RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 A0A087WTM6 91 aa10.87□□□□□ -0.67
SPTLC2-203ENST00000554901 TINCRA0A1B0GVN0 87 aa10.87□□□□□ -0.67
SPTLC2-203ENST00000554901 COX7A2LO14548 114 aa10.87□□□□□ -0.67
SPTLC2-203ENST00000554901 EREGO14944 169 aa10.87□□□□□ -0.67
SPTLC2-203ENST00000554901 TNP2Q05952 138 aa10.87□□□□□ -0.67
SPTLC2-203ENST00000554901 C14orf177Q52M58 125 aa10.87□□□□□ -0.67
SPTLC2-203ENST00000554901 CFAP161Q6P656 301 aa10.87□□□□□ -0.67
SPTLC2-203ENST00000554901 MAP1LC3CQ9BXW4 147 aa10.87□□□□□ -0.67
SPTLC2-203ENST00000554901 LINC01561Q8N1V8 128 aa10.86□□□□□ -0.67
SPTLC2-203ENST00000554901 GEMIN7Q9H840 131 aaKnown RBP10.86□□□□□ -0.67
SPTLC2-203ENST00000554901 A0A0J9YXV3 536 aa10.85□□□□□ -0.67
SPTLC2-203ENST00000554901 HIST3H2BBQ8N257 126 aa10.85□□□□□ -0.67
SPTLC2-203ENST00000554901 A0A087WZ39 114 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 IGLC3P0DOY3 106 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 AKR1D1P51857 326 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 CHTOPQ9Y3Y2 248 aaKnown RBP10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 DNAH10Q8IVF4 4471 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 DNAH17Q9UFH2 4485 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 IGLV5-45A0A087WSX0 123 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 IGHV1-58A0A0C4DH39 117 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 USP17L23D6RBM5 183 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 APOMO95445 188 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 S100A2P29034 98 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 COX6A2Q02221 97 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 SPATA12Q7Z6I5 190 aa10.84□□□□□ -0.67
SPTLC2-203ENST00000554901 C5orf52A6NGY3 159 aa10.83□□□□□ -0.68
SPTLC2-203ENST00000554901 F8VRH5 84 aa10.83□□□□□ -0.68
SPTLC2-203ENST00000554901 MALP21145 153 aa10.83□□□□□ -0.68
SPTLC2-203ENST00000554901 SNRPEP62304 92 aaKnown RBP10.83□□□□□ -0.68
SPTLC2-203ENST00000554901 IGLV4-69A0A075B6H9 119 aa10.82□□□□□ -0.68
SPTLC2-203ENST00000554901 ODF1Q14990 250 aa10.82□□□□□ -0.68
SPTLC2-203ENST00000554901 C5orf38Q86SI9 138 aa10.82□□□□□ -0.68
SPTLC2-203ENST00000554901 Q8N814 137 aa10.82□□□□□ -0.68
SPTLC2-203ENST00000554901 CHAC1Q9BUX1 264 aa10.82□□□□□ -0.68
SPTLC2-203ENST00000554901 FRAS1Q86XX4 4008 aa10.82□□□□□ -0.68
SPTLC2-203ENST00000554901 SYS1-DBNDD2H3BUS1 97 aa10.81□□□□□ -0.68
SPTLC2-203ENST00000554901 LECT2O14960 151 aa10.81□□□□□ -0.68
SPTLC2-203ENST00000554901 WFDC2Q14508 124 aa10.81□□□□□ -0.68
SPTLC2-203ENST00000554901 LINC00469Q8N7U9 141 aa10.81□□□□□ -0.68
SPTLC2-203ENST00000554901 C15orf56Q8N910 161 aa10.81□□□□□ -0.68
SPTLC2-203ENST00000554901 CDKN2A-AS1Q9UH64 79 aa10.81□□□□□ -0.68
SPTLC2-203ENST00000554901 GVQW2A0A096LPI5 108 aaPredicted RBP10.8□□□□□ -0.68
SPTLC2-203ENST00000554901 PET117Q6UWS5 81 aa10.8□□□□□ -0.68
SPTLC2-203ENST00000554901 OR10D4PQ8NGN7 298 aa10.8□□□□□ -0.68
SPTLC2-203ENST00000554901 C12orf57Q99622 126 aa10.8□□□□□ -0.68
SPTLC2-203ENST00000554901 HIST1H2BLQ99880 126 aa10.8□□□□□ -0.68
SPTLC2-203ENST00000554901 MRPL35Q9NZE8 188 aaKnown RBP10.8□□□□□ -0.68
SPTLC2-203ENST00000554901 IGHV3-64A0A075B6Q5 118 aa10.79□□□□□ -0.68
SPTLC2-203ENST00000554901 H3BRM9 83 aa10.79□□□□□ -0.68
SPTLC2-203ENST00000554901 NTN5Q8WTR8 489 aaPredicted RBP10.79□□□□□ -0.68
SPTLC2-203ENST00000554901 H0Y8G0 127 aa10.79□□□□□ -0.68
SPTLC2-203ENST00000554901 SMIM6P0DI80 62 aa10.79□□□□□ -0.68
SPTLC2-203ENST00000554901 PLNP26678 52 aa10.79□□□□□ -0.68
SPTLC2-203ENST00000554901 CTAG1AP78358 180 aa10.79□□□□□ -0.68
SPTLC2-203ENST00000554901 FAT2Q9NYQ8 4349 aa10.78□□□□□ -0.68
SPTLC2-203ENST00000554901 A0A1B0GVY2 172 aa10.78□□□□□ -0.68
SPTLC2-203ENST00000554901 C11orf86A6NJI1 115 aa10.78□□□□□ -0.68
SPTLC2-203ENST00000554901 C3orf79P0CE67 100 aa10.78□□□□□ -0.68
SPTLC2-203ENST00000554901 ZNF22P17026 224 aaPredicted RBP10.78□□□□□ -0.68
SPTLC2-203ENST00000554901 PGPEP1Q9NXJ5 209 aa10.78□□□□□ -0.68
SPTLC2-203ENST00000554901 hDV102S1A0JD36 115 aa10.77□□□□□ -0.69
SPTLC2-203ENST00000554901 PCP4L1A6NKN8 68 aa10.77□□□□□ -0.69
SPTLC2-203ENST00000554901 CDPF1Q6NVV7 123 aa10.77□□□□□ -0.69
SPTLC2-203ENST00000554901 ZNF561-AS1K7EIQ3 104 aa10.76□□□□□ -0.69
SPTLC2-203ENST00000554901 DPM2O94777 84 aa10.76□□□□□ -0.69
SPTLC2-203ENST00000554901 KRTDAPP60985 99 aa10.76□□□□□ -0.69
SPTLC2-203ENST00000554901 LINC01545Q5VT33 79 aa10.76□□□□□ -0.69
SPTLC2-203ENST00000554901 ORAOV1Q8WV07 137 aa10.76□□□□□ -0.69
SPTLC2-203ENST00000554901 F8WDY8 70 aa10.75□□□□□ -0.69
SPTLC2-203ENST00000554901 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
SPTLC2-203ENST00000554901 C20orf202A1L168 122 aa10.74□□□□□ -0.69
SPTLC2-203ENST00000554901 SMIM1B2RUZ4 78 aa10.74□□□□□ -0.69
SPTLC2-203ENST00000554901 CNBPP62633 177 aaKnown RBP10.74□□□□□ -0.69
SPTLC2-203ENST00000554901 HIGD2BQ4VC39 106 aa10.74□□□□□ -0.69
SPTLC2-203ENST00000554901 C2orf48Q96LS8 159 aa10.74□□□□□ -0.69
SPTLC2-203ENST00000554901 IGKCP01834 107 aa10.74□□□□□ -0.69
SPTLC2-203ENST00000554901 SPAG11BQ08648 103 aa10.74□□□□□ -0.69
SPTLC2-203ENST00000554901 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.73□□□□□ -0.69
SPTLC2-203ENST00000554901 IGLV5-39A0A0G2JS06 123 aa10.73□□□□□ -0.69
SPTLC2-203ENST00000554901 Q8IZM0 81 aa10.73□□□□□ -0.69
SPTLC2-203ENST00000554901 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.72□□□□□ -0.69
SPTLC2-203ENST00000554901 PRSS2P07478 247 aa10.72□□□□□ -0.69
SPTLC2-203ENST00000554901 KIAA0087Q14695 138 aa10.72□□□□□ -0.69
SPTLC2-203ENST00000554901 IGLV5-52A0A0A0MRZ9 124 aa10.71□□□□□ -0.69
SPTLC2-203ENST00000554901 TMEM223A0PJW6 202 aa10.71□□□□□ -0.69
SPTLC2-203ENST00000554901 SPINK8P0C7L1 97 aa10.71□□□□□ -0.69
SPTLC2-203ENST00000554901 KRTAP10-2P60368 255 aa10.71□□□□□ -0.69
SPTLC2-203ENST00000554901 PMCHL2Q9BQD1 86 aa10.71□□□□□ -0.69
SPTLC2-203ENST00000554901 CXCL5P42830 114 aa10.69□□□□□ -0.7
SPTLC2-203ENST00000554901 C6orf226Q5I0X4 101 aa10.69□□□□□ -0.7
SPTLC2-203ENST00000554901 CAMK2N2Q96S95 79 aa10.69□□□□□ -0.7
SPTLC2-203ENST00000554901 PKD1P98161 4303 aa10.69□□□□□ -0.7
SPTLC2-203ENST00000554901 SLPIP03973 132 aa10.68□□□□□ -0.7
SPTLC2-203ENST00000554901 HERVK_113P61574 105 aa10.68□□□□□ -0.7
SPTLC2-203ENST00000554901 SYCNQ0VAF6 134 aa10.68□□□□□ -0.7
SPTLC2-203ENST00000554901 C9orf163Q8N9P6 203 aa10.68□□□□□ -0.7
SPTLC2-203ENST00000554901 COX7B2Q8TF08 81 aa10.68□□□□□ -0.7
SPTLC2-203ENST00000554901 TOMM7Q9P0U1 55 aa10.68□□□□□ -0.7
SPTLC2-203ENST00000554901 NDUFA1O15239 70 aa10.68□□□□□ -0.7
SPTLC2-203ENST00000554901 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms