RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 PLNP26678 52 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 RPL13AP40429 203 aaKnown RBP3.58□□□□□ -1.84
LINC01550-204ENST00000554822 SEC61GP60059 68 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 RHOHQ15669 191 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 CFAP126Q5VTH2 177 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 Q6ZR54 194 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 BOD1L2Q8IYS8 172 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 LINC01561Q8N1V8 128 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.58□□□□□ -1.84
LINC01550-204ENST00000554822 TMEM263Q8WUH6 116 aaKnown RBP3.58□□□□□ -1.84
LINC01550-204ENST00000554822 ORAOV1Q8WV07 137 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 TMEM141Q96I45 108 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 DNAJC30Q96LL9 226 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 TIMM17AQ99595 171 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 XCL2Q9UBD3 114 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 HHLA3Q9XRX5 114 aa3.58□□□□□ -1.84
LINC01550-204ENST00000554822 STAB2Q8WWQ8 2551 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 IGIPA6NJ69 53 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 E9PLD3 99 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 F8VRH5 84 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 IGHV3-53P01767 116 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 FGF6P10767 208 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 HTN1P15515 57 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 DAZ2Q13117 558 aaKnown RBP3.57□□□□□ -1.84
LINC01550-204ENST00000554822 C12orf54Q6X4T0 127 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 MRPL35Q9NZE8 188 aaKnown RBP3.57□□□□□ -1.84
LINC01550-204ENST00000554822 TP53TG1Q9Y2A0 90 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 MUC2Q02817 5179 aa3.57□□□□□ -1.84
LINC01550-204ENST00000554822 NACAE9PAV3 2078 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 GIG44P09565 113 aaPredicted RBP3.56□□□□□ -1.84
LINC01550-204ENST00000554822 AZU1P20160 251 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 CRYBA4P53673 196 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 PMVKQ15126 192 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 C2orf91Q6ZV80 131 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 NEGR1Q7Z3B1 354 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 C20orf203Q8NBC4 194 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 CSNK1G2-AS1Q8NCQ2 148 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 BAALCQ8WXS3 180 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 C16orf74Q96GX8 76 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 CITED1Q99966 193 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 HIGD1BQ9P298 99 aa3.56□□□□□ -1.84
LINC01550-204ENST00000554822 CHTOPQ9Y3Y2 248 aaKnown RBP3.56□□□□□ -1.84
LINC01550-204ENST00000554822 TRAV4A0A0B4J268 109 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 TRBV10-1A0A0K0K1A3 114 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 PRM2P04554 102 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 P0DMU3 169 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 FAM231AP0DMU4 169 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 FAM231CP0DMU5 169 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 HINT1P49773 126 aaPredicted RBP3.55□□□□□ -1.84
LINC01550-204ENST00000554822 MPV17L2Q567V2 206 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 OR4C5Q8NGB2 326 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 CST9LQ9H4G1 147 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 MRPL16Q9NX20 251 aaKnown RBP3.55□□□□□ -1.84
LINC01550-204ENST00000554822 SORL1Q92673 2214 aa3.55□□□□□ -1.84
LINC01550-204ENST00000554822 IGKV2D-26A0A0A0MRZ7 120 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 TRGV1A0A0A0MS02 117 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 IGHV3-73A0A0B4J1V6 119 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 PLAC8L1A1L4L8 177 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 NMUP48645 174 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 RPL39P62891 51 aaKnown RBP3.54□□□□□ -1.84
LINC01550-204ENST00000554822 SEC11AP67812 179 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 HSD52Q0P140 79 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 BATFQ16520 125 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 RRN3P1Q2M238 152 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 TMEM97Q5BJF2 176 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 BVES-AS1Q5T3Y7 98 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 PCP2Q8IVA1 136 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 WFDC9Q8NEX5 89 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 WFDC10AQ9H1F0 79 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 PPDPFQ9H3Y8 114 aa3.54□□□□□ -1.84
LINC01550-204ENST00000554822 IGLV4-69A0A075B6H9 119 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 TRBV7-3A0A075B6L6 115 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 TRBV6-4A0A1B0GX49 114 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 SMIM9A6NGZ8 99 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 C11orf86A6NJI1 115 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 HERVK_113P61574 105 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 COTL1Q14019 142 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 TAL2Q16559 108 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 Q6ZTI0 123 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 OR11H2Q8NH07 326 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 KIR2DL5BQ8NHK3 375 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 AMELXQ99217 191 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 TIMM21Q9BVV7 248 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 SPANXA1Q9NS26 97 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 DHRS4-AS1Q9P1J3 65 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 TP73-AS1Q9UF72 201 aa3.53□□□□□ -1.84
LINC01550-204ENST00000554822 TRBV25-1A0A075B6N4 114 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 A6NDN8 102 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 K7EP13 123 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 MRPS36P82909 103 aaKnown RBP3.52□□□□□ -1.85
LINC01550-204ENST00000554822 SMAGPQ0VAQ4 97 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 DAZ4Q86SG3 579 aaKnown RBP3.52□□□□□ -1.85
LINC01550-204ENST00000554822 SLC25A29Q8N8R3 303 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 TYMSOSQ8TAI1 123 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 CHCHD7Q9BUK0 85 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 CHAC1Q9BUX1 264 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 NOP10Q9NPE3 64 aaKnown RBP3.52□□□□□ -1.85
LINC01550-204ENST00000554822 DAZ3Q9NR90 486 aaKnown RBP3.52□□□□□ -1.85
LINC01550-204ENST00000554822 Q9UF83 564 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms