXN3-231ENST00000554994 RPL39P62891 51 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms