RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 IGHV3-30-3P0DP02 117 aa7.99□□□□□ -1.13
SRP54-205ENST00000554803 CMC4P56277 68 aaPredicted RBP7.99□□□□□ -1.13
SRP54-205ENST00000554803 CIRBPQ14011 172 aaKnown RBP7.99□□□□□ -1.13
SRP54-205ENST00000554803 MIAQ16674 131 aa7.99□□□□□ -1.13
SRP54-205ENST00000554803 Q6ZUT4 128 aa7.99□□□□□ -1.13
SRP54-205ENST00000554803 CDIP1Q9H305 208 aa7.99□□□□□ -1.13
SRP54-205ENST00000554803 PKHD1P08F94 4074 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 TRBV10-2A0A0K0K1G8 114 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 H3BMM0 161 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 SPRY2O43597 315 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 INSP01308 110 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 SPINK8P0C7L1 97 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 Q6Q795 121 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 MUSTN1Q8IVN3 82 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 ANKRD29Q8N6D5 301 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 VSIG2Q96IQ7 327 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 CSDC2Q9Y534 153 aaKnown RBP7.98□□□□□ -1.13
SRP54-205ENST00000554803 VPS13DQ5THJ4 4388 aa7.98□□□□□ -1.13
SRP54-205ENST00000554803 TRAV12-2A0A075B6T6 113 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 A0A0J9YXV3 536 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 TRBV10-1A0A0K0K1A3 114 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 FAM240AA0A1B0GVK7 77 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 LY6G6CO95867 125 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 EMP1P54849 157 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 CKS1BP61024 79 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 HERVK_113P63121 156 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 LINC01620Q4KN68 170 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 NDUFA12Q9UI09 145 aa7.97□□□□□ -1.13
SRP54-205ENST00000554803 DNAH6Q9C0G6 4158 aa7.96□□□□□ -1.13
SRP54-205ENST00000554803 NDUFA1O15239 70 aa7.96□□□□□ -1.14
SRP54-205ENST00000554803 RS1O15537 224 aa7.96□□□□□ -1.14
SRP54-205ENST00000554803 Q1RN00 199 aa7.96□□□□□ -1.14
SRP54-205ENST00000554803 DYNLRB2Q8TF09 96 aa7.96□□□□□ -1.14
SRP54-205ENST00000554803 GEMIN7Q9H840 131 aaKnown RBP7.96□□□□□ -1.14
SRP54-205ENST00000554803 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.14
SRP54-205ENST00000554803 UBE2D4Q9Y2X8 147 aa7.96□□□□□ -1.14
SRP54-205ENST00000554803 A8MZ25 164 aa7.95□□□□□ -1.14
SRP54-205ENST00000554803 C9JAW5 83 aa7.95□□□□□ -1.14
SRP54-205ENST00000554803 IGHV4-30-4P0DP06 118 aa7.95□□□□□ -1.14
SRP54-205ENST00000554803 DEFB114Q30KQ6 69 aa7.95□□□□□ -1.14
SRP54-205ENST00000554803 TMEM61Q8N0U2 210 aa7.95□□□□□ -1.14
SRP54-205ENST00000554803 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
SRP54-205ENST00000554803 LITAFQ99732 161 aa7.95□□□□□ -1.14
SRP54-205ENST00000554803 H7C423 109 aa7.94□□□□□ -1.14
SRP54-205ENST00000554803 HERV-K104P63124 156 aa7.94□□□□□ -1.14
SRP54-205ENST00000554803 CHCHD7Q9BUK0 85 aa7.94□□□□□ -1.14
SRP54-205ENST00000554803 ICOSQ9Y6W8 199 aa7.94□□□□□ -1.14
SRP54-205ENST00000554803 IGKV3-20P01619 116 aa7.93□□□□□ -1.14
SRP54-205ENST00000554803 ACYP1P07311 99 aa7.93□□□□□ -1.14
SRP54-205ENST00000554803 DEFB131AP59861 70 aa7.93□□□□□ -1.14
SRP54-205ENST00000554803 DAZ2Q13117 558 aaKnown RBP7.93□□□□□ -1.14
SRP54-205ENST00000554803 DAZ4Q86SG3 579 aaKnown RBP7.93□□□□□ -1.14
SRP54-205ENST00000554803 DAZ3Q9NR90 486 aaKnown RBP7.93□□□□□ -1.14
SRP54-205ENST00000554803 FAT2Q9NYQ8 4349 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 DYNC1H1Q14204 4646 aaKnown RBP7.92□□□□□ -1.14
SRP54-205ENST00000554803 IGLV5-39A0A0G2JS06 123 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 SNCGO76070 127 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 IGLV1-51P01701 117 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 DGAT2L7PQ6IED9 249 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 SFTA2Q6UW10 78 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 C11orf72Q8NBR9 251 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 UBE2WQ96B02 151 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 OVOL2Q9BRP0 275 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 DNAH17Q9UFH2 4485 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 DNAH11Q96DT5 4516 aa7.92□□□□□ -1.14
SRP54-205ENST00000554803 TRAV4A0A0B4J268 109 aa7.91□□□□□ -1.14
SRP54-205ENST00000554803 LST1O00453 97 aa7.91□□□□□ -1.14
SRP54-205ENST00000554803 LINC01587Q99440 93 aa7.91□□□□□ -1.14
SRP54-205ENST00000554803 OPRPNQ99935 248 aaPredicted RBP7.91□□□□□ -1.14
SRP54-205ENST00000554803 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
SRP54-205ENST00000554803 MAP6D1Q9H9H5 199 aa7.91□□□□□ -1.14
SRP54-205ENST00000554803 TRIAP1O43715 76 aa7.9□□□□□ -1.14
SRP54-205ENST00000554803 PRSS2P07478 247 aa7.9□□□□□ -1.14
SRP54-205ENST00000554803 RBMY1A1P0DJD3 496 aaKnown RBP7.9□□□□□ -1.14
SRP54-205ENST00000554803 RBMY1CP0DJD4 496 aa7.9□□□□□ -1.14
SRP54-205ENST00000554803 XGP55808 180 aa7.9□□□□□ -1.14
SRP54-205ENST00000554803 RPL36AP83881 106 aaKnown RBP7.9□□□□□ -1.14
SRP54-205ENST00000554803 RBMY1FQ15415 496 aaKnown RBP7.9□□□□□ -1.14
SRP54-205ENST00000554803 RPL36ALQ969Q0 106 aaKnown RBP7.9□□□□□ -1.14
SRP54-205ENST00000554803 FAM104AQ969W3 186 aa7.9□□□□□ -1.14
SRP54-205ENST00000554803 DNAH2Q9P225 4427 aa7.9□□□□□ -1.15
SRP54-205ENST00000554803 TRAV8-4A0A0B4J246 113 aa7.89□□□□□ -1.15
SRP54-205ENST00000554803 KNCNA6PVL3 124 aa7.89□□□□□ -1.15
SRP54-205ENST00000554803 C2orf82Q6UX34 121 aa7.89□□□□□ -1.15
SRP54-205ENST00000554803 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
SRP54-205ENST00000554803 MT-ATP8P03928 68 aa7.88□□□□□ -1.15
SRP54-205ENST00000554803 GAGE2BQ13066 116 aa7.88□□□□□ -1.15
SRP54-205ENST00000554803 GAGE2EQ4V326 116 aa7.88□□□□□ -1.15
SRP54-205ENST00000554803 FAM222AQ5U5X8 452 aa7.88□□□□□ -1.15
SRP54-205ENST00000554803 NTN5Q8WTR8 489 aaPredicted RBP7.88□□□□□ -1.15
SRP54-205ENST00000554803 GAGE2DQ9UEU5 116 aa7.88□□□□□ -1.15
SRP54-205ENST00000554803 HERC1Q15751 4861 aa7.88□□□□□ -1.15
SRP54-205ENST00000554803 ODF3L2Q3SX64 289 aa7.87□□□□□ -1.15
SRP54-205ENST00000554803 IMUPQ9GZP8 106 aa7.87□□□□□ -1.15
SRP54-205ENST00000554803 RETNQ9HD89 108 aa7.87□□□□□ -1.15
SRP54-205ENST00000554803 IGHV3-64A0A075B6Q5 118 aa7.86□□□□□ -1.15
SRP54-205ENST00000554803 TRAV26-1A0A087WT03 109 aa7.86□□□□□ -1.15
SRP54-205ENST00000554803 K7EQD1 137 aa7.86□□□□□ -1.15
SRP54-205ENST00000554803 COX7A2LO14548 114 aa7.86□□□□□ -1.15
SRP54-205ENST00000554803 TRACP01848 142 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms