RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CRYBG3Q68DQ2 2970 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 A0A087WWL8 130 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 LINC00959A0A1B0GUT2 108 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 SYNJ2BPP57105 145 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 BATFQ16520 125 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 LINC00526Q96FQ7 95 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 PDE4DIPQ5VU43 2346 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 TRAV8-4A0A0B4J246 113 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 ATP5J2P56134 94 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 ETDBQ3ZM63 59 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 ASB16-AS1Q495Z4 193 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 UBE2WQ96B02 151 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 A0A1B0GV72 72 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 COX7B2Q8TF08 81 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 ABCA4P78363 2273 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 IGKV2-29A2NJV5 120 aaPredicted RBP2.31□□□□□ -2.04
SEC23A-207ENST00000554615 CD164L2Q6UWJ8 174 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 TMEM126AQ9H061 195 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 GPR179Q6PRD1 2367 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 MXRA5Q9NR99 2828 aa2.31□□□□□ -2.04
SEC23A-207ENST00000554615 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.31□□□□□ -2.042e-6■□□□□ 8.2
SEC23A-207ENST00000554615 IGLV5-48A0A075B6I7 105 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 TRAV12-2A0A075B6T6 113 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 TRAV8-3A0A0A6YYJ7 113 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 KNCNA6PVL3 124 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 CCKP06307 115 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 NTN5Q8WTR8 489 aaPredicted RBP2.3□□□□□ -2.04
SEC23A-207ENST00000554615 TACC2O95359 2948 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 DOPEY2Q9Y3R5 2298 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 CCL24O00175 119 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 CCL18P55774 89 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 DEFB131AP59861 70 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 SRSF9Q13242 221 aaKnown RBP eCLIP2.3□□□□□ -2.04
SEC23A-207ENST00000554615 Q6ZQT0 140 aa2.3□□□□□ -2.04
SEC23A-207ENST00000554615 MGPP08493 103 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 CXCL6P80162 114 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 TMEM243Q9BU79 118 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 IGLV4-60A0A075B6I1 120 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 PAX4O43316 350 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 SCGB1C2P0DMR2 95 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 MIFP14174 115 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 MALP21145 153 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 ZNF56Q15929 161 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 LINC00575Q6W349 94 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 Q6ZTI0 123 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 TNFRSF18Q9Y5U5 241 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 EP300Q09472 2414 aaPredicted RBP2.29□□□□□ -2.04
SEC23A-207ENST00000554615 IGHV3OR16-8A0A075B7F1 116 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 S100A4P26447 101 aaKnown RBP2.29□□□□□ -2.04
SEC23A-207ENST00000554615 ELOF1P60002 83 aaKnown RBP2.29□□□□□ -2.04
SEC23A-207ENST00000554615 C9orf129Q5T035 196 aaKnown RBP2.29□□□□□ -2.04
SEC23A-207ENST00000554615 SMIM11BQ8TCY0 68 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 RAB37Q96AX2 223 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 STARD9Q9P2P6 4700 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 TENM4Q6N022 2769 aa2.29□□□□□ -2.04
SEC23A-207ENST00000554615 TEX49A0A1B0GTD5 131 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 SPRR1BP22528 89 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 RPL36AP83881 106 aaKnown RBP2.28□□□□□ -2.04
SEC23A-207ENST00000554615 LELP1Q5T871 98 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 KRTAP7-1Q8IUC3 87 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 Q8N814 137 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 RPL36ALQ969Q0 106 aaKnown RBP2.28□□□□□ -2.04
SEC23A-207ENST00000554615 LINC00527Q9UJ94 153 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.28□□□□□ -2.04
SEC23A-207ENST00000554615 SPINK8P0C7L1 97 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 INAFM2P0DMQ5 153 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 PSMB2P49721 201 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 SCGB2A2Q13296 93 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 LY6EQ16553 131 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 MEIG1Q5JSS6 88 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 ZCCHC13Q8WW36 166 aaKnown RBP2.28□□□□□ -2.04
SEC23A-207ENST00000554615 FBN3Q75N90 2809 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 IGHV3-49A0A0A0MS15 119 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 CKS1BP61024 79 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 GAGE5Q13069 117 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 GAGE6Q13070 117 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 CEMP1Q6PRD7 247 aaPredicted RBP2.28□□□□□ -2.04
SEC23A-207ENST00000554615 SPRR4Q96PI1 79 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 DUX5Q96PT3 197 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 KCNQ1DNQ9H478 68 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 SH3BGRL2Q9UJC5 107 aa2.28□□□□□ -2.04
SEC23A-207ENST00000554615 A0A087WYN8 130 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 H0Y9J4 135 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 VPREB1P12018 145 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 ENHOQ6UWT2 76 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 NAA38Q9BRA0 125 aaKnown RBP2.27□□□□□ -2.05
SEC23A-207ENST00000554615 POLEQ07864 2286 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 UTP20O75691 2785 aaKnown RBP2.27□□□□□ -2.05
SEC23A-207ENST00000554615 MED13LQ71F56 2210 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 LOC107984640A0A0U1RRK4 108 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 DNAH10OSP0CZ25 163 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 KLKP1Q107X0 134 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 LINC00528Q8N1L1 170 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 C3orf22Q8N5N4 141 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 C15orf56Q8N910 161 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 DUX3Q96PT4 197 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 GEMIN7Q9H840 131 aaKnown RBP2.27□□□□□ -2.05
SEC23A-207ENST00000554615 Q9H8V8 135 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 TIMM8BQ9Y5J9 83 aaPredicted RBP2.27□□□□□ -2.05
SEC23A-207ENST00000554615 PDE6GP18545 87 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms